TomoSeq data search

Data search

Results for MligTC455_47612

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_47612	12518	260.79	Mlig455_002625, Mlig455_066137	Neo: - Age: - Regeneration-enriched R5: 3.777 Regeneration-enriched R3: 3.396 Regeneration-enriched BL: 3.208 Regeneration-enriched R2: 3.114 Regeneration-enriched R4: 3.065 Regeneration-enriched R6: 2.947 Regeneration-enriched TP: 2.501		Mlig455_002625 {REF} {Length: 3451} {Pfam: Dynein light chain type 1 [PF01221.20, score=52.2]; EF hand [PF00036.34, score=42.9]; EF-hand domain [PF13405.8, score=30.9]; EF-hand domain pair [PF13499.8, score=30.9]; EF hand [PF13202.8, score=28.5]; EF-hand domain pair [PF13833.8, score=23.8]} {Smed: dd_Smed_v6_6707_0_3, dd_Smed_v6_6707_0_3, [Score=135, Expect=7e-41]} {RNA1509_12760, RNA1509_20734, RNA1509_38280} {RNA1310_13493.1, RNA1509_12760, RNA1509_20734, RNA1509_38280} {RNA1509_12760, RNA1509_20734, RNA1509_38280, RNA815_12385} Mlig455_066137 {REF} {Length: 457} {NoTransDecoderORF} {RNA1509_50397} {RNA1310_23428.1} {RNA815_29721}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_47612

12518

260.79

Mlig455_002625, Mlig455_066137

Neo: -

Age: -

Regeneration-enriched R5: 3.777
Regeneration-enriched R3: 3.396
Regeneration-enriched BL: 3.208
Regeneration-enriched R2: 3.114
Regeneration-enriched R4: 3.065
Regeneration-enriched R6: 2.947
Regeneration-enriched TP: 2.501

Mlig455_002625 {REF} {Length: 3451} {Pfam: Dynein light chain type 1 [PF01221.20, score=52.2]; EF hand [PF00036.34, score=42.9]; EF-hand domain [PF13405.8, score=30.9]; EF-hand domain pair [PF13499.8, score=30.9]; EF hand [PF13202.8, score=28.5]; EF-hand domain pair [PF13833.8, score=23.8]} {Smed: dd_Smed_v6_6707_0_3, dd_Smed_v6_6707_0_3, [Score=135, Expect=7e-41]} {RNA1509_12760, RNA1509_20734, RNA1509_38280} {RNA1310_13493.1, RNA1509_12760, RNA1509_20734, RNA1509_38280} {RNA1509_12760, RNA1509_20734, RNA1509_38280, RNA815_12385}

Mlig455_066137 {REF} {Length: 457} {NoTransDecoderORF} {RNA1509_50397} {RNA1310_23428.1} {RNA815_29721}

Cumulative graph for MligTC455_47612

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.863	7.974	0.03140	0.45011
RegionR2	-1.054	7.974	0.03865	0.22821
RegionR3	0.097	7.974	0.81598	1.00000
RegionR4	0.695	7.974	0.14041	0.38269
RegionR5	-0.203	7.974	0.62847	0.98159
RegionR6	0.761	7.974	0.05317	0.43158
RegionR7	0.88	7.974	0.03361	0.34898
RegionR8	0.688	7.974	0.14926	0.70265

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	3.874	7.974	0.00001	0.01295
RegenerationR2	3.114	7.974	0.00000	0.00001
RegenerationR3	3.396	7.974	0.00000	0.00000
RegenerationR4	3.065	7.974	0.00000	0.00001
RegenerationR5	3.777	7.974	0.00000	0.00000
RegenerationR6	2.947	7.974	0.00000	0.00003
RegenerationBL	3.208	7.974	0.00000	0.00000
RegenerationTP	2.501	7.974	0.00000	0.00006

Genes with expression patterns similar to MligTC455_47612

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_47612	12518	260.79	Mlig455_002625, Mlig455_066137	Neo: - Age: - Regeneration-enriched R5: 3.777 Regeneration-enriched R3: 3.396 Regeneration-enriched BL: 3.208 Regeneration-enriched R2: 3.114 Regeneration-enriched R4: 3.065 Regeneration-enriched R6: 2.947 Regeneration-enriched TP: 2.501		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_002625 {REF} {Length: 3451} {Pfam: Dynein light chain type 1 [PF01221.20, score=52.2]; EF hand [PF00036.34, score=42.9]; EF-hand domain [PF13405.8, score=30.9]; EF-hand domain pair [PF13499.8, score=30.9]; EF hand [PF13202.8, score=28.5]; EF-hand domain pair [PF13833.8, score=23.8]} {Smed: dd_Smed_v6_6707_0_3, dd_Smed_v6_6707_0_3, [Score=135, Expect=7e-41]} {RNA1509_12760, RNA1509_20734, RNA1509_38280} {RNA1310_13493.1, RNA1509_12760, RNA1509_20734, RNA1509_38280} {RNA1509_12760, RNA1509_20734, RNA1509_38280, RNA815_12385} Mlig455_066137 {REF} {Length: 457} {NoTransDecoderORF} {RNA1509_50397} {RNA1310_23428.1} {RNA815_29721}
2.	MligTC455_25509	26793	558.19	Mlig455_025772, Mlig455_064419	Neo: Int S/G2/M Age: Down-Up-Down, logFC(26M/2M)=1.947	RPS23	1.809	-	-	-	0.852	0.957	-	Mlig455_025772 {REF} {Length: 576} {TRANSSPLICED} {Pfam: Ribosomal protein S12/S23 [PF00164.27, score=173.9]} {Human: ENSG00000186468, RPS23, ribosomal protein S23, [RH, Score=256, Expect=7e-89]} {Mouse: ENSMUSG00000049517, Rps23, ribosomal protein S23, [RH, Score=256, Expect=5e-89]} {Dmel: FBgn0033912, RpS23, Ribosomal protein S23, [RH, Score=257, Expect=1e-89]} {Celegans: WBGene00004492, rps-23, 40S ribosomal protein S23, [RH, Score=260, Expect=5e-91]} {Smed: dd_Smed_v6_290_0_1, dd_Smed_v6_290_0_1, [RH, Score=259, Expect=2e-90]} {RNA1509_6690} {RNA1310_17173.2} {RNA815_25860.2} Mlig455_064419 {REF} {Length: 576} {TRANSSPLICED} {Pfam: Ribosomal protein S12/S23 [PF00164.27, score=173.9]} {Human: ENSG00000186468, RPS23, ribosomal protein S23, [RH, Score=256, Expect=7e-89]} {Mouse: ENSMUSG00000049517, Rps23, ribosomal protein S23, [RH, Score=256, Expect=5e-89]} {Dmel: FBgn0033912, RpS23, Ribosomal protein S23, [RH, Score=257, Expect=1e-89]} {Celegans: WBGene00004492, rps-23, 40S ribosomal protein S23, [RH, Score=260, Expect=5e-91]} {Smed: dd_Smed_v6_290_0_1, dd_Smed_v6_290_0_1, [RH, Score=259, Expect=2e-90]} {RNA1509_6690} {RNA1310_17173.2, RNA1509_6690} {RNA1509_6690, RNA815_25860.2}
3.	MligTC455_25508	13673	284.84	Mlig455_025743	Neo: - Age: Down-Down-Up	RPS23	1.802	-	-	-	0.845	0.957	-	Mlig455_025743 {REF} {Length: 576} {TRANSSPLICED} {Pfam: Ribosomal protein S12/S23 [PF00164.27, score=173.9]} {Human: ENSG00000186468, RPS23, ribosomal protein S23, [RH, Score=256, Expect=7e-89]} {Mouse: ENSMUSG00000049517, Rps23, ribosomal protein S23, [RH, Score=256, Expect=5e-89]} {Dmel: FBgn0033912, RpS23, Ribosomal protein S23, [RH, Score=257, Expect=1e-89]} {Celegans: WBGene00004492, rps-23, 40S ribosomal protein S23, [RH, Score=260, Expect=5e-91]} {Smed: dd_Smed_v6_290_0_1, dd_Smed_v6_290_0_1, [RH, Score=259, Expect=2e-90]} {RNA1509_1523, RNA1509_412} {RNA1310_17173.1, RNA1509_1523, RNA1509_412} {RNA1509_1523, RNA1509_412, RNA815_25860.2}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_47612

12518

260.79

Mlig455_002625, Mlig455_066137

Neo: -

Age: -

1.000

Mlig455_066137 {REF} {Length: 457} {NoTransDecoderORF} {RNA1509_50397} {RNA1310_23428.1} {RNA815_29721}

MligTC455_25509

26793

558.19

Mlig455_025772, Mlig455_064419

Neo: Int S/G2/M

Age: Down-Up-Down, logFC(26M/2M)=1.947

RPS23

1.809

0.852

0.957

Mlig455_025772 {REF} {Length: 576} {TRANSSPLICED} {Pfam: Ribosomal protein S12/S23 [PF00164.27, score=173.9]} {Human: ENSG00000186468, RPS23, ribosomal protein S23, [RH, Score=256, Expect=7e-89]} {Mouse: ENSMUSG00000049517, Rps23, ribosomal protein S23, [RH, Score=256, Expect=5e-89]} {Dmel: FBgn0033912, RpS23, Ribosomal protein S23, [RH, Score=257, Expect=1e-89]} {Celegans: WBGene00004492, rps-23, 40S ribosomal protein S23, [RH, Score=260, Expect=5e-91]} {Smed: dd_Smed_v6_290_0_1, dd_Smed_v6_290_0_1, [RH, Score=259, Expect=2e-90]} {RNA1509_6690} {RNA1310_17173.2} {RNA815_25860.2}

Mlig455_064419 {REF} {Length: 576} {TRANSSPLICED} {Pfam: Ribosomal protein S12/S23 [PF00164.27, score=173.9]} {Human: ENSG00000186468, RPS23, ribosomal protein S23, [RH, Score=256, Expect=7e-89]} {Mouse: ENSMUSG00000049517, Rps23, ribosomal protein S23, [RH, Score=256, Expect=5e-89]} {Dmel: FBgn0033912, RpS23, Ribosomal protein S23, [RH, Score=257, Expect=1e-89]} {Celegans: WBGene00004492, rps-23, 40S ribosomal protein S23, [RH, Score=260, Expect=5e-91]} {Smed: dd_Smed_v6_290_0_1, dd_Smed_v6_290_0_1, [RH, Score=259, Expect=2e-90]} {RNA1509_6690} {RNA1310_17173.2, RNA1509_6690} {RNA1509_6690, RNA815_25860.2}

MligTC455_25508

13673

284.84

Mlig455_025743

Neo: -

Age: Down-Down-Up

RPS23

1.802

0.845

0.957

Mlig455_025743 {REF} {Length: 576} {TRANSSPLICED} {Pfam: Ribosomal protein S12/S23 [PF00164.27, score=173.9]} {Human: ENSG00000186468, RPS23, ribosomal protein S23, [RH, Score=256, Expect=7e-89]} {Mouse: ENSMUSG00000049517, Rps23, ribosomal protein S23, [RH, Score=256, Expect=5e-89]} {Dmel: FBgn0033912, RpS23, Ribosomal protein S23, [RH, Score=257, Expect=1e-89]} {Celegans: WBGene00004492, rps-23, 40S ribosomal protein S23, [RH, Score=260, Expect=5e-91]} {Smed: dd_Smed_v6_290_0_1, dd_Smed_v6_290_0_1, [RH, Score=259, Expect=2e-90]} {RNA1509_1523, RNA1509_412} {RNA1310_17173.1, RNA1509_1523, RNA1509_412} {RNA1509_1523, RNA1509_412, RNA815_25860.2}