TomoSeq data search

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Results for MligTC455_25509

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_25509

26793

558.19

Mlig455_025772, Mlig455_064419

Neo: Int S/G2/M

Age: Down-Up-Down, logFC(26M/2M)=1.947

RPS23

Mlig455_025772 {REF} {Length: 576} {TRANSSPLICED} {Pfam: Ribosomal protein S12/S23 [PF00164.27, score=173.9]} {Human: ENSG00000186468, RPS23, ribosomal protein S23, [RH, Score=256, Expect=7e-89]} {Mouse: ENSMUSG00000049517, Rps23, ribosomal protein S23, [RH, Score=256, Expect=5e-89]} {Dmel: FBgn0033912, RpS23, Ribosomal protein S23, [RH, Score=257, Expect=1e-89]} {Celegans: WBGene00004492, rps-23, 40S ribosomal protein S23, [RH, Score=260, Expect=5e-91]} {Smed: dd_Smed_v6_290_0_1, dd_Smed_v6_290_0_1, [RH, Score=259, Expect=2e-90]} {RNA1509_6690} {RNA1310_17173.2} {RNA815_25860.2}

Mlig455_064419 {REF} {Length: 576} {TRANSSPLICED} {Pfam: Ribosomal protein S12/S23 [PF00164.27, score=173.9]} {Human: ENSG00000186468, RPS23, ribosomal protein S23, [RH, Score=256, Expect=7e-89]} {Mouse: ENSMUSG00000049517, Rps23, ribosomal protein S23, [RH, Score=256, Expect=5e-89]} {Dmel: FBgn0033912, RpS23, Ribosomal protein S23, [RH, Score=257, Expect=1e-89]} {Celegans: WBGene00004492, rps-23, 40S ribosomal protein S23, [RH, Score=260, Expect=5e-91]} {Smed: dd_Smed_v6_290_0_1, dd_Smed_v6_290_0_1, [RH, Score=259, Expect=2e-90]} {RNA1509_6690} {RNA1310_17173.2, RNA1509_6690} {RNA1509_6690, RNA815_25860.2}

Cumulative graph for MligTC455_25509

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.742	9.21	0.01376	0.33098
RegionR2	-0.63	9.21	0.00895	0.09414
RegionR3	0.415	9.21	0.03843	0.34139
RegionR4	0.798	9.21	0.00029	0.00393
RegionR5	0.458	9.21	0.01896	0.09326
RegionR6	0.018	9.21	0.93103	1.00000
RegionR7	0.194	9.21	0.33266	0.96762
RegionR8	-0.511	9.21	0.02769	0.32468

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.959	9.21	0.01453	0.50967
RegenerationR2	-0.498	9.21	0.05587	0.38930
RegenerationR3	-0.689	9.21	0.00927	0.17564
RegenerationR4	-0.444	9.21	0.09967	0.48979
RegenerationR5	-0.428	9.21	0.10322	0.48749
RegenerationR6	-0.314	9.21	0.23622	0.58370
RegenerationBL	-0.198	9.21	0.38725	0.75563
RegenerationTP	-0.262	9.21	0.29315	0.73822

Genes with expression patterns similar to MligTC455_25509

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_25509	26793	558.19	Mlig455_025772, Mlig455_064419	Neo: Int S/G2/M Age: Down-Up-Down, logFC(26M/2M)=1.947	RPS23	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_025772 {REF} {Length: 576} {TRANSSPLICED} {Pfam: Ribosomal protein S12/S23 [PF00164.27, score=173.9]} {Human: ENSG00000186468, RPS23, ribosomal protein S23, [RH, Score=256, Expect=7e-89]} {Mouse: ENSMUSG00000049517, Rps23, ribosomal protein S23, [RH, Score=256, Expect=5e-89]} {Dmel: FBgn0033912, RpS23, Ribosomal protein S23, [RH, Score=257, Expect=1e-89]} {Celegans: WBGene00004492, rps-23, 40S ribosomal protein S23, [RH, Score=260, Expect=5e-91]} {Smed: dd_Smed_v6_290_0_1, dd_Smed_v6_290_0_1, [RH, Score=259, Expect=2e-90]} {RNA1509_6690} {RNA1310_17173.2} {RNA815_25860.2} Mlig455_064419 {REF} {Length: 576} {TRANSSPLICED} {Pfam: Ribosomal protein S12/S23 [PF00164.27, score=173.9]} {Human: ENSG00000186468, RPS23, ribosomal protein S23, [RH, Score=256, Expect=7e-89]} {Mouse: ENSMUSG00000049517, Rps23, ribosomal protein S23, [RH, Score=256, Expect=5e-89]} {Dmel: FBgn0033912, RpS23, Ribosomal protein S23, [RH, Score=257, Expect=1e-89]} {Celegans: WBGene00004492, rps-23, 40S ribosomal protein S23, [RH, Score=260, Expect=5e-91]} {Smed: dd_Smed_v6_290_0_1, dd_Smed_v6_290_0_1, [RH, Score=259, Expect=2e-90]} {RNA1509_6690} {RNA1310_17173.2, RNA1509_6690} {RNA1509_6690, RNA815_25860.2}
2.	MligTC455_25508	13673	284.84	Mlig455_025743	Neo: - Age: Down-Down-Up	RPS23	5.97	0.998	0.999	0.987	0.999	0.999	0.988	Mlig455_025743 {REF} {Length: 576} {TRANSSPLICED} {Pfam: Ribosomal protein S12/S23 [PF00164.27, score=173.9]} {Human: ENSG00000186468, RPS23, ribosomal protein S23, [RH, Score=256, Expect=7e-89]} {Mouse: ENSMUSG00000049517, Rps23, ribosomal protein S23, [RH, Score=256, Expect=5e-89]} {Dmel: FBgn0033912, RpS23, Ribosomal protein S23, [RH, Score=257, Expect=1e-89]} {Celegans: WBGene00004492, rps-23, 40S ribosomal protein S23, [RH, Score=260, Expect=5e-91]} {Smed: dd_Smed_v6_290_0_1, dd_Smed_v6_290_0_1, [RH, Score=259, Expect=2e-90]} {RNA1509_1523, RNA1509_412} {RNA1310_17173.1, RNA1509_1523, RNA1509_412} {RNA1509_1523, RNA1509_412, RNA815_25860.2}
3.	MligTC455_30185	7960	165.83	Mlig455_046355	Neo: Int S/G2/M Age: -	RPL5	2.429	0.742	0.730	-	-	-	0.957	Mlig455_046355 {REF} {Length: 1085} {TRANSSPLICED} {Pfam: Ribosomal large subunit proteins 60S L5, and 50S L18 [PF17144.6, score=292.2]; Ribosomal L18 C-terminal region [PF14204.8, score=66.8]} {Human: ENSG00000122406, RPL5, ribosomal protein L5, [RH, Score=379, Expect=3e-132]} {Mouse: ENSMUSG00000058558, Rpl5, ribosomal protein L5, [RH, Score=363, Expect=2e-126]} {Dmel: FBgn0064225, RpL5, Ribosomal protein L5, [RH, Score=395, Expect=6e-139]} {Celegans: WBGene00004416, rpl-5, 60S ribosomal protein L5, [RH, Score=324, Expect=4e-111]} {Smed: dd_Smed_v6_151_0_1, dd_Smed_v6_151_0_1, [RH, Score=341, Expect=4e-118]} {RNA1509_10191, RNA1509_24181, RNA1509_3149} {RNA1310_31746.1, RNA1509_10191, RNA1509_24181, RNA1509_3149} {RNA1509_10191, RNA1509_24181, RNA1509_3149, RNA815_10534.1}
4.	MligTC455_47612	12518	260.79	Mlig455_002625, Mlig455_066137	Neo: - Age: - Regeneration-enriched R5: 3.777 Regeneration-enriched R3: 3.396 Regeneration-enriched BL: 3.208 Regeneration-enriched R2: 3.114 Regeneration-enriched R4: 3.065 Regeneration-enriched R6: 2.947 Regeneration-enriched TP: 2.501		1.809	-	-	-	0.852	0.957	-	Mlig455_002625 {REF} {Length: 3451} {Pfam: Dynein light chain type 1 [PF01221.20, score=52.2]; EF hand [PF00036.34, score=42.9]; EF-hand domain [PF13405.8, score=30.9]; EF-hand domain pair [PF13499.8, score=30.9]; EF hand [PF13202.8, score=28.5]; EF-hand domain pair [PF13833.8, score=23.8]} {Smed: dd_Smed_v6_6707_0_3, dd_Smed_v6_6707_0_3, [Score=135, Expect=7e-41]} {RNA1509_12760, RNA1509_20734, RNA1509_38280} {RNA1310_13493.1, RNA1509_12760, RNA1509_20734, RNA1509_38280} {RNA1509_12760, RNA1509_20734, RNA1509_38280, RNA815_12385} Mlig455_066137 {REF} {Length: 457} {NoTransDecoderORF} {RNA1509_50397} {RNA1310_23428.1} {RNA815_29721}
5.	MligTC455_30184	20964	436.75	Mlig455_037696	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.195	RPL5	0.956	-	-	-	-	-	0.956	Mlig455_037696 {REF} {Length: 1029} {TRANSSPLICED} {Pfam: Ribosomal large subunit proteins 60S L5, and 50S L18 [PF17144.6, score=251.5]; Ribosomal L18 C-terminal region [PF14204.8, score=66.9]} {Human: ENSG00000122406, RPL5, ribosomal protein L5, [Score=350, Expect=2e-121]} {Mouse: ENSMUSG00000058558, Rpl5, ribosomal protein L5, [Score=335, Expect=9e-116]} {Dmel: FBgn0064225, RpL5, Ribosomal protein L5, [Score=371, Expect=8e-130]} {Celegans: WBGene00004416, rpl-5, 60S ribosomal protein L5, [Score=307, Expect=8e-105]} {Smed: dd_Smed_v6_151_0_1, dd_Smed_v6_151_0_1, [RH, Score=333, Expect=4e-115]} {RNA1509_3634} {RNA1310_31746.1} {RNA815_10534.1}

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