Data search


search
Exact
Search

Results for MligTC455_25643

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_25643 32 0.66 Mlig455_011333

Neo: -

Age: -

Regeneration-downregulated R4: -7.180

Regeneration-depleted R4: -7.180

Mlig455_011333 {REF} {Length: 1535} {NoTransDecoderORF} {RNA1509_1087} {RNA1310_46928} {RNA815_29322}

Cumulative graph for MligTC455_25643

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 5.284 0.879 0.99963 1.00000
RegionR2 -2.092 0.879 0.99611 1.00000
RegionR3 -0.939 0.879 0.97890 1.00000
RegionR4 4.879 0.879 0.03308 0.14563
RegionR5 -0.865 0.879 0.97508 1.00000
RegionR6 -2.862 0.879 0.99903 1.00000
RegionR7 0.404 0.879 0.83291 1.00000
RegionR8 -3.809 0.879 0.99961 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -7.954 0.879 0.99985 1.00000
RegenerationR2 -1.989 0.879 0.03175 0.29236
RegenerationR3 -5.615 0.879 0.00014 0.01446
RegenerationR4 -7.18 0.879 0.00000 0.00025 Specific for R4: -7.180
RegenerationR5 -5.475 0.879 0.00008 0.01177
RegenerationR6 -2.64 0.879 0.07514 0.34273
RegenerationBL 0.582 0.879 0.95306 1.00000
RegenerationTP -4.835 0.879 0.99981 1.00000


Genes with expression patterns similar to MligTC455_25643

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_25643 32 0.66 Mlig455_011333

Neo: -

Age: -

Regeneration-downregulated R4: -7.180

Regeneration-depleted R4: -7.180

2 - - 1.000 - 1.000 - Mlig455_011333 {REF} {Length: 1535} {NoTransDecoderORF} {RNA1509_1087} {RNA1310_46928} {RNA815_29322}
2. MligTC455_13715 49 1.03 Mlig455_000810

Neo: -

Age: Down-Up-Down

CETN2 1.694 - - 0.954 - 0.740 - Mlig455_000810 {REF} {Length: 852} {Pfam: EF-hand domain pair [PF13499.8, score=36.4]; EF hand [PF00036.34, score=34.7]; EF-hand domain [PF13405.8, score=33.7]; EF-hand domain pair [PF13833.8, score=26.0]; EF hand [PF13202.8, score=19.9]} {Human: ENSG00000147400, CETN2, centrin 2, [Score=57.0, Expect=5e-10]; ENSG00000143933, CALM2, calmodulin 2, [Score=56.6, Expect=8e-10]; ENSG00000160014, CALM3, calmodulin 3, [Score=56.6, Expect=2e-10]; ENSG00000198668, CALM1, calmodulin 1, [Score=56.6, Expect=2e-10]; ENSG00000177143, CETN1, centrin 1, [Score=55.1, Expect=2e-09]} {Mouse: ENSMUSG00000050996, Cetn1, centrin 1, [Score=63.2, Expect=2e-12]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=58.2, Expect=5e-11]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=58.5, Expect=1e-11]} {Smed: dd_Smed_v6_414_0_1, dd_Smed_v6_414_0_1, [Score=58.2, Expect=3e-11]} {RNA1310_39411} {RNA815_27208}
3. MligTC455_31251 13 0.26 Mlig455_044314

Neo: Irradiation

Age: -

GABBR2 0.996 - - - - 0.996 - Mlig455_044314 {REF} {Length: 2984} {Pfam: 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=134.4]; Receptor family ligand binding region [PF01094.30, score=96.6]} {Human: ENSG00000136928, GABBR2, gamma-aminobutyric acid type B receptor subunit 2, [Score=165, Expect=5e-41]} {Mouse: ENSMUSG00000039809, Gabbr2, gamma-aminobutyric acid (GABA) B receptor, 2, [Score=164, Expect=5e-41]} {Dmel: FBgn0027575, GABA-B-R2, metabotropic GABA-B receptor subtype 2, [Score=157, Expect=6e-39]} {Celegans: WBGene00022675, gbb-2, GABA B receptor subunit; GABAB2 receptor subunit, [Score=140, Expect=5e-34]} {Smed: dd_Smed_v6_59890_0_1, dd_Smed_v6_59890_0_1, [Score=78.2, Expect=2e-16]} {RNA1509_26993} {RNA1310_7927.1} {RNA815_4866.1}
4. MligTC455_40624 40 0.83 Mlig455_051690

Neo: -

Age: -

0.987 - - - - 0.987 - Mlig455_051690 {REF} {Length: 1138} {NoTransDecoderORF} {RNA1310_134365} {RNA815_53922}
5. MligTC455_14622 59 1.23 Mlig455_012377, Mlig455_012796

Neo: -

Age: Up-Down-Down

IRF2BP2 0.986 - - - - 0.986 -

Mlig455_012377 {REF} {Length: 2731} {TRANSSPLICED} {Pfam: Interferon regulatory factor 2-binding protein zinc finger [PF11261.10, score=99.2]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=21.4]} {Human: ENSG00000168264, IRF2BP2, interferon regulatory factor 2 binding protein 2, [RH, Score=98.2, Expect=4e-21]; ENSG00000119669, IRF2BPL, interferon regulatory factor 2 binding protein like, [RH, Score=97.8, Expect=7e-21]; ENSG00000170604, IRF2BP1, interferon regulatory factor 2 binding protein 1, [RH, Score=94.4, Expect=7e-20]} {Mouse: ENSMUSG00000051495, Irf2bp2, interferon regulatory factor 2 binding protein 2, [RH, Score=98.2, Expect=3e-21]; ENSMUSG00000034168, Irf2bpl, interferon regulatory factor 2 binding protein-like, [RH, Score=97.8, Expect=5e-21]; ENSMUSG00000044030, Irf2bp1, interferon regulatory factor 2 binding protein 1, [RH, Score=94.7, Expect=4e-20]} {Dmel: FBgn0030400, CG11138, [RH, Score=103, Expect=5e-23]} {Celegans: WBGene00010867, tag-260, [RH, Score=102, Expect=5e-23]} {Smed: dd_Smed_v6_18245_0_1, dd_Smed_v6_18245_0_1, [RH, Score=183, Expect=8e-52]} {RNA1310_58279.1} {RNA815_43124}

Mlig455_012796 {REF} {Length: 2721} {TRANSSPLICED} {Pfam: Interferon regulatory factor 2-binding protein zinc finger [PF11261.10, score=98.9]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=20.8]} {Human: ENSG00000168264, IRF2BP2, interferon regulatory factor 2 binding protein 2, [RH, Score=99.8, Expect=2e-21]; ENSG00000119669, IRF2BPL, interferon regulatory factor 2 binding protein like, [RH, Score=99.0, Expect=4e-21]; ENSG00000170604, IRF2BP1, interferon regulatory factor 2 binding protein 1, [RH, Score=95.1, Expect=5e-20]} {Mouse: ENSMUSG00000034168, Irf2bpl, interferon regulatory factor 2 binding protein-like, [RH, Score=99.4, Expect=2e-21]; ENSMUSG00000051495, Irf2bp2, interferon regulatory factor 2 binding protein 2, [RH, Score=99.4, Expect=1e-21]; ENSMUSG00000044030, Irf2bp1, interferon regulatory factor 2 binding protein 1, [RH, Score=95.5, Expect=3e-20]} {Dmel: FBgn0030400, CG11138, [RH, Score=103, Expect=3e-23]} {Celegans: WBGene00010867, tag-260, [RH, Score=103, Expect=2e-23]} {Smed: dd_Smed_v6_18245_0_1, dd_Smed_v6_18245_0_1, [RH, Score=189, Expect=2e-53]} {RNA1310_60081} {RNA815_43124}
6. MligTC455_37349 17 0.35 Mlig455_024850

Neo: -

Age: -

0.986 - - - - 0.986 - Mlig455_024850 {REF} {Length: 1247} {Pfam: RNase H [PF00075.26, score=20.7]} {RNA1509_53488} {RNA1310_124588}
7. MligTC455_02799 17 0.36 Mlig455_000495

Neo: -

Age: -

0.984 - - - - 0.984 - Mlig455_000495 {REF} {Length: 1355} {Pfam: RNase H [PF00075.26, score=54.7]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=24.6]; Reverse transcriptase-like [PF13456.8, score=19.5]} {RNA1509_53488} {RNA1310_124588}
8. MligTC455_08067 17 0.36 Mlig455_000434

Neo: -

Age: -

0.984 - - - - 0.984 - Mlig455_000434 {REF} {Length: 1283} {Pfam: RNase H [PF00075.26, score=46.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=18.6]} {RNA1509_53488} {RNA1310_124588}
9. MligTC455_08196 64 1.33 Mlig455_025661

Neo: -

Age: -

0.974 - - - - 0.974 - Mlig455_025661 {REF} {Length: 2327} {TRANSSPLICED} {Pfam: SAM dependent carboxyl methyltransferase [PF03492.17, score=122.2]} {RNA1509_57863} {RNA1310_33171.1} {RNA815_29973}
10. MligTC455_18962 688 14.32 Mlig455_027929

Neo: -

Age: -

0.973 - - - - 0.973 - Mlig455_027929 {REF} {Length: 1285} {RNA1509_18336} {RNA1310_16542.1, RNA1509_18336} {RNA1509_18336, RNA815_28056}
11. MligTC455_57200 6 0.12 Mlig455_019328

Neo: -

Age: -

0.971 - - - - 0.971 - Mlig455_019328 {REF} {Length: 424} {NoTransDecoderORF}
12. MligTC455_52443 19 0.4 Mlig455_058564

Neo: -

Age: -

0.97 - - - - 0.970 - Mlig455_058564 {REF} {Length: 2584} {RNA1310_86967}
13. MligTC455_09756 22 0.45 Mlig455_039618, Mlig455_051420

Neo: -

Age: -

0.968 - - 0.968 - - -

Mlig455_039618 {REF} {Length: 250} {NoTransDecoderORF} {RNA1509_27178} {RNA1310_42116} {RNA815_36714}

Mlig455_051420 {REF} {Length: 379} {NoTransDecoderORF} {RNA1509_27178} {RNA1310_42116} {RNA815_36714}
14. MligTC455_36555 40 0.84 Mlig455_027790, Mlig455_063458

Neo: -

Age: -

Region-enriched R4: 7.080/0.02387

0.968 - - 0.968 - - -

Mlig455_027790 {REF} {Length: 3034} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=20.8]} {RNA1509_20583} {RNA1310_17633} {RNA815_8151}

Mlig455_063458 {REF} {Length: 3182} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=20.8]} {RNA1509_20583} {RNA1310_17633} {RNA815_8151}
15. MligTC455_30574 55 1.15 Mlig455_037904

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.438

ANKRD17 0.966 - - 0.966 - - - Mlig455_037904 {REF} {Length: 5609} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=145.2]; Ankyrin repeats (many copies) [PF13637.8, score=125.4]; Ankyrin repeat [PF13606.8, score=84.0]; Ankyrin repeats (many copies) [PF13857.8, score=83.2]; Ankyrin repeat [PF00023.32, score=67.3]; Transcription factor BRX N-terminal domain [PF13713.8, score=36.3]; Tc3 transposase [PF11427.10, score=23.1]; Protein of unknown function (DUF3307) [PF11750.10, score=19.5]; Topo homolgy domain in CRISPR-associated endonuclease Cas9 [PF17894.3, score=19.5]} {Human: ENSG00000132466, ANKRD17, ankyrin repeat domain 17, [Score=107, Expect=1e-23]} {Mouse: ENSMUSG00000055204, Ankrd17, ankyrin repeat domain 17, [Score=108, Expect=6e-24]} {Dmel: FBgn0039590, CG10011, [Score=77.8, Expect=2e-14]} {Celegans: WBGene00012124, T28D6.4, [Score=82.8, Expect=3e-16]} {Smed: dd_Smed_v6_5303_0_2, dd_Smed_v6_5303_0_2, [Score=94.7, Expect=4e-20]} {RNA1509_25948} {RNA1310_30238.1} {RNA815_12459}
16. MligTC455_10681 18 0.37 Mlig455_045012

Neo: -

Age: -

0.965 - - - - 0.965 - Mlig455_045012 {REF} {Length: 573} {RNA1509_59553} {RNA1310_127391} {RNA815_4400}
17. MligTC455_40012 77 1.61 Mlig455_048982, Mlig455_048998

Neo: -

Age: -

0.965 - - 0.965 - - -

Mlig455_048982 {REF} {Length: 1661} {Pfam: Methyltransferase FkbM domain [PF05050.14, score=27.6]} {Smed: dd_Smed_v6_12148_0_2, dd_Smed_v6_12148_0_2, [RH, Score=110, Expect=1e-28]} {RNA1509_11901} {RNA1310_32645} {RNA815_18926}

Mlig455_048998 {REF} {Length: 1942} {Smed: dd_Smed_v6_12148_0_2, dd_Smed_v6_12148_0_2, [Score=94.4, Expect=4e-23]} {RNA1509_11901} {RNA1310_32645} {RNA815_18926}
18. MligTC455_54629 8 0.16 Mlig455_057657

Neo: -

Age: -

0.964 - - - - 0.964 - Mlig455_057657 {REF} {Length: 149} {NoTransDecoderORF} {RNA1509_30517} {RNA1310_5647.1}
19. MligTC455_11675 17 0.35 Mlig455_066692

Neo: -

Age: -

0.963 - - - - 0.963 - Mlig455_066692 {REF} {Length: 152} {NoTransDecoderORF} {RNA1509_13206} {RNA1310_17473} {RNA815_11267}
20. MligTC455_35689 141 2.93 Mlig455_038912, Mlig455_038916

Neo: -

Age: -

0.961 - - 0.961 - - -

Mlig455_038912 {REF} {Length: 2218} {TRANSSPLICED} {RNA1509_23775} {RNA1310_4560.1} {RNA815_21752}

Mlig455_038916 {REF} {Length: 895} {RNA1310_25647.1} {RNA815_12358}
21. MligTC455_39487 163 3.4 Mlig455_016534

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.614

0.961 - - - - 0.961 - Mlig455_016534 {REF} {Length: 2067} {TRANSSPLICED} {RNA1509_28528} {RNA1310_28586} {RNA815_21057}
22. MligTC455_37602 11 0.23 Mlig455_049973

Neo: -

Age: Up-Down-Down

PRR9 0.96 - - 0.960 - - - Mlig455_049973 {REF} {Length: 1124} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=47.8, Expect=5e-07]} {RNA1310_41607} {RNA815_54630}
23. MligTC455_01656 16 0.33 Mlig455_040666

Neo: -

Age: -

0.958 - - - - 0.958 - Mlig455_040666 {REF} {Length: 985} {RNA1509_48613} {RNA1310_29425} {RNA815_35012}
24. MligTC455_03449 11 0.24 Mlig455_066657

Neo: -

Age: -

SCNN1B 0.958 - - - - 0.958 - Mlig455_066657 {REF} {Length: 2141} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=195.5]} {Human: ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [Score=80.1, Expect=5e-15]} {Mouse: ENSMUSG00000030873, Scnn1b, sodium channel, nonvoltage-gated 1 beta, [Score=58.5, Expect=2e-08]} {Celegans: WBGene00012116, del-4, DEgenerin Like, [Score=81.6, Expect=5e-16]} {Smed: dd_Smed_v6_34707_0_1, dd_Smed_v6_34707_0_1, [Score=117, Expect=2e-27]} {RNA1310_36738} {RNA815_32966}
25. MligTC455_16738 11 0.24 Mlig455_041783

Neo: -

Age: -

0.957 - - 0.957 - - - Mlig455_041783 {REF} {Length: 1090} {NoTransDecoderORF} {RNA1310_115744}
26. MligTC455_35154 1576 32.84 Mlig455_032963, Mlig455_063984

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=1.509

TSPAN18 0.957 - - - - 0.957 -

Mlig455_032963 {REF} {Length: 278} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=22.0]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=58.9, Expect=1e-11]} {RNA1509_43848} {RNA1310_1928.2} {RNA815_1581}

Mlig455_063984 {REF} {Length: 1905} {Pfam: Tetraspanin family [PF00335.22, score=81.5]} {Human: ENSG00000157570, TSPAN18, tetraspanin 18, [Score=51.2, Expect=6e-07]; ENSG00000130167, TSPAN16, tetraspanin 16, [Score=49.7, Expect=2e-06]} {Dmel: FBgn0029508, Tsp42Ea, Tetraspanin 42Ea, [Score=46.6, Expect=9e-06]} {Celegans: WBGene00006633, tsp-7, Tetraspanin, [Score=58.9, Expect=4e-10]} {Smed: dd_Smed_v6_546_0_1, dd_Smed_v6_546_0_1, [RH, Score=70.5, Expect=4e-14]} {RNA1509_2681} {RNA1310_15134.2} {RNA815_5522.1}
27. MligTC455_36078 21 0.44 Mlig455_032513

Neo: -

Age: -

0.957 - - 0.957 - - - Mlig455_032513 {REF} {Length: 503} {NoTransDecoderORF} {RNA1509_45539} {RNA1310_77014} {RNA815_40738}
28. MligTC455_37021 331 6.9 Mlig455_043498

Neo: -

Age: -

Region-enriched R2: 2.237/0.04921

CYP2R1 0.957 - - 0.957 - - - Mlig455_043498 {REF} {Length: 969} {Pfam: Cytochrome P450 [PF00067.24, score=220.9]} {Human: ENSG00000186104, CYP2R1, cytochrome P450 family 2 subfamily R member 1, [RH, Score=174, Expect=2e-53]} {Mouse: ENSMUSG00000030670, Cyp2r1, cytochrome P450, family 2, subfamily r, polypeptide 1, [RH, Score=176, Expect=4e-54]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [Score=158, Expect=5e-45]} {Celegans: WBGene00016686, cyp-33C1, CYtochrome P450 family, [Score=162, Expect=6e-47]} {Smed: dd_Smed_v6_2351_0_1, dd_Smed_v6_2351_0_1, [Score=197, Expect=2e-60]} {RNA1509_30782} {RNA1310_15020} {RNA815_24722}
29. MligTC455_29987 30 0.62 Mlig455_027920

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.504

MAP3K4 0.955 - - 0.955 - - - Mlig455_027920 {REF} {Length: 2615} {Pfam: Protein kinase domain [PF00069.27, score=143.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=115.4]; Ankyrin repeats (3 copies) [PF12796.9, score=80.3]; Ankyrin repeat [PF00023.32, score=54.4]; Ankyrin repeat [PF13606.8, score=51.8]; Ankyrin repeats (many copies) [PF13857.8, score=50.1]; Ankyrin repeats (many copies) [PF13637.8, score=46.8]; Fungal protein kinase [PF17667.3, score=23.1]} {Human: ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=120, Expect=2e-27]; ENSG00000180815, MAP3K15, mitogen-activated protein kinase kinase kinase 15, [Score=120, Expect=1e-27]; ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=118, Expect=2e-27]} {Mouse: ENSMUSG00000031303, Map3k15, mitogen-activated protein kinase kinase kinase 15, [Score=120, Expect=1e-27]; ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=117, Expect=3e-27]; ENSMUSG00000014426, Map3k4, mitogen-activated protein kinase kinase kinase 4, [Score=115, Expect=4e-26]} {Dmel: FBgn0024329, Mekk1, [Score=128, Expect=3e-30]} {Celegans: WBGene00003472, mtk-1, MTK1/MEKK4 homolog, [Score=119, Expect=2e-27]} {Smed: dd_Smed_v6_5192_0_1, dd_Smed_v6_5192_0_1, [Score=106, Expect=1e-25]} {RNA1509_27731} {RNA1310_29331} {RNA815_11425}
30. MligTC455_38152 19 0.39 Mlig455_037918

Neo: -

Age: -

0.955 - - - - 0.955 - Mlig455_037918 {REF} {Length: 1280} {Pfam: Phospholipase A2 [PF00068.21, score=80.2]} {Mouse: ENSMUSG00000058908, Pla2g2a, phospholipase A2, group IIA (platelets, synovial fluid), [RH, Score=60.1, Expect=2e-11]} {Celegans: WBGene00007419, C07E3.9, Phospholipase A(2), [RH, Score=66.2, Expect=7e-14]} {RNA1310_94430}
31. MligTC455_40693 166 3.46 Mlig455_017943

Neo: -

Age: -

Region-enriched R2: 3.430/0.03329

TRPM3 0.954 - - 0.954 - - - Mlig455_017943 {REF} {Length: 6086} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=111.4]; Ankyrin repeat [PF13606.8, score=75.1]; Ankyrin repeats (many copies) [PF13637.8, score=74.8]; Ankyrin repeats (many copies) [PF13857.8, score=71.1]; Ankyrin repeat [PF00023.32, score=62.4]; Ion transport protein [PF00520.33, score=27.7]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=94.4, Expect=2e-18]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=93.2, Expect=3e-18]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=90.1, Expect=2e-17]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=87.8, Expect=8e-17]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=85.5, Expect=3e-16]} {Smed: dd_Smed_v6_10717_0_1, dd_Smed_v6_10717_0_1, [Score=105, Expect=1e-22]} {RNA1509_10217} {RNA1310_680, RNA1509_10217} {RNA1509_10217, RNA815_2721}
32. MligTC455_41975 116 2.42 Mlig455_014673, Mlig455_014749

Neo: Int S/G2/M

Age: -

Regeneration-upregulated BL: 5.975

Regeneration-enriched BL: 5.975

0.954 - - 0.954 - - -

Mlig455_014673 {REF} {Length: 1863} {TRANSSPLICED} {RNA1509_24925} {RNA1310_24888, RNA1509_24925} {RNA1509_24925, RNA815_14473}

Mlig455_014749 {REF} {Length: 2269} {TRANSSPLICED} {RNA1509_24925, RNA1509_46410} {RNA1310_24888, RNA1509_46410} {RNA1509_46410, RNA815_14473}
33. MligTC455_24843 412 8.59 Mlig455_014713

Neo: -

Age: -

Region-enriched R8: 3.552/0.00000

TRPM1 0.952 - - - - 0.952 - Mlig455_014713 {REF} {Length: 8336} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=172.4]; Ankyrin repeats (many copies) [PF13637.8, score=126.4]; Ankyrin repeats (many copies) [PF13857.8, score=55.0]; Ankyrin repeat [PF13606.8, score=47.8]; Domain of unknown function (DUF4158) [PF13700.8, score=41.7]; Ankyrin repeat [PF00023.32, score=35.7]; RlmM ferredoxin-like domain [PF18125.3, score=24.8]; HMGL-like [PF00682.21, score=22.8]; Ion transport protein [PF00520.33, score=20.3]} {Human: ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=90.9, Expect=2e-17]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=90.9, Expect=2e-17]; ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=88.2, Expect=1e-16]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=91.7, Expect=8e-18]; ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=90.1, Expect=3e-17]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=73.2, Expect=2e-12]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=65.5, Expect=4e-10]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=116, Expect=5e-26]} {RNA1509_6015} {RNA1310_1769} {RNA815_7984}
34. MligTC455_35153 6628 138.09 Mlig455_035972, Mlig455_047634

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.329

Region-enriched R8: 1.701/0.00319

AF241726.2 0.952 - - - - 0.952 -

Mlig455_035972 {REF} {Length: 1946} {Pfam: Tetraspanin family [PF00335.22, score=107.2]} {Human: ENSG00000250349, AF241726.2, novel proline rich Gla (G-carboxyglutamic acid) 1 (PRRG1) and tetraspanin 7 (TSPAN7) protein, [Score=59.3, Expect=1e-09]; ENSG00000130167, TSPAN16, tetraspanin 16, [Score=58.5, Expect=1e-09]; ENSG00000156298, TSPAN7, tetraspanin 7, [Score=58.5, Expect=2e-09]} {Mouse: ENSMUSG00000058254, Tspan7, tetraspanin 7, [Score=58.5, Expect=9e-10]; ENSMUSG00000025351, Cd63, CD63 antigen, [Score=58.2, Expect=1e-09]} {Dmel: FBgn0020372, TM4SF, Transmembrane 4 superfamily, [RH, Score=48.5, Expect=3e-06]} {Celegans: WBGene00006633, tsp-7, Tetraspanin, [Score=70.1, Expect=5e-14]} {Smed: dd_Smed_v6_546_0_1, dd_Smed_v6_546_0_1, [RH, Score=72.0, Expect=8e-15]} {RNA1509_20707, RNA1509_2681, RNA1509_28721, RNA1509_29848, RNA1509_31530} {RNA1310_15134.2, RNA1509_20707, RNA1509_2681, RNA1509_28721, RNA1509_29848, RNA1509_31530} {RNA1509_20707, RNA1509_2681, RNA1509_28721, RNA1509_29848, RNA1509_31530, RNA815_5522.1}

Mlig455_047634 {REF} {Length: 1948} {Pfam: Tetraspanin family [PF00335.22, score=107.2]} {Human: ENSG00000250349, AF241726.2, novel proline rich Gla (G-carboxyglutamic acid) 1 (PRRG1) and tetraspanin 7 (TSPAN7) protein, [Score=59.3, Expect=1e-09]; ENSG00000130167, TSPAN16, tetraspanin 16, [Score=58.5, Expect=1e-09]; ENSG00000156298, TSPAN7, tetraspanin 7, [Score=58.5, Expect=2e-09]} {Mouse: ENSMUSG00000058254, Tspan7, tetraspanin 7, [Score=58.5, Expect=9e-10]; ENSMUSG00000025351, Cd63, CD63 antigen, [Score=58.2, Expect=1e-09]} {Dmel: FBgn0020372, TM4SF, Transmembrane 4 superfamily, [RH, Score=48.5, Expect=3e-06]} {Celegans: WBGene00006633, tsp-7, Tetraspanin, [Score=70.1, Expect=5e-14]} {Smed: dd_Smed_v6_546_0_1, dd_Smed_v6_546_0_1, [RH, Score=72.0, Expect=8e-15]} {RNA1509_2681} {RNA1310_15134.2} {RNA815_5522.1}
35. MligTC455_36814 22 0.46 Mlig455_057650

Neo: -

Age: logFC(26M/2M)=-0.758

Region-enriched R2: 7.107/0.01468

TRPM1 0.952 - - 0.952 - - - Mlig455_057650 {REF} {Length: 5582} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=93.5]; Ankyrin repeats (many copies) [PF13637.8, score=71.4]; Ankyrin repeats (many copies) [PF13857.8, score=52.7]; Ankyrin repeat [PF13606.8, score=42.4]; Ankyrin repeat [PF00023.32, score=23.6]} {Human: ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=79.3, Expect=6e-14]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=79.3, Expect=5e-14]; ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=77.4, Expect=2e-13]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=80.9, Expect=1e-14]; ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=78.6, Expect=6e-14]} {Dmel: FBgn0016920, nompC, no mechanoreceptor potential C, [Score=67.4, Expect=1e-10]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=74.7, Expect=6e-13]} {Smed: dd_Smed_v6_13669_0_1, dd_Smed_v6_13669_0_1, [Score=84.3, Expect=4e-16]} {RNA1509_30268} {RNA1310_2381} {RNA815_861}
36. MligTC455_41957 50 1.04 Mlig455_045094

Neo: -

Age: -

0.952 - - - - 0.952 - Mlig455_045094 {REF} {Length: 716} {NoTransDecoderORF} {RNA1310_81641}
37. MligTC455_09167 9 0.18 Mlig455_024953

Neo: -

Age: -

0.951 - - - - 0.951 - Mlig455_024953 {REF} {Length: 1146} {NoTransDecoderORF} {RNA1310_45015}
38. MligTC455_30575 30 0.62 Mlig455_038999

Neo: -

Age: -

0.951 - - 0.951 - - - Mlig455_038999 {REF} {Length: 1377} {Pfam: PAN domain [PF00024.28, score=21.3]} {RNA1509_48973} {RNA1310_53414} {RNA815_46038}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA