TomoSeq data search

Data search

Results for MligTC455_25867

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_25867

56

1.17

Mlig455_003076

Neo: -

Age: -

Region-enriched R5: 2.808/0.04122

FBXO4

Mlig455_003076 {REF} {Length: 2441} {Pfam: F-box-like [PF12937.9, score=51.0]; F-box domain [PF00646.35, score=37.9]} {Human: ENSG00000151876, FBXO4, F-box protein 4, [RH, Score=124, Expect=2e-31]} {Mouse: ENSMUSG00000022184, Fbxo4, F-box protein 4, [RH, Score=126, Expect=2e-32]} {Smed: dd_Smed_v6_5616_0_1, dd_Smed_v6_5616_0_1, [RH, Score=135, Expect=2e-36]} {RNA1509_39963} {RNA1310_16512} {RNA815_5224}

Cumulative graph for MligTC455_25867

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.129	1.56	1.00000	1.00000
RegionR2	0.469	1.56	0.58778	0.94235
RegionR3	1.344	1.56	0.27319	0.81737
RegionR4	0.087	1.56	0.70791	0.99439
RegionR5	2.808	1.56	0.00629	0.04122
RegionR6	2.144	1.56	0.08237	0.53046
RegionR7	-2.864	1.56	0.99979	1.00000
RegionR8	-2.859	1.56	0.99978	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.612	1.56	0.99996	1.00000
RegenerationR2	0.492	1.56	0.61073	0.91976
RegenerationR3	0.714	1.56	0.50834	0.86010
RegenerationR4	2.187	1.56	0.08743	0.46468
RegenerationR5	0.394	1.56	0.63313	0.92349
RegenerationR6	-0.934	1.56	0.37882	0.72023
RegenerationBL	4.107	1.56	0.01733	0.14036
RegenerationTP	3.861	1.56	0.14823	0.57224

Genes with expression patterns similar to MligTC455_25867

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_25867	56	1.17	Mlig455_003076	Neo: - Age: - Region-enriched R5: 2.808/0.04122	FBXO4	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_003076 {REF} {Length: 2441} {Pfam: F-box-like [PF12937.9, score=51.0]; F-box domain [PF00646.35, score=37.9]} {Human: ENSG00000151876, FBXO4, F-box protein 4, [RH, Score=124, Expect=2e-31]} {Mouse: ENSMUSG00000022184, Fbxo4, F-box protein 4, [RH, Score=126, Expect=2e-32]} {Smed: dd_Smed_v6_5616_0_1, dd_Smed_v6_5616_0_1, [RH, Score=135, Expect=2e-36]} {RNA1509_39963} {RNA1310_16512} {RNA815_5224}
2.	MligTC455_21318	344	7.16	Mlig455_015064	Neo: - Age: -	CORO1B	0.958	-	-	0.958	-	-	-	Mlig455_015064 {REF} {Length: 2240} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF1899) [PF08953.13, score=110.7]; Type of WD40 repeat [PF16300.7, score=70.7]; WD domain, G-beta repeat [PF00400.34, score=24.5]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=20.7]} {Human: ENSG00000172725, CORO1B, coronin 1B, [RH, Score=495, Expect=7e-171]; ENSG00000167549, CORO6, coronin 6, [RH, Score=489, Expect=1e-168]; ENSG00000110880, CORO1C, coronin 1C, [RH, Score=476, Expect=1e-163]} {Mouse: ENSMUSG00000097771, Coro1b, coronin, actin binding protein 1B, [RH, Score=496, Expect=2e-171]; ENSMUSG00000024835, Coro1b, coronin, actin binding protein 1B, [RH, Score=496, Expect=2e-171]; ENSMUSG00000020836, Coro6, coronin 6, [RH, Score=483, Expect=2e-166]; ENSMUSG00000004530, Coro1c, coronin, actin binding protein 1C, [RH, Score=475, Expect=2e-163]} {Dmel: FBgn0265935, coro, [RH, Score=484, Expect=4e-166]} {Celegans: WBGene00000768, cor-1, Coronin-like protein cor-1, [RH, Score=421, Expect=7e-142]} {Smed: dd_Smed_v6_448_0_1, dd_Smed_v6_448_0_1, [RH, Score=527, Expect=0.0]} {RNA1509_12118, RNA1509_13178} {RNA1310_15704, RNA1509_12118, RNA1509_13178} {RNA1509_12118, RNA1509_13178, RNA815_5917}
3.	MligTC455_04136	90	1.88	Mlig455_054352, Mlig455_065734	Neo: - Age: - Region-enriched R4: 3.832/0.00294 Region-enriched R5: 2.508/0.02788		0.951	-	0.951	-	-	-	-	Mlig455_054352 {REF} {Length: 822} {TRANSSPLICED} {Pfam: Deoxynucleoside kinase [PF01712.21, score=74.2]; AAA domain [PF13238.8, score=26.1]; Thymidylate kinase [PF02223.19, score=25.4]; AAA domain [PF13671.8, score=24.0]; AAA domain [PF13521.8, score=20.4]} {Dmel: FBgn0022338, dnk, deoxyribonucleoside kinase, [Score=59.3, Expect=3e-10]} {RNA1310_49770} {RNA815_37152} Mlig455_065734 {REF} {Length: 832} {TRANSSPLICED} {Pfam: Deoxynucleoside kinase [PF01712.21, score=74.2]; AAA domain [PF13238.8, score=26.1]; Thymidylate kinase [PF02223.19, score=25.4]; AAA domain [PF13671.8, score=24.0]; AAA domain [PF13521.8, score=20.4]} {Dmel: FBgn0022338, dnk, deoxyribonucleoside kinase, [Score=59.3, Expect=3e-10]} {RNA1310_49770} {RNA815_37152}
4.	MligTC455_35898	50	1.03	Mlig455_046691	Neo: Int S/G2/M Age: -	GLRA2	0.951	-	-	0.951	-	-	-	Mlig455_046691 {REF} {Length: 3431} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=156.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=117.4]} {Human: ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=295, Expect=3e-92]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=293, Expect=8e-92]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=288, Expect=9e-90]; ENSG00000188828, GLRA4, glycine receptor alpha 4, [Score=283, Expect=3e-88]} {Mouse: ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=293, Expect=4e-92]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=293, Expect=2e-91]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=287, Expect=9e-90]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=285, Expect=6e-89]} {Dmel: FBgn0004244, Rdl, Resistant to dieldrin, [RH, Score=339, Expect=8e-108]} {Celegans: WBGene00017389, lgc-38, Ligand-Gated ion Channel, [RH, Score=319, Expect=4e-102]} {Smed: dd_Smed_v6_25116_0_1, dd_Smed_v6_25116_0_1, [Score=260, Expect=6e-79]} {RNA1509_44454} {RNA1310_46886} {RNA815_31553}

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