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Results for MligTC455_25964

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_25964 197 4.09 Mlig455_028174

Neo: -

Age: -

 SF3B1 Mlig455_028174 {REF} {Length: 3928} {Pfam: Splicing factor 3B subunit 1 [PF08920.12, score=132.4]; HEAT repeat [PF02985.24, score=43.5]; HEAT-like repeat [PF13513.8, score=38.9]; HEAT repeats [PF13646.8, score=32.4]} {Human: ENSG00000115524, SF3B1, splicing factor 3b subunit 1, [RH, Score=1743, Expect=0.0]} {Mouse: ENSMUSG00000025982, Sf3b1, splicing factor 3b, subunit 1, [RH, Score=1743, Expect=0.0]} {Dmel: FBgn0031266, Sf3b1, Splicing factor 3b subunit 1, [RH, Score=1741, Expect=0.0]} {Celegans: WBGene00011605, sftb-1, Splicing Factor ThreeB (3b) Subunit homolog, [RH, Score=1610, Expect=0.0]} {Smed: dd_Smed_v6_2797_0_1, dd_Smed_v6_2797_0_1, [RH, Score=1605, Expect=0.0]} {RNA1509_34519} {RNA1310_989.1} {RNA815_553}

Cumulative graph for MligTC455_25964

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.402 2.662 0.86624 1.00000
RegionR2 0.681 2.662 0.35708 0.75148
RegionR3 -0.286 2.662 0.67406 1.00000
RegionR4 0.851 2.662 0.20367 0.48474
RegionR5 0.43 2.662 0.41202 0.77131
RegionR6 -0.585 2.662 0.43014 0.99421
RegionR7 -0.506 2.662 0.64719 1.00000
RegionR8 -0.183 2.662 0.89220 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -4.734 2.662 0.46898 1.00000
RegenerationR2 -0.375 2.662 0.44513 0.84327
RegenerationR3 0.778 2.662 0.18794 0.62328
RegenerationR4 -0.612 2.662 0.26680 0.71405
RegenerationR5 -0.14 2.662 0.76704 0.97807
RegenerationR6 1.206 2.662 0.05338 0.28942
RegenerationBL 1.962 2.662 0.00874 0.09261
RegenerationTP 0.779 2.662 0.44738 0.86563


Genes with expression patterns similar to MligTC455_25964

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_25964 197 4.09 Mlig455_028174

Neo: -

Age: -

 SF3B1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_028174 {REF} {Length: 3928} {Pfam: Splicing factor 3B subunit 1 [PF08920.12, score=132.4]; HEAT repeat [PF02985.24, score=43.5]; HEAT-like repeat [PF13513.8, score=38.9]; HEAT repeats [PF13646.8, score=32.4]} {Human: ENSG00000115524, SF3B1, splicing factor 3b subunit 1, [RH, Score=1743, Expect=0.0]} {Mouse: ENSMUSG00000025982, Sf3b1, splicing factor 3b, subunit 1, [RH, Score=1743, Expect=0.0]} {Dmel: FBgn0031266, Sf3b1, Splicing factor 3b subunit 1, [RH, Score=1741, Expect=0.0]} {Celegans: WBGene00011605, sftb-1, Splicing Factor ThreeB (3b) Subunit homolog, [RH, Score=1610, Expect=0.0]} {Smed: dd_Smed_v6_2797_0_1, dd_Smed_v6_2797_0_1, [RH, Score=1605, Expect=0.0]} {RNA1509_34519} {RNA1310_989.1} {RNA815_553}
2. MligTC455_46382 432 8.99 Mlig455_054911, Mlig455_065626

Neo: -

Age: -

 RBFOX2 1.882 - - - - 0.953 0.929

Mlig455_054911 {REF} {Length: 2087} {RNA1509_52851} {RNA1310_5883.1} {RNA815_53617}

Mlig455_065626 {REF} {Length: 2546} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=63.6]} {Human: ENSG00000277564, RBFOX2, RNA binding fox-1 homolog 2, [Score=139, Expect=8e-39]; ENSG00000100320, RBFOX2, RNA binding fox-1 homolog 2, [Score=139, Expect=8e-39]; ENSG00000078328, RBFOX1, RNA binding fox-1 homolog 1, [Score=135, Expect=2e-38]} {Mouse: ENSMUSG00000033565, Rbfox2, RNA binding protein, fox-1 homolog (C. elegans) 2, [Score=139, Expect=4e-39]; ENSMUSG00000008658, Rbfox1, RNA binding protein, fox-1 homolog (C. elegans) 1, [Score=136, Expect=1e-37]} {Dmel: FBgn0052062, Rbfox1, RNA-binding Fox protein 1, [Score=127, Expect=6e-34]} {Celegans: WBGene00011279, asd-1, RNA-binding protein ASD-1, [Score=112, Expect=2e-29]} {Smed: dd_Smed_v6_9461_0_1, dd_Smed_v6_9461_0_1, [Score=139, Expect=3e-39]} {RNA1509_52851} {RNA1310_5883.1} {RNA815_34912}
3. MligTC455_46853 1015 21.14 Mlig455_008239

Neo: Int S/G2/M

Age: -

 PARP1 1.74 - - - 0.782 - 0.958 Mlig455_008239 {REF} {Length: 4204} {TRANSSPLICED} {Pfam: Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=228.3]; Poly(ADP-ribose) polymerase, regulatory domain [PF02877.16, score=159.5]; Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region [PF00645.20, score=118.9]; PADR1 (NUC008) domain [PF08063.14, score=76.0]; WGR domain [PF05406.17, score=68.4]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=21.5]} {Human: ENSG00000143799, PARP1, poly(ADP-ribose) polymerase 1, [RH, Score=889, Expect=0.0]} {Mouse: ENSMUSG00000026496, Parp1, poly (ADP-ribose) polymerase family, member 1, [RH, Score=882, Expect=0.0]} {Dmel: FBgn0010247, Parp, Poly-(ADP-ribose) polymerase, [RH, Score=764, Expect=0.0]} {Celegans: WBGene00004049, parp-1, Poly(ADP-ribose) polymerase pme-1, [RH, Score=359, Expect=1e-108]} {Smed: dd_Smed_v6_10338_0_1, dd_Smed_v6_10338_0_1, [RH, Score=775, Expect=0.0]} {RNA1509_7493} {RNA1310_3513, RNA1509_7493} {RNA1509_7493, RNA815_1904}
4. MligTC455_41434 736 15.32 Mlig455_034800

Neo: Irradiation

Age: -

 1.688 - - - - 0.711 0.977 Mlig455_034800 {REF} {Length: 2333} {TRANSSPLICED} {RNA1509_11589, RNA1509_43191, RNA1509_54049} {RNA1310_26849.1, RNA1509_11589, RNA1509_43191, RNA1509_54049} {RNA1509_11589, RNA1509_43191, RNA1509_54049, RNA815_11952}
5. MligTC455_41433 747 15.57 Mlig455_034788

Neo: -

Age: logFC(26M/2M)=0.306

 0.973 - - - - - 0.973 Mlig455_034788 {REF} {Length: 2395} {TRANSSPLICED} {RNA1509_34318, RNA1509_43191, RNA1509_49378} {RNA1310_26849.1, RNA1509_34318, RNA1509_49378} {RNA1509_34318, RNA1509_49378, RNA815_11952}
6. MligTC455_31736 229 4.77 Mlig455_005581

Neo: -

Age: -

 AC006059.2 0.971 - - - - - 0.971 Mlig455_005581 {REF} {Length: 3051} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4164) [PF13747.8, score=18.9]} {Human: ENSG00000280571, AC006059.2, novel transcript, [Score=165, Expect=1e-42]; ENSG00000244607, CCDC13, coiled-coil domain containing 13, [Score=164, Expect=2e-42]} {Mouse: ENSMUSG00000079235, Ccdc13, coiled-coil domain containing 13, [Score=142, Expect=3e-35]} {Smed: dd_Smed_v6_12055_0_1, dd_Smed_v6_12055_0_1, [Score=162, Expect=7e-43]} {RNA1509_34806} {RNA1310_11271} {RNA815_3539}
7. MligTC455_43795 837 17.43 Mlig455_017342

Neo: -

Age: logFC(26M/2M)=-0.242

 0.969 - - - - 0.969 - Mlig455_017342 {REF} {Length: 4372} {RNA1509_16184} {RNA1310_21121} {RNA815_4280.1}
8. MligTC455_21403 312 6.51 Mlig455_004043

Neo: -

Age: logFC(26M/2M)=0.530

 SLC38A10 0.965 - - - - - 0.965 Mlig455_004043 {REF} {Length: 2367} {TRANSSPLICED} {Pfam: Transmembrane amino acid transporter protein [PF01490.20, score=175.6]; Tryptophan/tyrosine permease family [PF03222.15, score=30.3]} {Human: ENSG00000157637, SLC38A10, solute carrier family 38 member 10, [RH, Score=290, Expect=8e-85]} {Mouse: ENSMUSG00000061306, Slc38a10, solute carrier family 38, member 10, [RH, Score=300, Expect=5e-89]} {Dmel: FBgn0050394, CG30394, [RH, Score=249, Expect=9e-72]} {Celegans: WBGene00021765, Y51F10.4, [RH, Score=206, Expect=6e-58]} {Smed: dd_Smed_v6_11525_0_1, dd_Smed_v6_11525_0_1, [RH, Score=216, Expect=1e-63]} {RNA1509_30902} {RNA1310_4708.1, RNA1509_30902} {RNA1509_30902, RNA815_535.1}
9. MligTC455_27659 84 1.74 Mlig455_018407

Neo: -

Age: -

 0.964 - - - - - 0.964 Mlig455_018407 {REF} {Length: 1746} {NoTransDecoderORF} {RNA1509_40699} {RNA1310_17673.2} {RNA815_24644.1}
10. MligTC455_34145 304 6.33 Mlig455_070588

Neo: -

Age: -

Region-enriched R4: 1.809/0.01469

 0.959 - - - - - 0.959 Mlig455_070588 {REF} {Length: 3450} {TRANSSPLICED} {RNA1509_40576} {RNA1310_8602} {RNA815_10261}
11. MligTC455_30497 700 14.57 Mlig455_030772

Neo: -

Age: -

Regeneration-upregulated BL: 1.590

Regeneration-enriched BL: 1.590

 MYO6 0.957 - - - - 0.957 - Mlig455_030772 {REF} {Length: 5570} {TRANSSPLICED} {Pfam: Myosin head (motor domain) [PF00063.23, score=774.8]; Myosin VI cargo binding domain [PF16521.7, score=129.9]; Myosin N-terminal SH3-like domain [PF02736.21, score=30.2]} {Human: ENSG00000196586, MYO6, myosin VI, [RH, Score=1394, Expect=0.0]} {Mouse: ENSMUSG00000033577, Myo6, myosin VI, [RH, Score=1384, Expect=0.0]} {Dmel: FBgn0011225, jar, jaguar, [RH, Score=1282, Expect=0.0]} {Celegans: WBGene00004969, spe-15, [RH, Score=1137, Expect=0.0]} {Smed: dd_Smed_v6_4503_0_1, dd_Smed_v6_4503_0_1, [RH, Score=1296, Expect=0.0]} {RNA1509_1417, RNA1509_15158} {RNA1310_883, RNA1509_1417, RNA1509_15158} {RNA1509_1417, RNA1509_15158, RNA815_546}
12. MligTC455_21911 1207 25.15 Mlig455_003039, Mlig455_003244, Mlig455_003332, Mlig455_006723

Neo: -

Age: -

 0.956 - - - - - 0.956

Mlig455_003039 {REF} {Length: 5928} {TRANSSPLICED} {RNA1509_2395} {RNA1310_756} {RNA815_226}

Mlig455_003244 {REF} {Length: 6672} {TRANSSPLICED} {RNA1509_16128, RNA1509_2395} {RNA1310_756, RNA1509_16128, RNA1509_2395} {RNA1509_16128, RNA1509_2395, RNA815_226}

Mlig455_003332 {REF} {Length: 6599} {TRANSSPLICED} {RNA1509_2395} {RNA1310_756} {RNA815_226}

Mlig455_006723 {REF} {Length: 463} {NoTransDecoderORF}
13. MligTC455_18472 662 13.79 Mlig455_065928

Neo: -

Age: -

 0.954 - - - - - 0.954 Mlig455_065928 {REF} {Length: 2444} {RNA1509_24487} {RNA1310_16089.1} {RNA815_13960}
14. MligTC455_18473 658 13.71 Mlig455_065950

Neo: -

Age: -

 0.952 - - - - - 0.952 Mlig455_065950 {REF} {Length: 1966} {TRANSSPLICED} {RNA1509_24487, RNA1509_46170} {RNA1310_16089.1, RNA1509_24487, RNA1509_46170} {RNA1509_24487, RNA1509_46170, RNA815_13960}
15. MligTC455_17816 811 16.89 Mlig455_062825

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.393/0.00001
Region-enriched R4: 1.223/0.00899

 0.95 - - - - - 0.950 Mlig455_062825 {REF} {Length: 551} {TRANSSPLICED} {Pfam: Mitochondrial ribosome protein 63 [PF14978.8, score=34.9]} {Smed: dd_Smed_v6_6347_0_1, dd_Smed_v6_6347_0_1, [RH, Score=79.7, Expect=2e-20]} {RNA1509_15240, RNA1509_16711, RNA1509_17890} {RNA1310_49004, RNA1509_15240, RNA1509_16711, RNA1509_17890} {RNA1509_15240, RNA1509_16711, RNA1509_17890, RNA815_33851}

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