Data search
Results for MligTC455_17816
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_17816 | 811 | 16.89 | Mlig455_062825 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.393/0.00001 |
Mlig455_062825 {REF} {Length: 551} {TRANSSPLICED} {Pfam: Mitochondrial ribosome protein 63 [PF14978.8, score=34.9]} {Smed: dd_Smed_v6_6347_0_1, dd_Smed_v6_6347_0_1, [RH, Score=79.7, Expect=2e-20]} {RNA1509_15240, RNA1509_16711, RNA1509_17890} {RNA1310_49004, RNA1509_15240, RNA1509_16711, RNA1509_17890} {RNA1509_15240, RNA1509_16711, RNA1509_17890, RNA815_33851} |
Cumulative graph for MligTC455_17816
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.994 | 4.421 | 0.34473 | 0.98843 | |
| RegionR2 | -0.334 | 4.421 | 0.43164 | 0.82202 | |
| RegionR3 | 0.413 | 4.421 | 0.19805 | 0.73727 | |
| RegionR4 | 1.223 | 4.421 | 0.00083 | 0.00899 | |
| RegionR5 | 1.393 | 4.421 | 0.00000 | 0.00001 | |
| RegionR6 | 0.454 | 4.421 | 0.17321 | 0.73132 | |
| RegionR7 | -0.419 | 4.421 | 0.36201 | 0.99764 | |
| RegionR8 | -1.737 | 4.421 | 0.00848 | 0.17125 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.573 | 4.421 | 0.69727 | 1.00000 | |
| RegenerationR2 | -0.247 | 4.421 | 0.47725 | 0.86181 | |
| RegenerationR3 | 0.025 | 4.421 | 0.94523 | 1.00000 | |
| RegenerationR4 | -0.161 | 4.421 | 0.64685 | 0.93161 | |
| RegenerationR5 | -0.205 | 4.421 | 0.49949 | 0.85814 | |
| RegenerationR6 | -0.106 | 4.421 | 0.77188 | 0.96320 | |
| RegenerationBL | 0.96 | 4.421 | 0.04501 | 0.24274 | |
| RegenerationTP | 0.835 | 4.421 | 0.13871 | 0.55644 |
Genes with expression patterns similar to MligTC455_17816
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_17816 | 811 | 16.89 | Mlig455_062825 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.393/0.00001 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_062825 {REF} {Length: 551} {TRANSSPLICED} {Pfam: Mitochondrial ribosome protein 63 [PF14978.8, score=34.9]} {Smed: dd_Smed_v6_6347_0_1, dd_Smed_v6_6347_0_1, [RH, Score=79.7, Expect=2e-20]} {RNA1509_15240, RNA1509_16711, RNA1509_17890} {RNA1310_49004, RNA1509_15240, RNA1509_16711, RNA1509_17890} {RNA1509_15240, RNA1509_16711, RNA1509_17890, RNA815_33851} | |
| 2. | MligTC455_41084 | 257 | 5.36 | Mlig455_006875 | Neo: - Age: - Region-enriched R5: 1.884/0.00028 |
SULT1B1 | 0.968 | - | - | - | - | 0.968 | - | Mlig455_006875 {REF} {Length: 1782} {Pfam: Sulfotransferase domain [PF00685.29, score=122.1]; Sulfotransferase family [PF13469.8, score=23.0]} {Human: ENSG00000173597, SULT1B1, sulfotransferase family 1B member 1, [Score=104, Expect=1e-25]; ENSG00000198075, SULT1C4, sulfotransferase family 1C member 4, [Score=103, Expect=7e-25]; ENSG00000138068, SULT6B1, sulfotransferase family 6B member 1, [Score=101, Expect=3e-24]; ENSG00000198203, SULT1C2, sulfotransferase family 1C member 2, [Score=99.8, Expect=1e-23]; ENSG00000197165, SULT1A2, sulfotransferase family 1A member 2, [Score=99.0, Expect=2e-23]} {Mouse: ENSMUSG00000029269, Sult1b1, sulfotransferase family 1B, member 1, [Score=107, Expect=1e-26]; ENSMUSG00000003271, Sult2b1, sulfotransferase family, cytosolic, 2B, member 1, [Score=103, Expect=9e-25]; ENSMUSG00000048473, Sult6b2, sulfotransferase family 6B, member 2, [Score=103, Expect=2e-25]; ENSMUSG00000038045, Sult6b1, sulfotransferase family, cytosolic, 6B, member 1, [Score=103, Expect=4e-25]} {Dmel: FBgn0033887, St4, Sulfotransferase 4, [Score=86.7, Expect=5e-19]} {Smed: dd_Smed_v6_7766_0_1, dd_Smed_v6_7766_0_1, [Score=73.9, Expect=6e-15]} {RNA1509_50923} {RNA1310_21135} {RNA815_12979} |
| 3. | MligTC455_43250 | 461 | 9.6 | Mlig455_016728 | Neo: - Age: Up-Down-Up |
MKLN1 | 0.967 | - | - | - | - | - | 0.967 | Mlig455_016728 {REF} {Length: 1808} {Human: ENSG00000128585, MKLN1, muskelin 1, [Score=92.4, Expect=3e-20]} {Mouse: ENSMUSG00000025609, Mkln1, muskelin 1, intracellular mediator containing kelch motifs, [RH, Score=92.8, Expect=2e-22]} {Dmel: FBgn0033757, muskelin, [Score=95.1, Expect=2e-21]} {RNA1509_13339} {RNA1310_3016.1} {RNA815_1486} |
| 4. | MligTC455_43251 | 460 | 9.59 | Mlig455_016660, Mlig455_016727 | Neo: - Age: - |
MKLN1 | 0.966 | - | - | - | - | - | 0.966 | Mlig455_016660 {REF} {Length: 3631} {TRANSSPLICED} {Pfam: Muskelin N-terminus [PF06588.13, score=195.6]; Galactose oxidase, central domain [PF13415.8, score=76.5]; Kelch motif [PF13964.8, score=40.9]; Kelch motif [PF01344.27, score=36.8]; Galactose oxidase, central domain [PF13418.8, score=34.8]; Kelch motif [PF13854.8, score=31.7]; Kelch motif [PF07646.17, score=27.0]} {Human: ENSG00000128585, MKLN1, muskelin 1, [RH, Score=586, Expect=0.0]} {Mouse: ENSMUSG00000025609, Mkln1, muskelin 1, intracellular mediator containing kelch motifs, [RH, Score=588, Expect=0.0]} {Dmel: FBgn0033757, muskelin, [RH, Score=489, Expect=4e-160]} {RNA1509_13339, RNA1509_15922} {RNA1310_3016.1, RNA1509_13339, RNA1509_15922} {RNA1509_13339, RNA1509_15922, RNA815_1486} Mlig455_016727 {REF} {Length: 279} {TRANSSPLICED} {Pfam: Muskelin N-terminus [PF06588.13, score=195.6]; Galactose oxidase, central domain [PF13415.8, score=76.5]; Kelch motif [PF13964.8, score=40.9]; Kelch motif [PF01344.27, score=36.8]; Galactose oxidase, central domain [PF13418.8, score=34.8]; Kelch motif [PF13854.8, score=31.7]; Kelch motif [PF07646.17, score=27.0]} {Human: ENSG00000128585, MKLN1, muskelin 1, [RH, Score=586, Expect=0.0]} {Mouse: ENSMUSG00000025609, Mkln1, muskelin 1, intracellular mediator containing kelch motifs, [RH, Score=588, Expect=0.0]} {Dmel: FBgn0033757, muskelin, [RH, Score=489, Expect=4e-160]} {RNA1509_15922} {RNA1310_20443} {RNA815_1486} |
| 5. | MligTC455_41434 | 736 | 15.32 | Mlig455_034800 | Neo: Irradiation Age: - |
0.964 | - | - | - | - | - | 0.964 | Mlig455_034800 {REF} {Length: 2333} {TRANSSPLICED} {RNA1509_11589, RNA1509_43191, RNA1509_54049} {RNA1310_26849.1, RNA1509_11589, RNA1509_43191, RNA1509_54049} {RNA1509_11589, RNA1509_43191, RNA1509_54049, RNA815_11952} | |
| 6. | MligTC455_29378 | 59 | 1.23 | Mlig455_043826 | Neo: - Age: Down-Down-Down |
0.96 | - | - | - | - | - | 0.960 | Mlig455_043826 {REF} {Length: 852} {RNA1509_21350} {RNA1310_16376} {RNA815_10254} | |
| 7. | MligTC455_41433 | 747 | 15.57 | Mlig455_034788 | Neo: - Age: logFC(26M/2M)=0.306 |
0.959 | - | - | - | - | - | 0.959 | Mlig455_034788 {REF} {Length: 2395} {TRANSSPLICED} {RNA1509_34318, RNA1509_43191, RNA1509_49378} {RNA1310_26849.1, RNA1509_34318, RNA1509_49378} {RNA1509_34318, RNA1509_49378, RNA815_11952} | |
| 8. | MligTC455_11085 | 273 | 5.68 | Mlig455_020464 | Neo: - Age: - |
SUPT3H | 0.958 | - | - | - | - | - | 0.958 | Mlig455_020464 {REF} {Length: 3547} {Pfam: Transcription initiation factor IID, 18kD subunit [PF02269.18, score=25.0]; NHR1 homology to TAF [PF07531.16, score=20.5]} {Human: ENSG00000196284, SUPT3H, SPT3 homolog, SAGA and STAGA complex component, [Score=55.5, Expect=2e-07]} {Mouse: ENSMUSG00000038954, Supt3, suppressor of Ty 3, [RH, Score=68.2, Expect=2e-11]} {RNA1509_32661} {RNA1310_23242.2} {RNA815_37972} |
| 9. | MligTC455_27659 | 84 | 1.74 | Mlig455_018407 | Neo: - Age: - |
0.957 | - | - | - | - | - | 0.957 | Mlig455_018407 {REF} {Length: 1746} {NoTransDecoderORF} {RNA1509_40699} {RNA1310_17673.2} {RNA815_24644.1} | |
| 10. | MligTC455_25964 | 197 | 4.09 | Mlig455_028174 | Neo: - Age: - |
SF3B1 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_028174 {REF} {Length: 3928} {Pfam: Splicing factor 3B subunit 1 [PF08920.12, score=132.4]; HEAT repeat [PF02985.24, score=43.5]; HEAT-like repeat [PF13513.8, score=38.9]; HEAT repeats [PF13646.8, score=32.4]} {Human: ENSG00000115524, SF3B1, splicing factor 3b subunit 1, [RH, Score=1743, Expect=0.0]} {Mouse: ENSMUSG00000025982, Sf3b1, splicing factor 3b, subunit 1, [RH, Score=1743, Expect=0.0]} {Dmel: FBgn0031266, Sf3b1, Splicing factor 3b subunit 1, [RH, Score=1741, Expect=0.0]} {Celegans: WBGene00011605, sftb-1, Splicing Factor ThreeB (3b) Subunit homolog, [RH, Score=1610, Expect=0.0]} {Smed: dd_Smed_v6_2797_0_1, dd_Smed_v6_2797_0_1, [RH, Score=1605, Expect=0.0]} {RNA1509_34519} {RNA1310_989.1} {RNA815_553} |
| 11. | MligTC455_31736 | 229 | 4.77 | Mlig455_005581 | Neo: - Age: - |
AC006059.2 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_005581 {REF} {Length: 3051} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4164) [PF13747.8, score=18.9]} {Human: ENSG00000280571, AC006059.2, novel transcript, [Score=165, Expect=1e-42]; ENSG00000244607, CCDC13, coiled-coil domain containing 13, [Score=164, Expect=2e-42]} {Mouse: ENSMUSG00000079235, Ccdc13, coiled-coil domain containing 13, [Score=142, Expect=3e-35]} {Smed: dd_Smed_v6_12055_0_1, dd_Smed_v6_12055_0_1, [Score=162, Expect=7e-43]} {RNA1509_34806} {RNA1310_11271} {RNA815_3539} |
Berezikov Lab - 2020-2021 © ERIBA