Data search


search
Exact
Search

Results for MligTC455_26007

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_26007 9 0.19 Mlig455_045232

Neo: -

Age: Down-Down-Up

Mlig455_045232 {REF} {Length: 1794} {RNA1509_3271} {RNA1310_35152.1} {RNA815_5895}

Cumulative graph for MligTC455_26007

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.62 0.689 0.99965 1.00000
RegionR2 -1.05 0.689 0.99994 1.00000
RegionR3 -0.501 0.689 0.99970 1.00000
RegionR4 1.104 0.689 1.00000 1.00000
RegionR5 -0.149 0.689 0.99981 1.00000
RegionR6 -0.472 0.689 0.99967 1.00000
RegionR7 -0.257 0.689 0.99990 1.00000
RegionR8 -0.296 0.689 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.603 0.689 0.99984 1.00000
RegenerationR2 0.179 0.689 0.99993 1.00000
RegenerationR3 2.252 0.689 0.91119 1.00000
RegenerationR4 1.872 0.689 0.96496 1.00000
RegenerationR5 3.22 0.689 0.76151 0.97597
RegenerationR6 3.09 0.689 0.57148 0.85247
RegenerationBL 0.201 0.689 0.99984 1.00000
RegenerationTP -0.227 0.689 0.99991 1.00000


Genes with expression patterns similar to MligTC455_26007

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_26007 9 0.19 Mlig455_045232

Neo: -

Age: Down-Down-Up

2 - - - 1.000 - 1.000 Mlig455_045232 {REF} {Length: 1794} {RNA1509_3271} {RNA1310_35152.1} {RNA815_5895}
2. MligTC455_38393 151 3.15 Mlig455_066602

Neo: -

Age: -

Region-enriched R6: 6.635/0.00000

ADAMTS8 0.98 - - - 0.980 - - Mlig455_066602 {REF} {Length: 1768} {Pfam: Reprolysin (M12B) family zinc metalloprotease [PF01421.21, score=42.1]; Metallo-peptidase family M12B Reprolysin-like [PF13582.8, score=27.8]; Metallo-peptidase family M12 [PF13688.8, score=26.5]; Metallo-peptidase family M12B Reprolysin-like [PF13574.8, score=21.4]} {Human: ENSG00000134917, ADAMTS8, ADAM metallopeptidase with thrombospondin type 1 motif 8, [Score=59.3, Expect=9e-09]} {Mouse: ENSMUSG00000031994, Adamts8, a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 8, [Score=59.7, Expect=4e-09]} {Celegans: WBGene00020567, T19D2.1, [Score=66.2, Expect=2e-11]} {RNA1509_41739} {RNA1310_5612} {RNA815_2636.1}
3. MligTC455_53645 230 4.79 Mlig455_056853

Neo: Irradiation

Age: Up-Down-Up

Region-enriched R5: 2.305/0.00036

Regeneration-upregulated R4: 3.325

Regeneration-enriched R4: 3.325

MYO9A 0.977 - - - 0.977 - - Mlig455_056853 {REF} {Length: 3207} {Pfam: RhoGAP domain [PF00620.29, score=92.6]} {Human: ENSG00000066933, MYO9A, myosin IXA, [Score=73.9, Expect=8e-13]} {Mouse: ENSMUSG00000039585, Myo9a, myosin IXa, [Score=72.8, Expect=2e-12]} {Dmel: FBgn0036257, RhoGAP68F, Rho GTPase activating protein at 68F, [Score=67.8, Expect=2e-11]} {Celegans: WBGene00001559, gei-1, GEX Interacting protein, [Score=73.2, Expect=6e-13]} {Smed: dd_Smed_v6_6129_0_1, dd_Smed_v6_6129_0_1, [Score=62.8, Expect=6e-10]} {RNA1310_25774} {RNA815_32981}
4. MligTC455_14919 1670 34.79 Mlig455_070591

Neo: -

Age: -

Region-specific R6: 7.887

Region-enriched R6: 7.678/0.00000

0.973 - - - 0.973 - - Mlig455_070591 {REF} {Length: 1566} {RNA1509_3251} {RNA1310_22757.1} {RNA815_9811}
5. MligTC455_09529 14 0.29 Mlig455_021548

Neo: -

Age: -

0.972 - - - 0.972 - - Mlig455_021548 {REF} {Length: 184} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_66700}
6. MligTC455_10969 5 0.1 Mlig455_014642

Neo: -

Age: -

0.971 - - - 0.971 - - Mlig455_014642 {REF} {Length: 2251} {RNA1310_62084} {RNA815_38455}
7. MligTC455_07054 18 0.38 Mlig455_004876

Neo: -

Age: -

0.968 - - - 0.968 - - Mlig455_004876 {REF} {Length: 1186} {RNA1310_41561} {RNA815_58088}
8. MligTC455_09184 172 3.59 Mlig455_049490

Neo: -

Age: Up-Down-Up

Region-enriched R6: 2.250/0.01050
Region-enriched R5: 2.216/0.00016

FZD10 0.968 - - - 0.968 - - Mlig455_049490 {REF} {Length: 3141} {Pfam: Frizzled/Smoothened family membrane region [PF01534.19, score=284.4]; Fz domain [PF01392.24, score=71.1]} {Human: ENSG00000111432, FZD10, frizzled class receptor 10, [Score=304, Expect=2e-94]; ENSG00000163251, FZD5, frizzled class receptor 5, [Score=294, Expect=1e-90]; ENSG00000188763, FZD9, frizzled class receptor 9, [Score=290, Expect=3e-89]} {Mouse: ENSMUSG00000049551, Fzd9, frizzled class receptor 9, [Score=308, Expect=3e-96]; ENSMUSG00000081683, Fzd10, frizzled class receptor 10, [Score=301, Expect=2e-93]; ENSMUSG00000045005, Fzd5, frizzled class receptor 5, [Score=295, Expect=3e-91]} {Dmel: FBgn0001085, fz, frizzled, [Score=231, Expect=1e-67]} {Celegans: WBGene00000478, cfz-2, Frizzled-2, [Score=238, Expect=5e-70]} {Smed: dd_Smed_v6_11650_0_1, dd_Smed_v6_11650_0_1, [Score=294, Expect=2e-90]} {RNA1509_26552} {RNA1310_10390, RNA1509_26552} {RNA1509_26552, RNA815_21631}
9. MligTC455_22940 125 2.6 Mlig455_008414

Neo: -

Age: -

ERCC5 0.965 - - - 0.965 - - Mlig455_008414 {REF} {Length: 2753} {TRANSSPLICED} {Pfam: XPG I-region [PF00867.20, score=78.0]; 5'-3' exonuclease, C-terminal SAM fold [PF01367.22, score=24.2]} {Human: ENSG00000134899, ERCC5, ERCC excision repair 5, endonuclease, [RH, Score=192, Expect=1e-49]; ENSG00000270181, BIVM-ERCC5, BIVM-ERCC5 readthrough, [RH, Score=192, Expect=1e-49]} {Mouse: ENSMUSG00000026048, Ercc5, excision repair cross-complementing rodent repair deficiency, complementation group 5, [RH, Score=189, Expect=6e-49]} {Dmel: FBgn0002887, mus201, mutagen-sensitive 201, [RH, Score=179, Expect=5e-46]} {Celegans: WBGene00019004, xpg-1, XPG (Xeroderma Pigmentosum group G) DNA repair gene homolog, [RH, Score=105, Expect=6e-23]} {Smed: dd_Smed_v6_10808_0_1, dd_Smed_v6_10808_0_1, [RH, Score=189, Expect=7e-50]} {RNA1509_14172} {RNA1310_4988} {RNA815_6998}
10. MligTC455_25460 203 4.23 Mlig455_017949

Neo: Irradiation

Age: -

UTP25 0.964 - - - 0.964 - - Mlig455_017949 {REF} {Length: 2589} {TRANSSPLICED} {Pfam: Utp25, U3 small nucleolar RNA-associated SSU processome protein 25 [PF06862.14, score=383.4]; DEAD/DEAH box helicase [PF00270.31, score=19.0]} {Human: ENSG00000117597, UTP25, UTP25, small subunit processor component, [RH, Score=293, Expect=4e-89]} {Mouse: ENSMUSG00000016181, Diexf, digestive organ expansion factor homolog (zebrafish), [RH, Score=286, Expect=2e-86]} {Dmel: FBgn0034933, CG3735, [RH, Score=253, Expect=1e-74]} {Celegans: WBGene00012756, Y41C4A.9, [RH, Score=191, Expect=4e-53]} {Smed: dd_Smed_v6_9470_0_1, dd_Smed_v6_9470_0_1, [RH, Score=153, Expect=1e-39]} {RNA1509_25312} {RNA1310_17305.1, RNA1509_25312} {RNA1509_25312, RNA815_9754}
11. MligTC455_18044 52 1.08 Mlig455_013016

Neo: -

Age: -

0.963 - - - 0.963 - - Mlig455_013016 {REF} {Length: 4325} {Pfam: THAP domain [PF05485.14, score=62.3]; Transposase protein [PF12017.10, score=38.2]} {RNA1509_43421} {RNA1310_39702, RNA1509_43421} {RNA1509_43421, RNA815_5910}
12. MligTC455_38392 361 7.52 Mlig455_005992

Neo: -

Age: -

Region-enriched R6: 6.270/0.00000

ADAMTS19 0.961 - - - 0.961 - - Mlig455_005992 {REF} {Length: 1792} {Pfam: Reprolysin (M12B) family zinc metalloprotease [PF01421.21, score=34.5]; ADAM cysteine-rich domain [PF17771.3, score=28.4]; Metallo-peptidase family M12B Reprolysin-like [PF13574.8, score=23.5]; Metallo-peptidase family M12 [PF13688.8, score=21.0]} {Human: ENSG00000145808, ADAMTS19, ADAM metallopeptidase with thrombospondin type 1 motif 19, [Score=62.4, Expect=1e-09]} {Mouse: ENSMUSG00000053441, Adamts19, a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 19, [Score=61.2, Expect=2e-09]} {Dmel: FBgn0034903, sona, sol narae, [Score=53.1, Expect=4e-07]} {RNA1509_31560, RNA1509_55852} {RNA1310_5612, RNA1509_31560} {RNA1509_31560, RNA815_2636.1}
13. MligTC455_18973 78 1.63 Mlig455_019347

Neo: -

Age: Up-Down-Down

Region-enriched R4: 3.600/0.01920

0.96 - - - 0.960 - - Mlig455_019347 {REF} {Length: 1563} {RNA1509_35598, RNA1509_58186} {RNA1310_23207.2, RNA1509_58186} {RNA1509_58186, RNA815_10106}
14. MligTC455_07821 263 5.47 Mlig455_009887

Neo: -

Age: logFC(26M/2M)=-0.645

Region-enriched R6: 6.848/0.00000

0.959 - - - 0.959 - - Mlig455_009887 {REF} {Length: 1607} {RNA1310_20970} {RNA815_31710}
15. MligTC455_07943 18 0.37 Mlig455_064043

Neo: -

Age: -

0.959 - - - 0.959 - - Mlig455_064043 {REF} {Length: 381} {NoTransDecoderORF}
16. MligTC455_34400 19 0.4 Mlig455_015681

Neo: Irradiation

Age: -

0.959 - - - 0.959 - - Mlig455_015681 {REF} {Length: 2461} {RNA1509_42201} {RNA1310_12457} {RNA815_4461}
17. MligTC455_37768 21 0.43 Mlig455_040181

Neo: -

Age: -

GIMAP4 0.957 - - - 0.957 - - Mlig455_040181 {REF} {Length: 1622} {Pfam: AIG1 family [PF04548.18, score=121.3]; 50S ribosome-binding GTPase [PF01926.25, score=40.0]; Dynamin family [PF00350.25, score=29.1]; RsgA GTPase [PF03193.18, score=20.8]; AAA ATPase domain [PF13191.8, score=20.8]; ABC transporter [PF00005.29, score=20.7]; AAA domain [PF13476.8, score=19.8]; Ferrous iron transport protein B [PF02421.20, score=19.4]} {Human: ENSG00000133574, GIMAP4, GTPase, IMAP family member 4, [Score=92.8, Expect=1e-20]; ENSG00000179144, GIMAP7, GTPase, IMAP family member 7, [Score=89.4, Expect=1e-19]} {Mouse: ENSMUSG00000051124, Gimap9, GTPase, IMAP family member 9, [Score=92.4, Expect=6e-21]} {Smed: dd_Smed_v6_13631_0_6, dd_Smed_v6_13631_0_6, [RH, Score=51.6, Expect=2e-08]} {RNA1509_8439} {RNA1310_70178} {RNA815_62940}
18. MligTC455_10522 86 1.8 Mlig455_047713

Neo: -

Age: -

0.955 - - - 0.955 - - Mlig455_047713 {REF} {Length: 2067} {RNA1509_36146} {RNA1310_33642} {RNA815_14202}
19. MligTC455_40137 98 2.05 Mlig455_060068

Neo: -

Age: -

Region-enriched R2: 4.909/0.02205
Region-enriched R3: 3.123/0.04741

IDNK 0.955 - - - 0.955 - - Mlig455_060068 {REF} {Length: 2173} {TRANSSPLICED} {Pfam: Shikimate kinase [PF01202.24, score=36.3]; AAA domain [PF13671.8, score=30.7]; AAA domain [PF13238.8, score=26.4]; AAA domain [PF13521.8, score=24.3]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=21.5]; AAA domain [PF13207.8, score=20.8]} {Human: ENSG00000148057, IDNK, IDNK, gluconokinase, [RH, Score=126, Expect=2e-36]} {Mouse: ENSMUSG00000050002, Idnk, idnK gluconokinase homolog (E. coli), [RH, Score=132, Expect=3e-39]} {Celegans: WBGene00017818, F26D11.1, Gluconokinase, [RH, Score=127, Expect=2e-37]} {Smed: dd_Smed_v6_14936_0_1, dd_Smed_v6_14936_0_1, [RH, Score=108, Expect=2e-30]} {RNA1509_45489, RNA1509_48460} {RNA1310_24189, RNA1509_45489} {RNA1509_45489, RNA815_32058}
20. MligTC455_46531 523 10.89 Mlig455_004827, Mlig455_004893, Mlig455_004906

Neo: Irradiation

Age: -

Region-enriched R5: 1.899/0.03183

0.955 - - - 0.955 - -

Mlig455_004827 {REF} {Length: 3718} {Pfam: Homeodomain [PF00046.31, score=46.2]; Ubiquitin-like oligomerisation domain of SATB [PF16534.7, score=30.3]} {Dmel: FBgn0020307, dve, defective proventriculus, [Score=97.1, Expect=2e-20]} {Celegans: WBGene00022861, dve-1, [Score=97.4, Expect=4e-21]} {Smed: dd_Smed_v6_10184_0_1, dd_Smed_v6_10184_0_1, [RH, Score=118, Expect=2e-27]} {RNA1509_42877} {RNA1310_7165.1, RNA1509_42877} {RNA1509_42877, RNA815_36576}

Mlig455_004893 {REF} {Length: 3624} {Pfam: Homeodomain [PF00046.31, score=48.6]; Ubiquitin-like oligomerisation domain of SATB [PF16534.7, score=34.1]} {Dmel: FBgn0020307, dve, defective proventriculus, [Score=98.2, Expect=8e-21]} {Celegans: WBGene00022861, dve-1, [Score=97.1, Expect=6e-21]} {Smed: dd_Smed_v6_10184_0_1, dd_Smed_v6_10184_0_1, [RH, Score=116, Expect=6e-27]} {RNA1509_42877} {RNA1310_7165.1} {RNA815_36576}

Mlig455_004906 {REF} {Length: 3136} {Pfam: Homeodomain [PF00046.31, score=48.5]; Ubiquitin-like oligomerisation domain of SATB [PF16534.7, score=34.0]} {Dmel: FBgn0020307, dve, defective proventriculus, [Score=98.2, Expect=9e-21]} {Celegans: WBGene00022861, dve-1, [Score=98.6, Expect=2e-21]} {Smed: dd_Smed_v6_10184_0_1, dd_Smed_v6_10184_0_1, [RH, Score=118, Expect=2e-27]} {RNA1509_42877} {RNA1310_7165.1} {RNA815_36576}
21. MligTC455_04083 51 1.05 Mlig455_038343, Mlig455_038369, Mlig455_068288

Neo: -

Age: -

0.953 - - - 0.953 - -

Mlig455_038343 {REF} {Length: 680} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=35.3]} {RNA1310_74189} {RNA815_45309}

Mlig455_038369 {REF} {Length: 2060} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=42.5]} {RNA1310_80577} {RNA815_45309}

Mlig455_068288 {REF} {Length: 2096} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=39.5]} {RNA1310_80577} {RNA815_45309}
22. MligTC455_19970 173 3.59 Mlig455_034815

Neo: -

Age: -

Region-enriched R6: 4.214/0.00162

NR1I2 0.953 - - - 0.953 - - Mlig455_034815 {REF} {Length: 2960} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=75.1]} {Human: ENSG00000144852, NR1I2, nuclear receptor subfamily 1 group I member 2, [Score=136, Expect=2e-34]} {Mouse: ENSMUSG00000058756, Thra, thyroid hormone receptor alpha, [Score=129, Expect=9e-33]; ENSMUSG00000022809, Nr1i2, nuclear receptor subfamily 1, group I, member 2, [Score=123, Expect=2e-30]} {Dmel: FBgn0000546, EcR, Ecdysone receptor, [Score=134, Expect=3e-33]} {Celegans: WBGene00000908, daf-12, Nuclear hormone receptor family member daf-12, [RH, Score=132, Expect=1e-32]} {Smed: dd_Smed_v6_11714_0_1, dd_Smed_v6_11714_0_1, [Score=144, Expect=1e-37]} {RNA1509_24283} {RNA1310_5453} {RNA815_10529.1}
23. MligTC455_21584 67 1.4 Mlig455_003528, Mlig455_015537

Neo: -

Age: Down-Up-Up

0.953 - - - - - 0.953

Mlig455_003528 {REF} {Length: 1918} {RNA1509_49780} {RNA1310_119490} {RNA815_59473}

Mlig455_015537 {REF} {Length: 2027} {RNA1509_49780} {RNA1310_61012} {RNA815_59473}
24. MligTC455_24897 1565 32.6 Mlig455_048310, Mlig455_048334, Mlig455_048354

Neo: -

Age: logFC(26M/2M)=-0.953

Region-enriched R6: 7.021/0.00000

SLC6A5 0.953 - - - 0.953 - -

Mlig455_048310 {REF} {Length: 2569} {TRANSSPLICED} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=599.3]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=531, Expect=3e-179]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=529, Expect=1e-178]} {Dmel: FBgn0034911, CG5549, [RH, Score=523, Expect=5e-172]} {Celegans: WBGene00004910, snf-11, Transporter, [Score=408, Expect=4e-134]} {Smed: dd_Smed_v6_10458_0_1, dd_Smed_v6_10458_0_1, [Score=556, Expect=0.0]} {RNA1509_14130} {RNA1310_6202.1, RNA1509_14130} {RNA1509_14130, RNA815_3548}

Mlig455_048334 {REF} {Length: 2413} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=594.3]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=528, Expect=4e-178]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=527, Expect=9e-178]} {Dmel: FBgn0034911, CG5549, [RH, Score=518, Expect=9e-170]} {Celegans: WBGene00004910, snf-11, Transporter, [Score=407, Expect=8e-134]} {Smed: dd_Smed_v6_10458_0_1, dd_Smed_v6_10458_0_1, [Score=550, Expect=0.0]} {RNA1509_14130} {RNA1310_6202.1} {RNA815_3548}

Mlig455_048354 {REF} {Length: 2413} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=598.4]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=530, Expect=7e-179]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=528, Expect=2e-178]} {Dmel: FBgn0034911, CG5549, [RH, Score=522, Expect=2e-171]} {Celegans: WBGene00004910, snf-11, Transporter, [Score=409, Expect=8e-135]} {Smed: dd_Smed_v6_10458_0_1, dd_Smed_v6_10458_0_1, [Score=556, Expect=0.0]} {RNA1509_14130, RNA1509_31856} {RNA1310_6202.1, RNA1509_31856} {RNA1509_31856, RNA815_3548}
25. MligTC455_29004 1944 40.5 Mlig455_004701

Neo: -

Age: -

Region-specific R6: 7.648

Region-enriched R6: 8.174/0.00000

ANK1 0.953 - - - 0.953 - - Mlig455_004701 {REF} {Length: 6457} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=167.9]; Ankyrin repeats (many copies) [PF13637.8, score=154.0]; Ankyrin repeat [PF00023.32, score=138.0]; Ankyrin repeats (many copies) [PF13857.8, score=123.4]; Ankyrin repeat [PF13606.8, score=113.7]; Mab-21 protein [PF03281.16, score=30.8]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=170, Expect=3e-43]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=167, Expect=1e-42]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=159, Expect=8e-40]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=160, Expect=2e-40]} {Smed: dd_Smed_v6_2072_0_5, dd_Smed_v6_2072_0_5, [Score=142, Expect=9e-35]} {RNA1509_1418, RNA1509_52877} {RNA1310_194.1, RNA1509_1418} {RNA1509_1418, RNA815_25433}
26. MligTC455_14954 32 0.66 Mlig455_051468, Mlig455_066698

Neo: -

Age: -

0.952 - - - 0.952 - -

Mlig455_051468 {REF} {Length: 741} {NoTransDecoderORF}

Mlig455_066698 {REF} {Length: 2055} {Smed: dd_Smed_v6_5882_0_1, dd_Smed_v6_5882_0_1, [Score=41.2, Expect=1e-05]} {RNA1509_10844} {RNA1310_32662} {RNA815_30370}
27. MligTC455_01886 11 0.22 Mlig455_022823, Mlig455_022932

Neo: -

Age: Down-Up-Down

0.951 - - - 0.951 - -

Mlig455_022823 {REF} {Length: 93} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_40444} {RNA1310_2430.3} {RNA815_11228.1}

Mlig455_022932 {REF} {Length: 93} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_40444} {RNA1310_2430.3} {RNA815_11228.1}
28. MligTC455_02903 85 1.78 Mlig455_034050

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.689

Region-enriched R6: 6.316/0.00001

0.951 - - - 0.951 - - Mlig455_034050 {REF} {Length: 403} {Smed: dd_Smed_v6_1636_0_1, dd_Smed_v6_1636_0_1, [Score=62.4, Expect=3e-11]} {RNA1509_301} {RNA1310_15} {RNA815_90}
29. MligTC455_13353 884 18.42 Mlig455_004387, Mlig455_037201

Neo: Int S/G2/M

Age: -

SMC2 0.951 - - - 0.951 - -

Mlig455_004387 {REF} {Length: 5448} {Pfam: RecF/RecN/SMC N terminal domain [PF02463.21, score=237.8]; SMC proteins Flexible Hinge Domain [PF06470.15, score=64.9]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=47.2]; AAA ATPase domain [PF13175.8, score=32.8]; P-loop containing region of AAA domain [PF13555.8, score=19.9]; Intra-flagellar transport protein 57 [PF10498.11, score=17.6]} {Human: ENSG00000136824, SMC2, structural maintenance of chromosomes 2, [RH, Score=1051, Expect=0.0]} {Mouse: ENSMUSG00000028312, Smc2, structural maintenance of chromosomes 2, [RH, Score=1050, Expect=0.0]} {Dmel: FBgn0027783, SMC2, Structural maintenance of chromosomes 2, [RH, Score=811, Expect=0.0]} {Celegans: WBGene00003367, mix-1, Mitotic chromosome and X-chromosome-associated protein mix-1, [RH, Score=577, Expect=0.0]} {Smed: dd_Smed_v6_7123_0_1, dd_Smed_v6_7123_0_1, [RH, Score=883, Expect=0.0]} {RNA1509_3725} {RNA1310_2008, RNA1509_3725} {RNA1509_3725, RNA815_5773}

Mlig455_037201 {REF} {Length: 4655} {Pfam: RecF/RecN/SMC N terminal domain [PF02463.21, score=237.8]; SMC proteins Flexible Hinge Domain [PF06470.15, score=64.9]; AAA domain [PF13476.8, score=56.9]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=47.2]; AAA ATPase domain [PF13175.8, score=33.3]; P-loop containing region of AAA domain [PF13555.8, score=19.9]; ABC transporter [PF00005.29, score=19.3]} {Human: ENSG00000136824, SMC2, structural maintenance of chromosomes 2, [RH, Score=1047, Expect=0.0]} {Mouse: ENSMUSG00000028312, Smc2, structural maintenance of chromosomes 2, [RH, Score=1045, Expect=0.0]} {Dmel: FBgn0027783, SMC2, Structural maintenance of chromosomes 2, [RH, Score=813, Expect=0.0]} {Celegans: WBGene00003367, mix-1, Mitotic chromosome and X-chromosome-associated protein mix-1, [RH, Score=575, Expect=0.0]} {Smed: dd_Smed_v6_7123_0_1, dd_Smed_v6_7123_0_1, [RH, Score=884, Expect=0.0]} {RNA1509_3725} {RNA1310_2008} {RNA815_5773}
30. MligTC455_36091 299 6.23 Mlig455_039231, Mlig455_039250, Mlig455_055359, Mlig455_055417

Neo: -

Age: -

0.951 - - - 0.951 - -

Mlig455_039231 {REF} {Length: 1096} {NoTransDecoderORF} {RNA1509_30307} {RNA1310_674} {RNA815_24710}

Mlig455_039250 {REF} {Length: 1243} {NoTransDecoderORF} {RNA1509_30307} {RNA1310_674} {RNA815_24710}

Mlig455_055359 {REF} {Length: 1543} {TRANSSPLICED} {RNA1509_30307} {RNA1310_674} {RNA815_24710}

Mlig455_055417 {REF} {Length: 2760} {RNA1509_30307} {RNA1310_674} {RNA815_24710}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA