Data search
Results for MligTC455_10522
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_10522 | 86 | 1.80 | Mlig455_047713 | Neo: - Age: - |
Mlig455_047713 {REF} {Length: 2067} {RNA1509_36146} {RNA1310_33642} {RNA815_14202} |
Cumulative graph for MligTC455_10522
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -4.468 | 1.679 | 0.42001 | 1.00000 | |
| RegionR2 | 0.091 | 1.679 | 0.86820 | 1.00000 | |
| RegionR3 | 0.304 | 1.679 | 0.74934 | 1.00000 | |
| RegionR4 | -0.488 | 1.679 | 0.96383 | 1.00000 | |
| RegionR5 | 1.395 | 1.679 | 0.20674 | 0.50071 | |
| RegionR6 | 1.419 | 1.679 | 0.25595 | 0.84106 | |
| RegionR7 | 0.457 | 1.679 | 0.73484 | 1.00000 | |
| RegionR8 | 1.291 | 1.679 | 0.47850 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 2.592 | 1.679 | 0.99974 | 1.00000 | |
| RegenerationR2 | 2.263 | 1.679 | 0.07933 | 0.45447 | |
| RegenerationR3 | 1.35 | 1.679 | 0.31284 | 0.74313 | |
| RegenerationR4 | 2.374 | 1.679 | 0.08683 | 0.46351 | |
| RegenerationR5 | 1.014 | 1.679 | 0.31464 | 0.73927 | |
| RegenerationR6 | 1.982 | 1.679 | 0.08440 | 0.36345 | |
| RegenerationBL | 0.962 | 1.679 | 0.57167 | 0.92495 | |
| RegenerationTP | 0.386 | 1.679 | 0.82268 | 1.00000 |
Genes with expression patterns similar to MligTC455_10522
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_10522 | 86 | 1.8 | Mlig455_047713 | Neo: - Age: - |
5 | 1.000 | 1.000 | - | 1.000 | 1.000 | 1.000 | Mlig455_047713 {REF} {Length: 2067} {RNA1509_36146} {RNA1310_33642} {RNA815_14202} | |
| 2. | MligTC455_53645 | 230 | 4.79 | Mlig455_056853 | Neo: Irradiation Age: Up-Down-Up Region-enriched R5: 2.305/0.00036 Regeneration-upregulated R4: 3.325 Regeneration-enriched R4: 3.325 |
MYO9A | 1.842 | - | - | - | 0.966 | - | 0.876 | Mlig455_056853 {REF} {Length: 3207} {Pfam: RhoGAP domain [PF00620.29, score=92.6]} {Human: ENSG00000066933, MYO9A, myosin IXA, [Score=73.9, Expect=8e-13]} {Mouse: ENSMUSG00000039585, Myo9a, myosin IXa, [Score=72.8, Expect=2e-12]} {Dmel: FBgn0036257, RhoGAP68F, Rho GTPase activating protein at 68F, [Score=67.8, Expect=2e-11]} {Celegans: WBGene00001559, gei-1, GEX Interacting protein, [Score=73.2, Expect=6e-13]} {Smed: dd_Smed_v6_6129_0_1, dd_Smed_v6_6129_0_1, [Score=62.8, Expect=6e-10]} {RNA1310_25774} {RNA815_32981} |
| 3. | MligTC455_12872 | 149 | 3.1 | Mlig455_057561 | Neo: Irradiation Age: Down-Up-Down Region-enriched R5: 1.624/0.04283 |
1.721 | - | - | - | - | 0.751 | 0.970 | Mlig455_057561 {REF} {Length: 1130} {RNA1509_29400} {RNA1310_15529} {RNA815_14251} | |
| 4. | MligTC455_47270 | 139 | 2.9 | Mlig455_057576 | Neo: Irradiation Age: Down-Up-Up |
0.977 | - | - | - | - | - | 0.977 | Mlig455_057576 {REF} {Length: 2184} {RNA1310_33879} {RNA815_33583} | |
| 5. | MligTC455_07943 | 18 | 0.37 | Mlig455_064043 | Neo: - Age: - |
0.974 | - | - | - | 0.974 | - | - | Mlig455_064043 {REF} {Length: 381} {NoTransDecoderORF} | |
| 6. | MligTC455_18973 | 78 | 1.63 | Mlig455_019347 | Neo: - Age: Up-Down-Down Region-enriched R4: 3.600/0.01920 |
0.969 | - | - | - | 0.969 | - | - | Mlig455_019347 {REF} {Length: 1563} {RNA1509_35598, RNA1509_58186} {RNA1310_23207.2, RNA1509_58186} {RNA1509_58186, RNA815_10106} | |
| 7. | MligTC455_15471 | 310 | 6.45 | Mlig455_022527 | Neo: Irradiation Age: logFC(26M/2M)=0.502 Region-enriched R5: 3.024/0.00001 |
CHEK1 | 0.968 | - | - | - | - | - | 0.968 | Mlig455_022527 {REF} {Length: 2924} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=161.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=72.6]; Kinase-like [PF14531.8, score=18.3]} {Human: ENSG00000149554, CHEK1, checkpoint kinase 1, [RH, Score=219, Expect=3e-64]} {Mouse: ENSMUSG00000032113, Chek1, checkpoint kinase 1, [RH, Score=207, Expect=4e-60]} {Dmel: FBgn0261278, grp, grapes, [RH, Score=213, Expect=7e-62]} {Celegans: WBGene00000498, chk-1, Serine/threonine-protein kinase chk-1, [RH, Score=208, Expect=3e-60]} {Smed: dd_Smed_v6_12789_0_1, dd_Smed_v6_12789_0_1, [Score=124, Expect=3e-30]} {RNA1509_12170, RNA1509_35656, RNA1509_43198} {RNA1310_7988, RNA1509_12170, RNA1509_35656, RNA1509_43198} {RNA1509_12170, RNA1509_35656, RNA1509_43198, RNA815_13053} |
| 8. | MligTC455_53859 | 28 | 0.59 | Mlig455_056956 | Neo: - Age: - |
0.968 | - | - | - | 0.968 | - | - | Mlig455_056956 {REF} {Length: 1452} {RNA1310_30892} {RNA815_30662} | |
| 9. | MligTC455_23697 | 201 | 4.2 | Mlig455_010016 | Neo: - Age: Down-Down-Down |
0.967 | - | - | - | 0.967 | - | - | Mlig455_010016 {REF} {Length: 3299} {RNA1509_5326} {RNA1310_3123} {RNA815_678} | |
| 10. | MligTC455_14954 | 32 | 0.66 | Mlig455_051468, Mlig455_066698 | Neo: - Age: - |
0.966 | - | - | - | 0.966 | - | - | Mlig455_051468 {REF} {Length: 741} {NoTransDecoderORF} Mlig455_066698 {REF} {Length: 2055} {Smed: dd_Smed_v6_5882_0_1, dd_Smed_v6_5882_0_1, [Score=41.2, Expect=1e-05]} {RNA1509_10844} {RNA1310_32662} {RNA815_30370} |
|
| 11. | MligTC455_23994 | 93 | 1.95 | Mlig455_048700 | Neo: - Age: - |
KDM6A | 0.958 | - | - | - | - | - | 0.958 | Mlig455_048700 {REF} {Length: 4708} {Pfam: JmjC domain, hydroxylase [PF02373.24, score=104.2]; WD domain, G-beta repeat [PF00400.34, score=45.8]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=19.3]} {Human: ENSG00000147050, KDM6A, lysine demethylase 6A, [RH, Score=586, Expect=0.0]; ENSG00000183878, UTY, ubiquitously transcribed tetratricopeptide repeat containing, Y-linked, [RH, Score=577, Expect=0.0]; ENSG00000132510, KDM6B, lysine demethylase 6B, [RH, Score=560, Expect=4e-175]} {Mouse: ENSMUSG00000037369, Kdm6a, lysine (K)-specific demethylase 6A, [RH, Score=589, Expect=0.0]; ENSMUSG00000018476, Kdm6b, KDM1 lysine (K)-specific demethylase 6B, [RH, Score=560, Expect=9e-176]} {Dmel: FBgn0260749, Utx, Utx histone demethylase, [Score=590, Expect=0.0]} {Celegans: WBGene00017046, utx-1, UTX (Ubiquitously transcribed TPR on X) homolog, [RH, Score=422, Expect=9e-129]} {Smed: dd_Smed_v6_5837_0_1, dd_Smed_v6_5837_0_1, [RH, Score=565, Expect=0.0]} {RNA1509_48790} {RNA1310_10269.1} {RNA815_1846} |
| 12. | MligTC455_26007 | 9 | 0.19 | Mlig455_045232 | Neo: - Age: Down-Down-Up |
0.955 | - | - | - | 0.955 | - | - | Mlig455_045232 {REF} {Length: 1794} {RNA1509_3271} {RNA1310_35152.1} {RNA815_5895} | |
| 13. | MligTC455_53858 | 23 | 0.48 | Mlig455_053248 | Neo: - Age: Down-Up-Up |
0.953 | - | - | - | 0.953 | - | - | Mlig455_053248 {REF} {Length: 1450} {RNA1310_30892} {RNA815_30662} | |
| 14. | MligTC455_09529 | 14 | 0.29 | Mlig455_021548 | Neo: - Age: - |
0.951 | - | - | - | 0.951 | - | - | Mlig455_021548 {REF} {Length: 184} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_66700} | |
| 15. | MligTC455_18174 | 383 | 7.98 | Mlig455_064745 | Neo: - Age: Up-Down-Down Region-enriched R5: 1.035/0.02461 |
LMO7 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_064745 {REF} {Length: 5455} {TRANSSPLICED} {Pfam: Calponin homology (CH) domain [PF00307.33, score=47.7]; LIM domain [PF00412.24, score=27.8]; CAMSAP CH domain [PF11971.10, score=20.1]} {Human: ENSG00000136153, LMO7, LIM domain 7, [RH, Score=94.7, Expect=4e-19]} {Mouse: ENSMUSG00000033060, Lmo7, LIM domain only 7, [RH, Score=93.2, Expect=8e-19]} {Dmel: FBgn0263346, CG43427, [RH, Score=130, Expect=2e-30]} {Celegans: WBGene00017904, lim-8, LIM domain family, [RH, Score=116, Expect=4e-26]} {Smed: dd_Smed_v6_10011_0_2, dd_Smed_v6_10011_0_2, [Score=80.5, Expect=3e-15]} {RNA1509_28988, RNA1509_58786} {RNA1310_10382, RNA1509_28988, RNA1509_58786} {RNA1509_28988, RNA1509_58786, RNA815_2775.1} |
| 16. | MligTC455_24969 | 168 | 3.5 | Mlig455_001371, Mlig455_001390 | Neo: - |
0.95 | - | - | - | 0.950 | - | - | Mlig455_001371 {REF} {Length: 2286} {RNA1509_19455} {RNA1310_20818} {RNA815_23612} Mlig455_001390 {REF} {Length: 3512} {Pfam: C2H2-type zinc finger [PF13894.8, score=25.4]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=23.3]; Zinc finger, C2H2 type [PF00096.28, score=21.2]; Cysteine rich domain with multizinc binding regions [PF17979.3, score=19.6]} {Dmel: FBgn0036725, CG18265, [RH, Score=62.8, Expect=8e-10]} {Celegans: WBGene00000995, die-1, Dorsal Intercalation and Elongation defect, [Score=55.5, Expect=1e-07]} {Smed: dd_Smed_v6_34785_0_1, dd_Smed_v6_34785_0_1, [Score=106, Expect=3e-24]} {RNA1509_19455} {RNA1310_20818} {RNA815_23612} |
Berezikov Lab - 2020-2021 © ERIBA