Data search
Results for MligTC455_26300
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_26300 | 687 | 14.31 | Mlig455_042036 | Neo: - |
Mlig455_042036 {REF} {Length: 2763} {TRANSSPLICED} {Pfam: Soluble NSF attachment protein, SNAP [PF14938.8, score=311.5]; Tetratricopeptide repeat [PF13424.8, score=33.3]; Tetratricopeptide repeat [PF13371.8, score=19.4]} {Celegans: WBGene00017016, snap-1, SNAP (Soluble NSF Attachment Protein) homolog, [Score=130, Expect=6e-34]} {Smed: dd_Smed_v6_2480_0_1, dd_Smed_v6_2480_0_1, [Score=111, Expect=4e-27]} {RNA1509_29458} {RNA1310_15661} {RNA815_16299} |
Cumulative graph for MligTC455_26300
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.335 | 4.105 | 0.11831 | 0.70786 | |
| RegionR2 | 0.996 | 4.105 | 0.14850 | 0.48118 | |
| RegionR3 | 0.421 | 4.105 | 0.46405 | 0.97289 | |
| RegionR4 | -0.066 | 4.105 | 0.91746 | 1.00000 | |
| RegionR5 | 0.33 | 4.105 | 0.54531 | 0.90733 | |
| RegionR6 | 1.027 | 4.105 | 0.07217 | 0.49998 | |
| RegionR7 | 0.887 | 4.105 | 0.15268 | 0.72393 | |
| RegionR8 | -1.262 | 4.105 | 0.19201 | 0.78409 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.637 | 4.105 | 0.29141 | 0.98947 | |
| RegenerationR2 | -0.602 | 4.105 | 0.35119 | 0.78249 | |
| RegenerationR3 | 0.732 | 4.105 | 0.28296 | 0.71461 | |
| RegenerationR4 | 0.409 | 4.105 | 0.54753 | 0.89159 | |
| RegenerationR5 | 0.414 | 4.105 | 0.51855 | 0.86868 | |
| RegenerationR6 | 0.471 | 4.105 | 0.46509 | 0.78139 | |
| RegenerationBL | 1.228 | 4.105 | 0.05155 | 0.26157 | |
| RegenerationTP | 1.204 | 4.105 | 0.09811 | 0.48952 |
Genes with expression patterns similar to MligTC455_26300
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_26300 | 687 | 14.31 | Mlig455_042036 | Neo: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_042036 {REF} {Length: 2763} {TRANSSPLICED} {Pfam: Soluble NSF attachment protein, SNAP [PF14938.8, score=311.5]; Tetratricopeptide repeat [PF13424.8, score=33.3]; Tetratricopeptide repeat [PF13371.8, score=19.4]} {Celegans: WBGene00017016, snap-1, SNAP (Soluble NSF Attachment Protein) homolog, [Score=130, Expect=6e-34]} {Smed: dd_Smed_v6_2480_0_1, dd_Smed_v6_2480_0_1, [Score=111, Expect=4e-27]} {RNA1509_29458} {RNA1310_15661} {RNA815_16299} | |
| 2. | MligTC455_26299 | 713 | 14.86 | Mlig455_041963 | Neo: - Age: - |
3.944 | - | 0.979 | 0.972 | 0.995 | 0.998 | - | Mlig455_041963 {REF} {Length: 2813} {TRANSSPLICED} {Pfam: Soluble NSF attachment protein, SNAP [PF14938.8, score=208.5]; Tetratricopeptide repeat [PF13424.8, score=34.4]} {Celegans: WBGene00017016, snap-1, SNAP (Soluble NSF Attachment Protein) homolog, [Score=120, Expect=6e-31]} {Smed: dd_Smed_v6_2480_0_1, dd_Smed_v6_2480_0_1, [Score=110, Expect=2e-27]} {RNA1509_29458} {RNA1310_15661} {RNA815_16299} | |
| 3. | MligTC455_37017 | 345 | 7.2 | Mlig455_035238 | Neo: - Age: - |
1.772 | - | - | - | 0.952 | 0.820 | - | Mlig455_035238 {REF} {Length: 1969} {TRANSSPLICED} {Pfam: Profilin [PF00235.21, score=70.1]} {Celegans: WBGene00003991, pfn-3, Profilin-3, [Score=50.4, Expect=9e-09]} {RNA1509_18199, RNA1509_28431} {RNA1310_37032.1, RNA1509_28431} {RNA1509_28431, RNA815_15418} | |
| 4. | MligTC455_53126 | 3959 | 82.49 | Mlig455_055911 | Neo: - Age: - Region-enriched R5: 1.127/0.00002 |
1.737 | - | - | 0.783 | - | 0.954 | - | Mlig455_055911 {REF} {Length: 1239} {TRANSSPLICED} {Pfam: Universal stress protein family [PF00582.28, score=82.7]} {Smed: dd_Smed_v6_402_1_1, dd_Smed_v6_402_1_1, [Score=121, Expect=6e-36]} {RNA1509_30114, RNA1509_59480} {RNA1310_21533.1, RNA1509_30114} {RNA1509_30114, RNA815_12036.1} | |
| 5. | MligTC455_47139 | 2009 | 41.85 | Mlig455_044514 | Neo: - Age: logFC(26M/2M)=0.379 |
HSPA5 | 1.712 | - | - | - | 0.952 | - | 0.760 | Mlig455_044514 {REF} {Length: 3227} {TRANSSPLICED} {Pfam: Hsp70 protein [PF00012.22, score=111.5]} {Human: ENSG00000044574, HSPA5, heat shock protein family A (Hsp70) member 5, [Score=197, Expect=1e-57]} {Mouse: ENSMUSG00000026864, Hspa5, heat shock protein 5, [Score=199, Expect=3e-58]} {Dmel: FBgn0001218, Hsc70-3, Heat shock 70-kDa protein cognate 3, [Score=186, Expect=7e-54]} {Celegans: WBGene00002007, hsp-3, Heat shock 70 kDa protein C, [Score=190, Expect=2e-58]} {Smed: dd_Smed_v6_2648_0_1, dd_Smed_v6_2648_0_1, [Score=228, Expect=2e-69]} {RNA1509_14123, RNA1509_23097, RNA1509_25501, RNA1509_31115, RNA1509_37821} {RNA1310_10295, RNA1509_14123, RNA1509_23097, RNA1509_31115, RNA1509_37821} {RNA1509_14123, RNA1509_23097, RNA1509_31115, RNA1509_37821, RNA815_3701} |
| 6. | MligTC455_41926 | 237 | 4.94 | Mlig455_005787 | Neo: - Age: - |
0.967 | - | - | - | - | 0.967 | - | Mlig455_005787 {REF} {Length: 2553} {Pfam: Galactose binding lectin domain [PF02140.20, score=58.8]; Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=46.5]} {Dmel: FBgn0033313, Cirl, Calcium-independent receptor for alpha-latrotoxin, [Score=50.1, Expect=3e-06]} {Smed: dd_Smed_v6_13661_0_2, dd_Smed_v6_13661_0_2, [Score=157, Expect=3e-45]} {RNA1509_46948} {RNA1310_24087} {RNA815_12362} | |
| 7. | MligTC455_43197 | 2985 | 62.18 | Mlig455_005091, Mlig455_005219 | Neo: - Age: - Regeneration-upregulated BL: 1.707 Regeneration-enriched BL: 1.707 |
SMARCD1 | 0.966 | - | - | - | 0.966 | - | - | Mlig455_005091 {REF} {Length: 2227} {Pfam: SWIB/MDM2 domain [PF02201.20, score=55.0]} {Human: ENSG00000066117, SMARCD1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, [RH, Score=491, Expect=7e-170]} {Mouse: ENSMUSG00000023018, Smarcd1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, [RH, Score=491, Expect=9e-170]} {Dmel: FBgn0025463, Bap60, Brahma associated protein 60kD, [RH, Score=473, Expect=3e-163]} {Celegans: WBGene00044072, ham-3, [RH, Score=420, Expect=2e-143]} {Smed: dd_Smed_v6_3916_0_1, dd_Smed_v6_3916_0_1, [RH, Score=429, Expect=5e-147]} {RNA1509_5497} {RNA1310_11706, RNA1509_5497} {RNA1509_5497, RNA815_6713} Mlig455_005219 {REF} {Length: 2215} {TRANSSPLICED} {Pfam: SWIB/MDM2 domain [PF02201.20, score=55.0]} {Human: ENSG00000066117, SMARCD1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, [RH, Score=491, Expect=7e-170]} {Mouse: ENSMUSG00000023018, Smarcd1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, [RH, Score=491, Expect=9e-170]} {Dmel: FBgn0025463, Bap60, Brahma associated protein 60kD, [RH, Score=473, Expect=3e-163]} {Celegans: WBGene00044072, ham-3, [RH, Score=420, Expect=2e-143]} {Smed: dd_Smed_v6_3916_0_1, dd_Smed_v6_3916_0_1, [RH, Score=429, Expect=5e-147]} {RNA1509_5497} {RNA1310_11706} {RNA815_6713} |
| 8. | MligTC455_36539 | 229 | 4.78 | Mlig455_048370 | Neo: - Age: - Regeneration-upregulated BL: 2.997 Regeneration-enriched BL: 2.997 |
0.961 | - | - | - | 0.961 | - | - | Mlig455_048370 {REF} {Length: 4535} {RNA1509_25664} {RNA1310_25943, RNA1509_25664} | |
| 9. | MligTC455_45489 | 120 | 2.5 | Mlig455_045790 | Neo: Int S/G2/M Age: Down-Up-Down |
0.959 | - | - | - | - | 0.959 | - | Mlig455_045790 {REF} {Length: 3796} {RNA1509_39375} {RNA1310_2062.2} {RNA815_16661} | |
| 10. | MligTC455_52473 | 801 | 16.68 | Mlig455_049776 | Neo: - Age: logFC(26M/2M)=-0.252 |
TACC2 | 0.959 | - | - | - | 0.959 | - | - | Mlig455_049776 {REF} {Length: 2818} {TRANSSPLICED} {Pfam: Transforming acidic coiled-coil-containing protein (TACC), C-terminal [PF05010.16, score=161.6]; Macoilin family [PF09726.11, score=17.3]} {Human: ENSG00000138162, TACC2, transforming acidic coiled-coil containing protein 2, [RH, Score=145, Expect=7e-36]; ENSG00000147526, TACC1, transforming acidic coiled-coil containing protein 1, [RH, Score=140, Expect=1e-34]; ENSG00000013810, TACC3, transforming acidic coiled-coil containing protein 3, [RH, Score=138, Expect=6e-34]} {Mouse: ENSMUSG00000030852, Tacc2, transforming, acidic coiled-coil containing protein 2, [RH, Score=143, Expect=2e-35]; ENSMUSG00000065954, Tacc1, transforming, acidic coiled-coil containing protein 1, [RH, Score=140, Expect=6e-35]} {Dmel: FBgn0026620, tacc, transforming acidic coiled-coil protein, [RH, Score=95.5, Expect=3e-20]} {Smed: dd_Smed_v6_8744_0_1, dd_Smed_v6_8744_0_1, [Score=130, Expect=8e-34]} {RNA1509_49372} {RNA1310_11356.1, RNA1509_49372} {RNA1509_49372, RNA815_9891.1} |
| 11. | MligTC455_42790 | 860 | 17.92 | Mlig455_001416 | Neo: - Age: - |
WDR5 | 0.958 | - | - | - | 0.958 | - | - | Mlig455_001416 {REF} {Length: 1676} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=206.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=84.4]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=48.2]; Nucleoporin Nup120/160 [PF11715.10, score=46.4]; WD40-like domain [PF17005.7, score=26.5]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=24.5]} {Human: ENSG00000196363, WDR5, WD repeat domain 5, [RH, Score=581, Expect=0.0]} {Mouse: ENSMUSG00000026917, Wdr5, WD repeat domain 5, [RH, Score=581, Expect=0.0]} {Dmel: FBgn0040066, wds, will die slowly, [RH, Score=571, Expect=0.0]} {Celegans: WBGene00006474, wdr-5.1, WD repeat-containing protein wdr-5.1, [RH, Score=460, Expect=5e-163]} {Smed: dd_Smed_v6_2866_0_1, dd_Smed_v6_2866_0_1, [RH, Score=541, Expect=0.0]} {RNA1509_14300, RNA1509_46519} {RNA1310_18453, RNA1509_14300, RNA1509_46519} {RNA1509_14300, RNA1509_46519, RNA815_7409} |
| 12. | MligTC455_45213 | 458 | 9.54 | Mlig455_025798 | Neo: - Age: Up-Down-Down |
PARP1 | 0.958 | - | - | - | 0.958 | - | - | Mlig455_025798 {REF} {Length: 10432} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=238.2]; Ankyrin repeats (many copies) [PF13637.8, score=214.8]; Ankyrin repeat [PF00023.32, score=149.8]; Ankyrin repeats (many copies) [PF13857.8, score=145.5]; Ankyrin repeat [PF13606.8, score=141.7]; Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=77.2]; WGR domain [PF05406.17, score=66.7]; Poly(ADP-ribose) polymerase, regulatory domain [PF02877.16, score=51.9]} {Human: ENSG00000143799, PARP1, poly(ADP-ribose) polymerase 1, [Score=150, Expect=1e-35]} {Mouse: ENSMUSG00000026496, Parp1, poly (ADP-ribose) polymerase family, member 1, [Score=147, Expect=9e-35]} {Dmel: FBgn0010247, Parp, Poly-(ADP-ribose) polymerase, [Score=129, Expect=2e-29]} {Celegans: WBGene00004053, tank-1, Tankyrase-like protein, [RH, Score=188, Expect=4e-47]} {Smed: dd_Smed_v6_10338_0_1, dd_Smed_v6_10338_0_1, [Score=131, Expect=3e-30]} {RNA1509_5179, RNA1509_5717} {RNA1310_174.1, RNA1509_5179, RNA1509_5717} {RNA1509_5179, RNA1509_5717, RNA815_1091} |
| 13. | MligTC455_45595 | 1466 | 30.55 | Mlig455_000888 | Neo: - Age: - |
0.957 | - | - | - | - | 0.957 | - | Mlig455_000888 {REF} {Length: 622} {TRANSSPLICED} {RNA1509_19509} {RNA1310_43792.1, RNA1509_19509} {RNA1509_19509, RNA815_23198.1} | |
| 14. | MligTC455_30095 | 1981 | 41.28 | Mlig455_023711 | Neo: Irradiation Age: - Region-enriched R5: 1.273/0.00042 Regeneration-upregulated BL: 1.666 Regeneration-enriched BL: 1.666 |
NLK | 0.955 | - | - | - | 0.955 | - | - | Mlig455_023711 {REF} {Length: 2780} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=218.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=107.2]; ABC1 atypical kinase-like domain [PF03109.18, score=20.8]; Fungal protein kinase [PF17667.3, score=18.7]; Haspin like kinase domain [PF12330.10, score=18.3]} {Human: ENSG00000087095, NLK, nemo like kinase, [RH, Score=420, Expect=4e-142]} {Mouse: ENSMUSG00000017376, Nlk, nemo like kinase, [RH, Score=420, Expect=3e-142]} {Dmel: FBgn0011817, nmo, nemo, [Score=417, Expect=6e-143]} {Celegans: WBGene00003048, lit-1, Serine/threonine kinase NLK, [RH, Score=394, Expect=5e-131]} {Smed: dd_Smed_v6_4172_0_3, dd_Smed_v6_4172_0_3, [RH, Score=409, Expect=2e-139]} {RNA1509_20758, RNA1509_5850} {RNA1310_6603.1, RNA1509_20758, RNA1509_5850} {RNA1509_20758, RNA1509_5850, RNA815_2023} |
| 15. | MligTC455_41692 | 796 | 16.59 | Mlig455_027848 | Neo: - Age: Down-Up-Down Regeneration-upregulated BL: 1.596 Regeneration-enriched BL: 1.596 |
RNF38 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_027848 {REF} {Length: 2431} {Pfam: Ring finger domain [PF13639.8, score=46.0]; RING-H2 zinc finger domain [PF12678.9, score=31.8]; RING-like zinc finger [PF17123.7, score=31.8]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=29.4]; zinc-RING finger domain [PF14634.8, score=26.6]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=25.6]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=18.4]} {Human: ENSG00000137075, RNF38, ring finger protein 38, [RH, Score=124, Expect=3e-30]} {Mouse: ENSMUSG00000035696, Rnf38, ring finger protein 38, [RH, Score=124, Expect=2e-30]} {Dmel: FBgn0037705, mura, murashka, [RH, Score=131, Expect=4e-32]} {Celegans: WBGene00007226, C01G6.4, [Score=66.2, Expect=1e-12]} {Smed: dd_Smed_v6_2844_0_1, dd_Smed_v6_2844_0_1, [Score=107, Expect=1e-25]} {RNA1509_12746} {RNA1310_9954.1, RNA1509_12746} {RNA1509_12746, RNA815_2293.1} |
| 16. | MligTC455_44888 | 1432 | 29.83 | Mlig455_018517 | Neo: - Age: - Region-enriched R8: 1.419/0.01908 |
LGR6 | 0.953 | - | - | - | 0.953 | - | - | Mlig455_018517 {REF} {Length: 3076} {Pfam: Leucine rich repeat [PF13855.8, score=105.2]; Leucine Rich repeats (2 copies) [PF12799.9, score=62.5]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=30.2]; Leucine-rich repeat [PF14580.8, score=21.2]; Leucine Rich Repeat [PF00560.35, score=19.2]} {Human: ENSG00000133067, LGR6, leucine rich repeat containing G protein-coupled receptor 6, [Score=77.8, Expect=3e-14]; ENSG00000099769, IGFALS, insulin like growth factor binding protein acid labile subunit, [Score=76.6, Expect=6e-14]; ENSG00000131409, LRRC4B, leucine rich repeat containing 4B, [Score=75.9, Expect=1e-13]} {Mouse: ENSMUSG00000050199, Lgr4, leucine-rich repeat-containing G protein-coupled receptor 4, [Score=75.9, Expect=9e-14]; ENSMUSG00000047085, Lrrc4b, leucine rich repeat containing 4B, [Score=75.5, Expect=1e-13]; ENSMUSG00000020105, Lrig3, leucine-rich repeats and immunoglobulin-like domains 3, [Score=72.8, Expect=9e-13]} {Dmel: FBgn0023095, caps, capricious, [Score=73.9, Expect=2e-13]} {Celegans: WBGene00020649, sma-10, Leucine-rich repeats and immunoglobulin-like domains protein sma-10, [Score=74.7, Expect=1e-13]} {Smed: dd_Smed_v6_2769_0_1, dd_Smed_v6_2769_0_1, [Score=105, Expect=1e-23]} {RNA1509_8972} {RNA1310_3884.2, RNA1509_8972} {RNA1509_8972, RNA815_1780} |
| 17. | MligTC455_32459 | 510 | 10.62 | Mlig455_012973 | Neo: - Age: - |
0.95 | - | - | - | 0.950 | - | - | Mlig455_012973 {REF} {Length: 2586} {RNA1310_38015.1} {RNA815_33513} | |
| 18. | MligTC455_39905 | 1292 | 26.92 | Mlig455_032347, Mlig455_032366 | Neo: - Age: - Regeneration-upregulated BL: 1.900 Regeneration-enriched BL: 1.900 |
MTMR2 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_032347 {REF} {Length: 2980} {TRANSSPLICED} {Pfam: Myotubularin-like phosphatase domain [PF06602.16, score=467.7]; Dual specificity phosphatase, catalytic domain [PF00782.22, score=21.9]; GRAM domain [PF02893.22, score=21.4]} {Human: ENSG00000087053, MTMR2, myotubularin related protein 2, [RH, Score=538, Expect=0.0]} {Mouse: ENSMUSG00000031918, Mtmr2, myotubularin related protein 2, [RH, Score=531, Expect=0.0]; ENSMUSG00000031337, Mtm1, X-linked myotubular myopathy gene 1, [RH, Score=505, Expect=2e-173]} {Dmel: FBgn0025742, mtm, myotubularin, [RH, Score=503, Expect=1e-172]} {Celegans: WBGene00003475, mtm-1, Myotubularin-related protein 1, [RH, Score=413, Expect=3e-138]} {Smed: dd_Smed_v6_4948_0_1, dd_Smed_v6_4948_0_1, [RH, Score=404, Expect=7e-135]} {RNA1509_34099} {RNA1310_4997} {RNA815_1735.1} Mlig455_032366 {REF} {Length: 3374} {TRANSSPLICED} {Pfam: Myotubularin-like phosphatase domain [PF06602.16, score=467.6]; Dual specificity phosphatase, catalytic domain [PF00782.22, score=21.8]; GRAM domain [PF02893.22, score=21.4]} {Human: ENSG00000087053, MTMR2, myotubularin related protein 2, [RH, Score=538, Expect=0.0]} {Mouse: ENSMUSG00000031918, Mtmr2, myotubularin related protein 2, [RH, Score=530, Expect=0.0]; ENSMUSG00000031337, Mtm1, X-linked myotubular myopathy gene 1, [RH, Score=504, Expect=4e-173]} {Dmel: FBgn0025742, mtm, myotubularin, [RH, Score=500, Expect=1e-171]} {Celegans: WBGene00003475, mtm-1, Myotubularin-related protein 1, [RH, Score=412, Expect=6e-138]} {Smed: dd_Smed_v6_4948_0_1, dd_Smed_v6_4948_0_1, [RH, Score=398, Expect=2e-132]} {RNA1509_34099, RNA1509_38063, RNA1509_48836, RNA1509_9779} {RNA1310_4997, RNA1509_34099, RNA1509_38063, RNA1509_48836, RNA1509_9779} {RNA1509_34099, RNA1509_38063, RNA1509_48836, RNA1509_9779, RNA815_1735.1} |
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