TomoSeq data search

Data search

Results for MligTC455_44888

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_44888

1432

29.83

Mlig455_018517

Neo: -

Age: -

Region-enriched R8: 1.419/0.01908

LGR6

Mlig455_018517 {REF} {Length: 3076} {Pfam: Leucine rich repeat [PF13855.8, score=105.2]; Leucine Rich repeats (2 copies) [PF12799.9, score=62.5]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=30.2]; Leucine-rich repeat [PF14580.8, score=21.2]; Leucine Rich Repeat [PF00560.35, score=19.2]} {Human: ENSG00000133067, LGR6, leucine rich repeat containing G protein-coupled receptor 6, [Score=77.8, Expect=3e-14]; ENSG00000099769, IGFALS, insulin like growth factor binding protein acid labile subunit, [Score=76.6, Expect=6e-14]; ENSG00000131409, LRRC4B, leucine rich repeat containing 4B, [Score=75.9, Expect=1e-13]} {Mouse: ENSMUSG00000050199, Lgr4, leucine-rich repeat-containing G protein-coupled receptor 4, [Score=75.9, Expect=9e-14]; ENSMUSG00000047085, Lrrc4b, leucine rich repeat containing 4B, [Score=75.5, Expect=1e-13]; ENSMUSG00000020105, Lrig3, leucine-rich repeats and immunoglobulin-like domains 3, [Score=72.8, Expect=9e-13]} {Dmel: FBgn0023095, caps, capricious, [Score=73.9, Expect=2e-13]} {Celegans: WBGene00020649, sma-10, Leucine-rich repeats and immunoglobulin-like domains protein sma-10, [Score=74.7, Expect=1e-13]} {Smed: dd_Smed_v6_2769_0_1, dd_Smed_v6_2769_0_1, [Score=105, Expect=1e-23]} {RNA1509_8972} {RNA1310_3884.2, RNA1509_8972} {RNA1509_8972, RNA815_1780}

Cumulative graph for MligTC455_44888

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.097	5.078	0.91247	1.00000
RegionR2	-0.461	5.078	0.19576	0.55382
RegionR3	-0.187	5.078	0.52365	1.00000
RegionR4	-0.029	5.078	0.93638	1.00000
RegionR5	-0.906	5.078	0.00272	0.02198
RegionR6	-0.21	5.078	0.49222	1.00000
RegionR7	0.471	5.078	0.19645	0.80276
RegionR8	1.419	5.078	0.00030	0.01908

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-7.927	5.078	0.02815	0.61685
RegenerationR2	0.411	5.078	0.18411	0.62669
RegenerationR3	0.578	5.078	0.08146	0.46871
RegenerationR4	0.663	5.078	0.05304	0.37003
RegenerationR5	1.176	5.078	0.00029	0.02690
RegenerationR6	0.996	5.078	0.00269	0.05948
RegenerationBL	0.846	5.078	0.00804	0.08800
RegenerationTP	-0.617	5.078	0.10944	0.50954

Genes with expression patterns similar to MligTC455_44888

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_44888	1432	29.83	Mlig455_018517	Neo: - Age: - Region-enriched R8: 1.419/0.01908	LGR6	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_018517 {REF} {Length: 3076} {Pfam: Leucine rich repeat [PF13855.8, score=105.2]; Leucine Rich repeats (2 copies) [PF12799.9, score=62.5]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=30.2]; Leucine-rich repeat [PF14580.8, score=21.2]; Leucine Rich Repeat [PF00560.35, score=19.2]} {Human: ENSG00000133067, LGR6, leucine rich repeat containing G protein-coupled receptor 6, [Score=77.8, Expect=3e-14]; ENSG00000099769, IGFALS, insulin like growth factor binding protein acid labile subunit, [Score=76.6, Expect=6e-14]; ENSG00000131409, LRRC4B, leucine rich repeat containing 4B, [Score=75.9, Expect=1e-13]} {Mouse: ENSMUSG00000050199, Lgr4, leucine-rich repeat-containing G protein-coupled receptor 4, [Score=75.9, Expect=9e-14]; ENSMUSG00000047085, Lrrc4b, leucine rich repeat containing 4B, [Score=75.5, Expect=1e-13]; ENSMUSG00000020105, Lrig3, leucine-rich repeats and immunoglobulin-like domains 3, [Score=72.8, Expect=9e-13]} {Dmel: FBgn0023095, caps, capricious, [Score=73.9, Expect=2e-13]} {Celegans: WBGene00020649, sma-10, Leucine-rich repeats and immunoglobulin-like domains protein sma-10, [Score=74.7, Expect=1e-13]} {Smed: dd_Smed_v6_2769_0_1, dd_Smed_v6_2769_0_1, [Score=105, Expect=1e-23]} {RNA1509_8972} {RNA1310_3884.2, RNA1509_8972} {RNA1509_8972, RNA815_1780}
2.	MligTC455_26299	713	14.86	Mlig455_041963	Neo: - Age: -		1.764	-	-	-	0.957	-	0.807	Mlig455_041963 {REF} {Length: 2813} {TRANSSPLICED} {Pfam: Soluble NSF attachment protein, SNAP [PF14938.8, score=208.5]; Tetratricopeptide repeat [PF13424.8, score=34.4]} {Celegans: WBGene00017016, snap-1, SNAP (Soluble NSF Attachment Protein) homolog, [Score=120, Expect=6e-31]} {Smed: dd_Smed_v6_2480_0_1, dd_Smed_v6_2480_0_1, [Score=110, Expect=2e-27]} {RNA1509_29458} {RNA1310_15661} {RNA815_16299}
3.	MligTC455_34724	4929	102.68	Mlig455_029265	Neo: Int S/G2/M Age: logFC(26M/2M)=0.253	IGF2BP1	1.726	-	-	-	0.763	0.963	-	Mlig455_029265 {REF} {Length: 1871} {TRANSSPLICED} {Pfam: KH domain [PF00013.31, score=103.7]; KH domain [PF07650.19, score=36.6]; KH domain [PF13083.8, score=33.4]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=27.1]} {Human: ENSG00000159217, IGF2BP1, insulin like growth factor 2 mRNA binding protein 1, [RH, Score=125, Expect=5e-31]; ENSG00000073792, IGF2BP2, insulin like growth factor 2 mRNA binding protein 2, [RH, Score=123, Expect=2e-30]} {Mouse: ENSMUSG00000013415, Igf2bp1, insulin-like growth factor 2 mRNA binding protein 1, [RH, Score=129, Expect=1e-32]; ENSMUSG00000033581, Igf2bp2, insulin-like growth factor 2 mRNA binding protein 2, [RH, Score=125, Expect=1e-31]} {Dmel: FBgn0285926, Imp, IGF-II mRNA-binding protein, [Score=143, Expect=1e-37]} {Celegans: WBGene00010908, zbp-1, Zipcode Binding Protein homolog, [RH, Score=87.0, Expect=2e-18]} {Smed: dd_Smed_v6_3047_0_1, dd_Smed_v6_3047_0_1, [Score=154, Expect=2e-41]} {RNA1509_15136, RNA1509_15998, RNA1509_21756, RNA1509_3179} {RNA1310_15501.1, RNA1509_15136, RNA1509_15998, RNA1509_21756, RNA1509_3179} {RNA1509_15136, RNA1509_15998, RNA1509_21756, RNA1509_3179, RNA815_7080.1}
4.	MligTC455_52304	832	17.34	Mlig455_000381	Neo: - Age: - Regeneration-upregulated BL: 2.051 Regeneration-enriched BL: 2.051	SETD2	1.678	-	-	-	0.728	0.950	-	Mlig455_000381 {REF} {Length: 6671} {TRANSSPLICED} {Pfam: SRI (Set2 Rpb1 interacting) domain [PF08236.13, score=55.4]; AWS domain [PF17907.3, score=41.0]; WW domain [PF00397.28, score=28.1]; SET domain [PF00856.30, score=22.8]} {Human: ENSG00000181555, SETD2, SET domain containing 2, [Score=148, Expect=9e-35]} {Mouse: ENSMUSG00000044791, Setd2, SET domain containing 2, [Score=151, Expect=8e-36]} {Dmel: FBgn0030486, Set2, SET domain containing 2, [Score=119, Expect=4e-26]} {Celegans: WBGene00003040, lin-59, Probable histone-lysine N-methyltransferase lin-59, [Score=73.2, Expect=2e-12]} {Smed: dd_Smed_v6_10742_0_1, dd_Smed_v6_10742_0_1, [Score=157, Expect=5e-38]} {RNA1509_40884, RNA1509_46851} {RNA1310_803, RNA1509_40884} {RNA1509_40884, RNA815_9944}
5.	MligTC455_26300	687	14.31	Mlig455_042036	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.566		0.953	-	-	-	0.953	-	-	Mlig455_042036 {REF} {Length: 2763} {TRANSSPLICED} {Pfam: Soluble NSF attachment protein, SNAP [PF14938.8, score=311.5]; Tetratricopeptide repeat [PF13424.8, score=33.3]; Tetratricopeptide repeat [PF13371.8, score=19.4]} {Celegans: WBGene00017016, snap-1, SNAP (Soluble NSF Attachment Protein) homolog, [Score=130, Expect=6e-34]} {Smed: dd_Smed_v6_2480_0_1, dd_Smed_v6_2480_0_1, [Score=111, Expect=4e-27]} {RNA1509_29458} {RNA1310_15661} {RNA815_16299}
6.	MligTC455_33127	1782	37.12	Mlig455_059339	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_059339 {REF} {Length: 2630} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=38.7]; HMG-box domain [PF09011.12, score=32.9]} {RNA1509_33113, RNA1509_5450} {RNA1310_21659.1, RNA1509_33113} {RNA1509_33113, RNA815_736.1}
7.	MligTC455_33128	1820	37.91	Mlig455_065593	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_065593 {REF} {Length: 2622} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=38.8]; HMG-box domain [PF09011.12, score=32.9]} {RNA1509_16997, RNA1509_20373, RNA1509_22468, RNA1509_29220, RNA1509_5450} {RNA1310_21659.1, RNA1509_16997, RNA1509_20373, RNA1509_22468, RNA1509_29220, RNA1509_5450} {RNA1509_16997, RNA1509_20373, RNA1509_22468, RNA1509_29220, RNA1509_5450, RNA815_736.1}

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