TomoSeq data search

Data search

Results for MligTC455_26674

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_26674

269

5.61

Mlig455_032971

Neo: -

Age: -

Mlig455_032971 {REF} {Length: 1976} {TRANSSPLICED} {RNA1509_55515} {RNA1310_23195.1} {RNA815_9573}

Cumulative graph for MligTC455_26674

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-6.241	2.973	0.10679	0.68417
RegionR2	1.812	2.973	0.01927	0.14956
RegionR3	0.78	2.973	0.34944	0.88438
RegionR4	-0.585	2.973	0.96365	1.00000
RegionR5	0.023	2.973	0.84146	1.00000
RegionR6	0.447	2.973	0.61502	1.00000
RegionR7	1.251	2.973	0.18869	0.79186
RegionR8	2.513	2.973	0.00367	0.10586

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.126	2.973	0.99997	1.00000
RegenerationR2	-0.068	2.973	0.86727	1.00000
RegenerationR3	-0.015	2.973	0.97740	1.00000
RegenerationR4	0.916	2.973	0.08670	0.46325
RegenerationR5	-0.133	2.973	0.78745	0.98418
RegenerationR6	0.045	2.973	0.93821	1.00000
RegenerationBL	-1.122	2.973	0.12433	0.41902
RegenerationTP	0.026	2.973	0.96666	1.00000

Genes with expression patterns similar to MligTC455_26674

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_26674	269	5.61	Mlig455_032971	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_032971 {REF} {Length: 1976} {TRANSSPLICED} {RNA1509_55515} {RNA1310_23195.1} {RNA815_9573}
2.	MligTC455_26673	774	16.13	Mlig455_032922, Mlig455_032937	Neo: - Age: Down-Up-Up Region-enriched R8: 2.231/0.00022		4.768	0.970	0.991	-	0.937	0.943	0.927	Mlig455_032922 {REF} {Length: 1444} {TRANSSPLICED} {Pfam: Coiled-coil domain-containing protein 23 [PF15674.7, score=30.2]} {RNA1509_55515} {RNA1310_23195.1, RNA1509_55515} {RNA1509_55515, RNA815_9573} Mlig455_032937 {REF} {Length: 1441} {TRANSSPLICED} {Pfam: Coiled-coil domain-containing protein 23 [PF15674.7, score=31.3]} {RNA1509_55515} {RNA1310_23195.1} {RNA815_9573}
3.	MligTC455_44795	953	19.85	Mlig455_013497	Neo: - Age: -	LRRC74A	2.506	-	-	0.839	0.951	-	0.716	Mlig455_013497 {REF} {Length: 3050} {Pfam: Leucine Rich repeat [PF13516.8, score=58.5]; EF-hand domain pair [PF13499.8, score=32.4]; EF-hand domain [PF13405.8, score=29.5]; EF hand [PF00036.34, score=27.0]; EF-hand domain pair [PF13833.8, score=23.7]; Leucine Rich repeats (2 copies) [PF12799.9, score=21.6]; EF hand [PF13202.8, score=20.1]} {Human: ENSG00000100565, LRRC74A, leucine rich repeat containing 74A, [Score=125, Expect=4e-30]; ENSG00000187905, LRRC74B, leucine rich repeat containing 74B, [Score=120, Expect=8e-29]} {Mouse: ENSMUSG00000059114, Lrrc74a, leucine rich repeat containing 74A, [Score=132, Expect=1e-32]} {Celegans: WBGene00009201, F28C1.3, Protein phosphatase 1 regulatory subunit 37 homolog, [Score=54.3, Expect=2e-07]} {Smed: dd_Smed_v6_10342_0_1, dd_Smed_v6_10342_0_1, [Score=137, Expect=2e-34]} {RNA1509_9378} {RNA1310_8966} {RNA815_2842}
4.	MligTC455_13293	364	7.59	Mlig455_012562	Neo: - Age: Down-Up-Down	FYN	1.78	-	-	-	0.821	-	0.959	Mlig455_012562 {REF} {Length: 2323} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=272.2]; Protein kinase domain [PF00069.27, score=145.0]; SH2 domain [PF00017.26, score=47.5]; SH3 domain [PF00018.30, score=43.5]; Variant SH3 domain [PF07653.19, score=29.7]; Variant SH3 domain [PF14604.8, score=29.4]; Haspin like kinase domain [PF12330.10, score=21.4]; ABC1 atypical kinase-like domain [PF03109.18, score=18.6]} {Human: ENSG00000010810, FYN, FYN proto-oncogene, Src family tyrosine kinase, [Score=366, Expect=8e-121]; ENSG00000182866, LCK, LCK proto-oncogene, Src family tyrosine kinase, [Score=364, Expect=1e-120]; ENSG00000101336, HCK, HCK proto-oncogene, Src family tyrosine kinase, [Score=357, Expect=5e-118]; ENSG00000176105, YES1, YES proto-oncogene 1, Src family tyrosine kinase, [Score=357, Expect=2e-117]; ENSG00000197122, SRC, SRC proto-oncogene, non-receptor tyrosine kinase, [Score=352, Expect=2e-115]} {Mouse: ENSMUSG00000019843, Fyn, Fyn proto-oncogene, [Score=369, Expect=3e-122]; ENSMUSG00000000409, Lck, lymphocyte protein tyrosine kinase, [Score=365, Expect=6e-121]; ENSMUSG00000014932, Yes1, YES proto-oncogene 1, Src family tyrosine kinase, [Score=357, Expect=2e-117]; ENSMUSG00000027646, Src, Rous sarcoma oncogene, [Score=352, Expect=1e-115]} {Dmel: FBgn0264959, Src42A, Src oncogene at 42A, [Score=361, Expect=1e-119]} {Celegans: WBGene00005077, src-1, Tyrosine protein-kinase src-1, [Score=379, Expect=4e-127]} {Smed: dd_Smed_v6_3363_0_2, dd_Smed_v6_3363_0_2, [Score=431, Expect=1e-147]} {RNA1509_28839} {RNA1310_8178.1} {RNA815_4079.1}
5.	MligTC455_17105	886	18.45	Mlig455_000588, Mlig455_030384	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.310	REEP2	1.778	0.826	-	-	-	-	0.952	Mlig455_000588 {REF} {Length: 1554} {TRANSSPLICED} {Pfam: TB2/DP1, HVA22 family [PF03134.21, score=93.3]} {Human: ENSG00000132563, REEP2, receptor accessory protein 2, [RH, Score=157, Expect=7e-47]} {Mouse: ENSMUSG00000038555, Reep2, receptor accessory protein 2, [RH, Score=154, Expect=3e-46]} {Dmel: FBgn0261564, Reep1, Receptor expression enhancing protein 1, [RH, Score=161, Expect=4e-46]} {Celegans: WBGene00020562, T19C3.4, [Score=132, Expect=4e-38]} {Smed: dd_Smed_v6_5799_0_2, dd_Smed_v6_5799_0_2, [RH, Score=184, Expect=6e-58]} {RNA1509_16926} {RNA1310_20837} {RNA815_8468.1} Mlig455_030384 {REF} {Length: 1551} {TRANSSPLICED} {Pfam: TB2/DP1, HVA22 family [PF03134.21, score=93.3]} {Human: ENSG00000132563, REEP2, receptor accessory protein 2, [RH, Score=157, Expect=7e-47]} {Mouse: ENSMUSG00000038555, Reep2, receptor accessory protein 2, [RH, Score=154, Expect=3e-46]} {Dmel: FBgn0261564, Reep1, Receptor expression enhancing protein 1, [RH, Score=161, Expect=4e-46]} {Celegans: WBGene00020562, T19C3.4, [Score=132, Expect=4e-38]} {Smed: dd_Smed_v6_5799_0_2, dd_Smed_v6_5799_0_2, [RH, Score=184, Expect=6e-58]} {RNA1509_16926, RNA1509_38680} {RNA1310_20837, RNA1509_16926, RNA1509_38680} {RNA1509_16926, RNA1509_38680, RNA815_8468.1}
6.	MligTC455_50744	795	16.56	Mlig455_001649, Mlig455_001716	Neo: - Age: logFC(26M/2M)=-0.294 Region-enriched R2: 1.407/0.04720 Regeneration-downregulated BL: -3.166 Regeneration-depleted BL: -3.166	LRRK2, MFHAS1	1.66	-	-	-	0.950	-	0.710	Mlig455_001649 {REF} {Length: 4143} {Pfam: Leucine rich repeat [PF13855.8, score=79.2]; Leucine Rich repeats (2 copies) [PF12799.9, score=49.9]; Ras family [PF00071.24, score=49.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=47.6]; C-terminal of Roc, COR, domain [PF16095.7, score=38.0]; Leucine Rich Repeat [PF00560.35, score=29.7]; ABC transporter [PF00005.29, score=19.9]} {Human: ENSG00000147324, MFHAS1, malignant fibrous histiocytoma amplified sequence 1, [Score=122, Expect=2e-27]; ENSG00000285022, AC270282.1, malignant fibrous histiocytoma amplified sequence 1, [Score=122, Expect=2e-27]} {Mouse: ENSMUSG00000070056, Mfhas1, malignant fibrous histiocytoma amplified sequence 1, [Score=109, Expect=7e-24]} {Dmel: FBgn0038504, Sur-8, [Score=71.6, Expect=2e-12]} {Celegans: WBGene00016974, lron-15, ELRR (Extracellular Leucine-Rich Repeat) ONly, [Score=75.5, Expect=2e-13]} {Smed: dd_Smed_v6_14500_0_1, dd_Smed_v6_14500_0_1, [RH, Score=376, Expect=1e-113]} {RNA1509_6354} {RNA1310_2733, RNA1509_6354} {RNA1509_6354, RNA815_800} Mlig455_001716 {REF} {Length: 3568} {Pfam: Leucine rich repeat [PF13855.8, score=75.4]; Ras family [PF00071.24, score=48.8]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=47.7]; Leucine Rich repeats (2 copies) [PF12799.9, score=47.1]; C-terminal of Roc, COR, domain [PF16095.7, score=38.1]; Leucine Rich Repeat [PF00560.35, score=29.2]; ABC transporter [PF00005.29, score=19.8]} {Human: ENSG00000188906, LRRK2, leucine rich repeat kinase 2, [Score=85.5, Expect=4e-16]} {Mouse: ENSMUSG00000036273, Lrrk2, leucine-rich repeat kinase 2, [Score=85.5, Expect=3e-16]; ENSMUSG00000073375, Lrrc30, leucine rich repeat containing 30, [Score=82.4, Expect=1e-16]} {Dmel: FBgn0038504, Sur-8, [Score=63.5, Expect=8e-10]} {Celegans: WBGene00016974, lron-15, ELRR (Extracellular Leucine-Rich Repeat) ONly, [Score=72.4, Expect=1e-12]} {Smed: dd_Smed_v6_14500_0_1, dd_Smed_v6_14500_0_1, [Score=283, Expect=8e-81]} {RNA1509_6354} {RNA1310_2733} {RNA815_800}
7.	MligTC455_50588	219	4.57	Mlig455_064802	Neo: - Age: logFC(26M/2M)=-0.282	AP1M1	0.973	-	-	-	-	-	0.973	Mlig455_064802 {REF} {Length: 3471} {TRANSSPLICED} {Pfam: Adaptor complexes medium subunit family [PF00928.23, score=301.8]; Clathrin adaptor complex small chain [PF01217.22, score=29.3]} {Human: ENSG00000072958, AP1M1, adaptor related protein complex 1 subunit mu 1, [RH, Score=712, Expect=0.0]} {Mouse: ENSMUSG00000003033, Ap1m1, adaptor-related protein complex AP-1, mu subunit 1, [RH, Score=710, Expect=0.0]} {Dmel: FBgn0024833, AP-1mu, Adaptor Protein complex 1, mu subunit, [RH, Score=716, Expect=0.0]} {Celegans: WBGene00006829, unc-101, AP-1 complex subunit mu-1-I, [RH, Score=667, Expect=0.0]} {Smed: dd_Smed_v6_2650_0_1, dd_Smed_v6_2650_0_1, [RH, Score=709, Expect=0.0]} {RNA1509_11098, RNA1509_14552, RNA1509_23021, RNA1509_36981, RNA1509_46900, RNA1509_56018} {RNA1310_24994.1, RNA1509_11098, RNA1509_14552, RNA1509_23021, RNA1509_36981, RNA1509_46900, RNA1509_56018} {RNA1509_11098, RNA1509_14552, RNA1509_23021, RNA1509_36981, RNA1509_46900, RNA1509_56018, RNA815_5547}
8.	MligTC455_50997	359	7.47	Mlig455_002111	Neo: - Age: Down-Up-Down Regeneration-downregulated BL: -7.003 Regeneration-depleted BL: -7.003	TRIM71	0.963	-	-	-	0.963	-	-	Mlig455_002111 {REF} {Length: 2323} {Pfam: NHL repeat [PF01436.23, score=53.3]} {Human: ENSG00000206557, TRIM71, tripartite motif containing 71, [Score=59.3, Expect=5e-09]} {Mouse: ENSMUSG00000079259, Trim71, tripartite motif-containing 71, [Score=61.2, Expect=9e-10]} {Dmel: FBgn0265356, tn, thin, [Score=72.0, Expect=2e-13]} {Celegans: WBGene00003559, ncl-1, B-box type zinc finger protein ncl-1, [Score=56.2, Expect=2e-08]} {Smed: dd_Smed_v6_13659_0_1, dd_Smed_v6_13659_0_1, [Score=64.7, Expect=2e-11]} {RNA1509_17378} {RNA1310_19512.2} {RNA815_7968}
9.	MligTC455_25395	2547	53.06	Mlig455_012103, Mlig455_029022	Neo: - Age: -	SLC46A3	0.955	-	-	-	0.955	-	-	Mlig455_012103 {REF} {Length: 2488} {Pfam: Major Facilitator Superfamily [PF07690.18, score=64.5]} {Human: ENSG00000139508, SLC46A3, solute carrier family 46 member 3, [Score=139, Expect=2e-35]; ENSG00000076351, SLC46A1, solute carrier family 46 member 1, [Score=135, Expect=4e-34]} {Mouse: ENSMUSG00000020829, Slc46a1, solute carrier family 46, member 1, [Score=146, Expect=5e-38]} {Celegans: WBGene00021159, Y4C6B.5, [Score=50.1, Expect=3e-06]} {Smed: dd_Smed_v6_5528_0_1, dd_Smed_v6_5528_0_1, [Score=179, Expect=2e-50]} {RNA1509_18925, RNA1509_45956} {RNA1310_14130.1, RNA1509_18925, RNA1509_45956} {RNA1509_18925, RNA1509_45956, RNA815_4522} Mlig455_029022 {REF} {Length: 2776} {Pfam: Major Facilitator Superfamily [PF07690.18, score=64.1]} {Human: ENSG00000139508, SLC46A3, solute carrier family 46 member 3, [Score=142, Expect=2e-36]; ENSG00000076351, SLC46A1, solute carrier family 46 member 1, [Score=135, Expect=4e-34]} {Mouse: ENSMUSG00000020829, Slc46a1, solute carrier family 46, member 1, [Score=146, Expect=4e-38]} {Celegans: WBGene00021159, Y4C6B.5, [Score=50.1, Expect=3e-06]} {Smed: dd_Smed_v6_5528_0_1, dd_Smed_v6_5528_0_1, [Score=179, Expect=3e-50]} {RNA1509_18925} {RNA1310_14130.2} {RNA815_4522}
10.	MligTC455_39833	519	10.82	Mlig455_018031	Neo: - Age: -	CKMT2	0.955	0.955	-	-	-	-	-	Mlig455_018031 {REF} {Length: 2867} {Pfam: ATP:guanido phosphotransferase, C-terminal catalytic domain [PF00217.21, score=249.7]; ATP:guanido phosphotransferase, N-terminal domain [PF02807.17, score=73.8]} {Human: ENSG00000131730, CKMT2, creatine kinase, mitochondrial 2, [RH, Score=278, Expect=3e-86]; ENSG00000104879, CKM, creatine kinase, M-type, [RH, Score=275, Expect=1e-85]; ENSG00000237289, CKMT1B, creatine kinase, mitochondrial 1B, [RH, Score=266, Expect=7e-82]; ENSG00000223572, CKMT1A, creatine kinase, mitochondrial 1A, [RH, Score=266, Expect=7e-82]} {Mouse: ENSMUSG00000021622, Ckmt2, creatine kinase, mitochondrial 2, [RH, Score=276, Expect=8e-86]; ENSMUSG00000000308, Ckmt1, creatine kinase, mitochondrial 1, ubiquitous, [RH, Score=270, Expect=2e-83]} {Dmel: FBgn0000116, Argk, Arginine kinase, [Score=270, Expect=2e-84]} {Celegans: WBGene00018519, F46H5.3, Probable arginine kinase F46H5.3, [Score=272, Expect=9e-85]} {Smed: dd_Smed_v6_67158_0_1, dd_Smed_v6_67158_0_1, [Score=189, Expect=3e-55]} {RNA1509_18119, RNA1509_26557, RNA1509_51806} {RNA1310_2253.2, RNA1509_18119, RNA1509_51806} {RNA1509_18119, RNA1509_51806, RNA815_891.1}
11.	MligTC455_45527	2426	50.54	Mlig455_045403	Neo: - Age: logFC(26M/2M)=-0.359	GGT1	0.955	-	-	-	0.955	-	-	Mlig455_045403 {REF} {Length: 2378} {Pfam: Gamma-glutamyltranspeptidase [PF01019.23, score=514.6]} {Human: ENSG00000100031, GGT1, gamma-glutamyltransferase 1, [RH, Score=403, Expect=2e-133]} {Mouse: ENSMUSG00000006345, Ggt1, gamma-glutamyltransferase 1, [RH, Score=389, Expect=5e-128]} {Dmel: FBgn0030796, CG4829, [RH, Score=332, Expect=1e-104]} {Celegans: WBGene00016906, C53D5.5, [RH, Score=372, Expect=7e-121]} {Smed: dd_Smed_v6_4591_0_1, dd_Smed_v6_4591_0_1, [RH, Score=425, Expect=6e-142]} {RNA1509_21080, RNA1509_24704, RNA1509_35437} {RNA1310_10883.2, RNA1509_21080, RNA1509_24704, RNA1509_35437} {RNA1509_21080, RNA1509_24704, RNA1509_35437, RNA815_3555.1}

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