TomoSeq data search

Data search

Results for MligTC455_26689

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_26689

104

2.16

Mlig455_053175

Neo: -

Age: -

PIF1

Mlig455_053175 {REF} {Length: 5153} {Pfam: PIF1-like helicase [PF05970.16, score=23.2]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=57.8, Expect=4e-08]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=73.6, Expect=2e-13]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=59.3, Expect=3e-09]} {RNA1509_56606} {RNA1310_6101.1} {RNA815_2733.1}

Cumulative graph for MligTC455_26689

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-3.24	1.92	0.99962	1.00000
RegionR2	3.37	1.92	0.02553	0.17906
RegionR3	1.236	1.92	0.47859	0.98196
RegionR4	1.763	1.92	0.24951	0.54874
RegionR5	1.471	1.92	0.41733	0.77696
RegionR6	-0.88	1.92	0.96345	1.00000
RegionR7	-1.843	1.92	0.99983	1.00000
RegionR8	-1.878	1.92	0.99979	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	2.568	1.92	0.67910	1.00000
RegenerationR2	0.41	1.92	0.59706	0.91442
RegenerationR3	2.198	1.92	0.07439	0.45539
RegenerationR4	1.971	1.92	0.06399	0.40404
RegenerationR5	2.27	1.92	0.04013	0.33003
RegenerationR6	4.163	1.92	0.01030	0.12528
RegenerationBL	4.731	1.92	0.00920	0.09576
RegenerationTP	5.431	1.92	0.01795	0.22975

Genes with expression patterns similar to MligTC455_26689

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_26689	104	2.16	Mlig455_053175	Neo: - Age: -	PIF1	4	-	-	1.000	1.000	1.000	1.000	Mlig455_053175 {REF} {Length: 5153} {Pfam: PIF1-like helicase [PF05970.16, score=23.2]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=57.8, Expect=4e-08]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=73.6, Expect=2e-13]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=59.3, Expect=3e-09]} {RNA1509_56606} {RNA1310_6101.1} {RNA815_2733.1}
2.	MligTC455_11497	60	1.24	Mlig455_038567	Neo: - Age: -		3.415	-	-	0.890	0.812	0.965	0.748	Mlig455_038567 {REF} {Length: 443} {NoTransDecoderORF} {RNA1509_51837} {RNA1310_23145} {RNA815_41033.2}
3.	MligTC455_29260	139	2.9	Mlig455_017645	Neo: - Age: logFC(26M/2M)=0.941		2.679	-	-	0.769	-	0.956	0.954	Mlig455_017645 {REF} {Length: 9122} {Pfam: Zinc knuckle [PF00098.25, score=34.2]} {Celegans: WBGene00017210, F07E5.5, [Score=53.5, Expect=3e-07]} {RNA1509_9188} {RNA1310_234.1} {RNA815_23.1}
4.	MligTC455_28281	261	5.44	Mlig455_038001, Mlig455_038004	Neo: - Age: logFC(26M/2M)=1.320		1.839	-	-	0.956	-	-	0.883	Mlig455_038001 {REF} {Length: 3662} {tRNA: Val(CAC),pseudo, score=27.5} {RNA1509_18349} {RNA1310_29429.1} {RNA815_17990} Mlig455_038004 {REF} {Length: 5974} {tRNA: Val(CAC),pseudo, score=27.5} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=51.2]; DDHD domain [PF02862.19, score=28.2]; SIT4 phosphatase-associated protein [PF04499.17, score=21.1]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=47.0, Expect=2e-06]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}
5.	MligTC455_27859	118	2.45	Mlig455_066646	Neo: - Age: Up-Down-Up	NUDCD1	1.838	-	-	-	-	0.951	0.887	Mlig455_066646 {REF} {Length: 4075} {TRANSSPLICED} {Pfam: CS domain [PF04969.18, score=25.8]} {Human: ENSG00000120526, NUDCD1, NudC domain containing 1, [Score=166, Expect=1e-44]} {Mouse: ENSMUSG00000038736, Nudcd1, NudC domain containing 1, [Score=157, Expect=8e-42]} {Dmel: FBgn0030342, CG10347, [Score=61.6, Expect=7e-10]} {RNA1509_9333} {RNA1310_9303.1} {RNA815_4347}
6.	MligTC455_38476	437	9.11	Mlig455_006464	Neo: - Age: logFC(26M/2M)=-0.343	ESPNL	1.708	-	-	-	0.746	0.962	-	Mlig455_006464 {REF} {Length: 3836} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=122.2]; Ankyrin repeats (many copies) [PF13637.8, score=89.0]; Ankyrin repeats (many copies) [PF13857.8, score=69.1]; Ankyrin repeat [PF13606.8, score=57.6]; Ankyrin repeat [PF00023.32, score=40.2]} {Human: ENSG00000144488, ESPNL, espin like, [RH, Score=131, Expect=4e-31]} {Mouse: ENSMUSG00000049515, Espnl, espin-like, [RH, Score=129, Expect=1e-30]; ENSMUSG00000028943, Espn, espin, [RH, Score=125, Expect=2e-29]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=85.9, Expect=7e-17]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=92.4, Expect=5e-19]} {Smed: dd_Smed_v6_14434_0_1, dd_Smed_v6_14434_0_1, [RH, Score=112, Expect=8e-26]} {RNA1509_15655} {RNA1310_12610} {RNA815_27159.1}
7.	MligTC455_31856	129	2.69	Mlig455_006432	Neo: - Age: Up-Up-Down		1.706	-	-	-	-	0.750	0.956	Mlig455_006432 {REF} {Length: 5683} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=32.0]} {RNA1509_44743} {RNA1310_5450.1} {RNA815_16253.2}
8.	MligTC455_17826	46	0.96	Mlig455_058007, Mlig455_058200	Neo: - Age: Up-Down-Down		1.704	-	-	-	-	0.962	0.742	Mlig455_058007 {REF} {Length: 2671} {Pfam: Ephrin [PF00812.19, score=47.2]} {Mouse: ENSMUSG00000031217, Efnb1, ephrin B1, [RH, Score=55.8, Expect=1e-08]} {RNA1310_27470} {RNA815_23494} Mlig455_058200 {REF} {Length: 3117} {Pfam: Ephrin [PF00812.19, score=47.1]} {Mouse: ENSMUSG00000031217, Efnb1, ephrin B1, [RH, Score=55.8, Expect=9e-09]} {RNA1310_27470} {RNA815_32142}
9.	MligTC455_23771	562	11.71	Mlig455_001066	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.497 Regeneration-downregulated R6: -1.893 Regeneration-depleted R6: -1.893		0.965	-	-	-	-	0.965	-	Mlig455_001066 {REF} {Length: 2450} {RNA1509_11279, RNA1509_32795, RNA1509_36849} {RNA1310_11231, RNA1509_11279, RNA1509_32795, RNA1509_36849} {RNA1509_11279, RNA1509_32795, RNA1509_36849, RNA815_3393}
10.	MligTC455_30834	130	2.72	Mlig455_058052	Neo: - Age: Up-Up-Down, logFC(26M/2M)=1.183	HDAC11	0.965	-	-	-	-	0.965	-	Mlig455_058052 {REF} {Length: 12455} {Pfam: Histone deacetylase domain [PF00850.21, score=140.8]} {Human: ENSG00000163517, HDAC11, histone deacetylase 11, [Score=310, Expect=8e-103]} {Mouse: ENSMUSG00000034245, Hdac11, histone deacetylase 11, [Score=308, Expect=6e-102]} {Dmel: FBgn0051119, HDAC11, Histone deacetylase 11, [Score=263, Expect=2e-84]} {Celegans: WBGene00007953, hda-11, Histone DeAcetylase, [Score=225, Expect=3e-70]} {Smed: dd_Smed_v6_3401_0_4, dd_Smed_v6_3401_0_4, [Score=248, Expect=3e-79]} {RNA1509_12648} {RNA1310_37725.1} {RNA815_2054.1}
11.	MligTC455_40668	165	3.45	Mlig455_016268	Neo: - Age: -		0.956	-	-	-	-	0.956	-	Mlig455_016268 {REF} {Length: 794} {RNA1509_47841} {RNA1310_11055} {RNA815_24189}
12.	MligTC455_08607	56	1.17	Mlig455_044643	Neo: - Age: -	B3GALT5	0.955	-	-	-	-	0.955	-	Mlig455_044643 {REF} {Length: 2468} {Pfam: Galactosyltransferase [PF01762.23, score=99.2]} {Human: ENSG00000183778, B3GALT5, beta-1,3-galactosyltransferase 5, [Score=90.1, Expect=9e-20]; ENSG00000237172, B3GNT9, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9, [Score=89.7, Expect=3e-19]; ENSG00000156966, B3GNT7, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7, [Score=89.0, Expect=5e-19]} {Mouse: ENSMUSG00000069920, B3gnt9, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9, [Score=87.4, Expect=1e-18]; ENSMUSG00000079445, B3gnt7, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7, [Score=87.0, Expect=2e-18]; ENSMUSG00000074892, B3galt5, UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5, [Score=86.3, Expect=1e-18]; ENSMUSG00000033849, B3galt2, UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2, [Score=83.2, Expect=3e-17]} {Dmel: FBgn0000221, brn, brainiac, [Score=100, Expect=1e-23]} {Celegans: WBGene00007104, B0024.15, Hexosyltransferase, [Score=66.6, Expect=4e-12]} {Smed: dd_Smed_v6_9789_0_1, dd_Smed_v6_9789_0_1, [Score=100, Expect=8e-24]} {RNA1509_9817} {RNA1310_37269} {RNA815_21699}
13.	MligTC455_30272	339	7.06	Mlig455_003363, Mlig455_042254, Mlig455_062169	Neo: - Age: Up-Up-Down		0.955	-	-	-	-	0.955	-	Mlig455_003363 {REF} {Length: 1628} {Celegans: WBGene00016348, C33E10.6, [RH, Score=272, Expect=9e-81]} {Smed: dd_Smed_v6_9974_1_7, dd_Smed_v6_9974_1_7, [Score=253, Expect=6e-77]} {RNA1509_5039} {RNA1310_3396.1} {RNA815_1342.1} Mlig455_042254 {REF} {Length: 322} {Celegans: WBGene00022511, ZC53.4, [Score=69.3, Expect=5e-15]} {RNA1509_5039} {RNA1310_3396.1} {RNA815_1342.1} Mlig455_062169 {REF} {Length: 1903} {Pfam: Recombination endonuclease VII [PF02945.17, score=32.1]} {Celegans: WBGene00022511, ZC53.4, [RH, Score=281, Expect=5e-83]} {Smed: dd_Smed_v6_9974_1_5, dd_Smed_v6_9974_1_5, [Score=262, Expect=1e-79]} {RNA1509_19771, RNA1509_5039} {RNA1310_3396.1, RNA1509_19771} {RNA1509_19771, RNA815_1342.1}
14.	MligTC455_31862	185	3.86	Mlig455_010898	Neo: - Age: Up-Down-Down	HCRTR1	0.954	-	-	-	-	-	0.954	Mlig455_010898 {REF} {Length: 3607} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=152.1]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=28.5]} {Human: ENSG00000121764, HCRTR1, hypocretin receptor 1, [Score=100, Expect=2e-22]; ENSG00000110148, CCKBR, cholecystokinin B receptor, [Score=100, Expect=2e-22]; ENSG00000186867, QRFPR, pyroglutamylated RFamide peptide receptor, [Score=96.3, Expect=4e-21]; ENSG00000163394, CCKAR, cholecystokinin A receptor, [Score=96.3, Expect=4e-21]; ENSG00000162009, SSTR5, somatostatin receptor 5, [Score=95.9, Expect=3e-21]} {Mouse: ENSMUSG00000028778, Hcrtr1, hypocretin (orexin) receptor 1, [Score=108, Expect=1e-25]} {Dmel: FBgn0038880, SIFaR, SIFamide receptor, [Score=95.5, Expect=9e-21]} {Celegans: WBGene00013187, npr-34, NeuroPeptide Receptor family, [RH, Score=131, Expect=7e-33]} {Smed: dd_Smed_v6_56182_0_1, dd_Smed_v6_56182_0_1, [Score=135, Expect=2e-37]} {RNA1509_56148} {RNA1310_5450.1} {RNA815_7136.1}
15.	MligTC455_12054	131	2.72	Mlig455_044496	Neo: - Age: -		0.953	-	-	-	-	-	0.953	Mlig455_044496 {REF} {Length: 776} {NoTransDecoderORF} {RNA1509_16540} {RNA1310_24195.2} {RNA815_7718}
16.	MligTC455_36066	190	3.96	Mlig455_055150	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_055150 {REF} {Length: 4368} {TRANSSPLICED} {RNA1509_38168} {RNA1310_732.1, RNA1509_38168} {RNA1509_38168, RNA815_9144}
17.	MligTC455_39000	222	4.62	Mlig455_055114	Neo: - Age: - Region-enriched R8: 3.634/0.01137		0.953	-	-	-	-	0.953	-	Mlig455_055114 {REF} {Length: 3533} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=21.4]} {Smed: dd_Smed_v6_14472_0_32, dd_Smed_v6_14472_0_32, [Score=47.8, Expect=5e-09]} {RNA1509_7715} {RNA1310_20361} {RNA815_2054.1}
18.	MligTC455_05534	53	1.09	Mlig455_022209	Neo: - Age: -		0.95	-	-	-	-	-	0.950	Mlig455_022209 {REF} {Length: 1138} {NoTransDecoderORF} {RNA1509_30535, RNA1509_33187} {RNA1310_15716.1, RNA1509_30535} {RNA1509_30535, RNA815_44681}

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