M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_30834

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_30834 130 2.72 Mlig455_058052

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=1.183

 HDAC11 Mlig455_058052 {REF} {Length: 12455} {Pfam: Histone deacetylase domain [PF00850.21, score=140.8]} {Human: ENSG00000163517, HDAC11, histone deacetylase 11, [Score=310, Expect=8e-103]} {Mouse: ENSMUSG00000034245, Hdac11, histone deacetylase 11, [Score=308, Expect=6e-102]} {Dmel: FBgn0051119, HDAC11, Histone deacetylase 11, [Score=263, Expect=2e-84]} {Celegans: WBGene00007953, hda-11, Histone DeAcetylase, [Score=225, Expect=3e-70]} {Smed: dd_Smed_v6_3401_0_4, dd_Smed_v6_3401_0_4, [Score=248, Expect=3e-79]} {RNA1509_12648} {RNA1310_37725.1} {RNA815_2054.1}

Cumulative graph for MligTC455_30834

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.267 2.136 0.90697 1.00000
RegionR2 1.439 2.136 0.42199 0.81282
RegionR3 0.761 2.136 0.60361 1.00000
RegionR4 0.821 2.136 0.51229 0.83840
RegionR5 0.352 2.136 0.70973 1.00000
RegionR6 -0.851 2.136 0.98502 1.00000
RegionR7 -1.307 2.136 0.99785 1.00000
RegionR8 -1.48 2.136 0.71084 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -3.536 2.136 0.70892 1.00000
RegenerationR2 2.557 2.136 0.02435 0.25700
RegenerationR3 1.472 2.136 0.30202 0.73331
RegenerationR4 1.463 2.136 0.28360 0.72877
RegenerationR5 2.32 2.136 0.08803 0.45715
RegenerationR6 2.957 2.136 0.09310 0.37938
RegenerationBL 1.983 2.136 0.36682 0.73519
RegenerationTP 5.049 2.136 0.02969 0.28946


Genes with expression patterns similar to MligTC455_30834

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_30834 130 2.72 Mlig455_058052

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=1.183

 HDAC11 4 - - 1.000 1.000 1.000 1.000 Mlig455_058052 {REF} {Length: 12455} {Pfam: Histone deacetylase domain [PF00850.21, score=140.8]} {Human: ENSG00000163517, HDAC11, histone deacetylase 11, [Score=310, Expect=8e-103]} {Mouse: ENSMUSG00000034245, Hdac11, histone deacetylase 11, [Score=308, Expect=6e-102]} {Dmel: FBgn0051119, HDAC11, Histone deacetylase 11, [Score=263, Expect=2e-84]} {Celegans: WBGene00007953, hda-11, Histone DeAcetylase, [Score=225, Expect=3e-70]} {Smed: dd_Smed_v6_3401_0_4, dd_Smed_v6_3401_0_4, [Score=248, Expect=3e-79]} {RNA1509_12648} {RNA1310_37725.1} {RNA815_2054.1}
2. MligTC455_36065 889 18.53 Mlig455_014334, Mlig455_020356, Mlig455_031898, Mlig455_036772, Mlig455_060660

Neo: -

Age: -

 2.471 - - 0.796 - 0.960 0.715

Mlig455_014334 {REF} {Length: 1229} {Pfam: Integrase core domain [PF00665.28, score=28.6]} {Smed: dd_Smed_v6_11155_0_5, dd_Smed_v6_11155_0_5, [Score=59.3, Expect=7e-11]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}

Mlig455_020356 {REF} {Length: 6131} {Celegans: WBGene00016348, C33E10.6, [RH, Score=286, Expect=1e-84]} {Smed: dd_Smed_v6_9974_1_2, dd_Smed_v6_9974_1_2, [Score=300, Expect=3e-90]} {RNA1509_28643} {RNA1310_576.1} {RNA815_1671.1}

Mlig455_031898 {REF} {Length: 1129} {Pfam: Integrase core domain [PF00665.28, score=21.1]} {Smed: dd_Smed_v6_11155_0_2, dd_Smed_v6_11155_0_2, [Score=54.3, Expect=2e-10]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}

Mlig455_036772 {REF} {Length: 1339} {Pfam: Integrase core domain [PF00665.28, score=34.8]} {Smed: dd_Smed_v6_11155_0_1, dd_Smed_v6_11155_0_1, [Score=57.4, Expect=4e-10]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}

Mlig455_060660 {REF} {Length: 921} {Pfam: Integrase core domain [PF00665.28, score=33.9]} {Smed: dd_Smed_v6_11155_0_6, dd_Smed_v6_11155_0_6, [Score=56.6, Expect=6e-10]} {RNA1509_21400} {RNA1310_6101.1} {RNA815_23595}
3. MligTC455_23771 562 11.71 Mlig455_001066

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.497

Regeneration-downregulated R6: -1.893

Regeneration-depleted R6: -1.893

 1.762 - - - - 0.979 0.783 Mlig455_001066 {REF} {Length: 2450} {RNA1509_11279, RNA1509_32795, RNA1509_36849} {RNA1310_11231, RNA1509_11279, RNA1509_32795, RNA1509_36849} {RNA1509_11279, RNA1509_32795, RNA1509_36849, RNA815_3393}
4. MligTC455_28977 735 15.3 Mlig455_000572, Mlig455_003191, Mlig455_003290, Mlig455_016496, Mlig455_022341, Mlig455_023424, Mlig455_023450, Mlig455_032331

Neo: -

Age: -

Region-enriched R4: 4.319/0.02249

 1.758 - - - - 0.964 0.794

Mlig455_000572 {REF} {Length: 460} {NoTransDecoderORF} {RNA1509_41508} {RNA1310_1800.1} {RNA815_49293}

Mlig455_003191 {REF} {Length: 879} {NoTransDecoderORF} {RNA1509_47311} {RNA1310_1800.1} {RNA815_49293}

Mlig455_003290 {REF} {Length: 984} {NoTransDecoderORF} {RNA1509_39623} {RNA1310_1800.1} {RNA815_49293}

Mlig455_016496 {REF} {Length: 959} {RNA1509_39623} {RNA1310_1800.1} {RNA815_49293}

Mlig455_022341 {REF} {Length: 1260} {NoTransDecoderORF} {RNA1509_39623} {RNA1310_1800.1} {RNA815_49293}

Mlig455_023424 {REF} {Length: 1153} {NoTransDecoderORF} {RNA1509_39623} {RNA1310_1800.1} {RNA815_49293}

Mlig455_023450 {REF} {Length: 1739} {RNA1509_39623} {RNA1310_1800.1} {RNA815_49293}

Mlig455_032331 {REF} {Length: 855} {NoTransDecoderORF} {RNA1509_47311} {RNA1310_1800.1} {RNA815_49293}
5. MligTC455_17826 46 0.96 Mlig455_058007, Mlig455_058200

Neo: -

Age: Up-Down-Down

 1.753 - - - - 0.959 0.794

Mlig455_058007 {REF} {Length: 2671} {Pfam: Ephrin [PF00812.19, score=47.2]} {Mouse: ENSMUSG00000031217, Efnb1, ephrin B1, [RH, Score=55.8, Expect=1e-08]} {RNA1310_27470} {RNA815_23494}

Mlig455_058200 {REF} {Length: 3117} {Pfam: Ephrin [PF00812.19, score=47.1]} {Mouse: ENSMUSG00000031217, Efnb1, ephrin B1, [RH, Score=55.8, Expect=9e-09]} {RNA1310_27470} {RNA815_32142}
6. MligTC455_37718 606 12.62 Mlig455_020685, Mlig455_024415, Mlig455_032310, Mlig455_033332, Mlig455_047018, Mlig455_056964

Neo: -

Age: -

 1.751 - - - - 0.981 0.770

Mlig455_020685 {REF} {Length: 2294} {RNA1509_57867} {RNA1310_1374.1} {RNA815_23786}

Mlig455_024415 {REF} {Length: 2109} {RNA1509_57867} {RNA1310_1374.1} {RNA815_23786}

Mlig455_032310 {REF} {Length: 201} {NoTransDecoderORF} {RNA1509_57867} {RNA1310_21106} {RNA815_43995.2}

Mlig455_033332 {REF} {Length: 2377} {RNA1509_57867} {RNA1310_24332} {RNA815_23786}

Mlig455_047018 {REF} {Length: 1021} {TRANSSPLICED} {RNA1509_47311} {RNA1310_36606.2} {RNA815_21848}

Mlig455_056964 {REF} {Length: 2243} {RNA1509_40552} {RNA1310_1374.1} {RNA815_23786}
7. MligTC455_29260 139 2.9 Mlig455_017645

Neo: -

Age: logFC(26M/2M)=0.941

 1.726 - - 0.766 - 0.960 - Mlig455_017645 {REF} {Length: 9122} {Pfam: Zinc knuckle [PF00098.25, score=34.2]} {Celegans: WBGene00017210, F07E5.5, [Score=53.5, Expect=3e-07]} {RNA1509_9188} {RNA1310_234.1} {RNA815_23.1}
8. MligTC455_28314 301 6.27 Mlig455_041681, Mlig455_070191

Neo: -

Age: -

 1.698 - - 0.740 - 0.958 -

Mlig455_041681 {REF} {Length: 5292} {Pfam: Adenovirus late L2 mu core protein (Protein X) [PF05829.14, score=23.6]} {RNA1509_28643} {RNA1310_576.1} {RNA815_2733.1}

Mlig455_070191 {REF} {Length: 961} {Pfam: Integrase core domain [PF00665.28, score=28.3]} {Smed: dd_Smed_v6_11155_0_1, dd_Smed_v6_11155_0_1, [Score=59.3, Expect=7e-11]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}
9. MligTC455_38476 437 9.11 Mlig455_006464

Neo: -

Age: logFC(26M/2M)=-0.343

 ESPNL 1.681 - - - - 0.952 0.729 Mlig455_006464 {REF} {Length: 3836} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=122.2]; Ankyrin repeats (many copies) [PF13637.8, score=89.0]; Ankyrin repeats (many copies) [PF13857.8, score=69.1]; Ankyrin repeat [PF13606.8, score=57.6]; Ankyrin repeat [PF00023.32, score=40.2]} {Human: ENSG00000144488, ESPNL, espin like, [RH, Score=131, Expect=4e-31]} {Mouse: ENSMUSG00000049515, Espnl, espin-like, [RH, Score=129, Expect=1e-30]; ENSMUSG00000028943, Espn, espin, [RH, Score=125, Expect=2e-29]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=85.9, Expect=7e-17]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=92.4, Expect=5e-19]} {Smed: dd_Smed_v6_14434_0_1, dd_Smed_v6_14434_0_1, [RH, Score=112, Expect=8e-26]} {RNA1509_15655} {RNA1310_12610} {RNA815_27159.1}
10. MligTC455_09111 22 0.45 Mlig455_008786

Neo: -

Age: -

Regeneration-enriched R3: 7.523
Regeneration-enriched R4: 7.465
Regeneration-enriched R5: 6.106
Regeneration-enriched R2: 5.668

 1.68 - - - - 0.956 0.724 Mlig455_008786 {REF} {Length: 542} {NoTransDecoderORF} {RNA1509_11711} {RNA1310_125973} {RNA815_56213}
11. MligTC455_40590 202 4.21 Mlig455_030050

Neo: -

Age: Up-Down-Down

 1.672 - - - 0.713 - 0.959 Mlig455_030050 {REF} {Length: 3875} {NoTransDecoderORF} {RNA1509_25825} {RNA1310_58828.3} {RNA815_37716}
12. MligTC455_36085 165 3.44 Mlig455_043517, Mlig455_052478

Neo: -

Age: -

Region-enriched R2: 4.331/0.04635

 0.974 - - - - 0.974 -

Mlig455_043517 {REF} {Length: 3078} {NoTransDecoderORF} {RNA1509_43957} {RNA1310_14043} {RNA815_37878}

Mlig455_052478 {REF} {Length: 617} {NoTransDecoderORF} {RNA1509_43957} {RNA1310_64561} {RNA815_37878}
13. MligTC455_21792 120 2.5 Mlig455_019461, Mlig455_062164

Neo: -

Age: -

 0.972 - - - - 0.972 -

Mlig455_019461 {REF} {Length: 1989} {RNA1509_57867} {RNA1310_75051} {RNA815_43995.1}

Mlig455_062164 {REF} {Length: 1297} {RNA1509_57867} {RNA1310_23482} {RNA815_21848}
14. MligTC455_40668 165 3.45 Mlig455_016268

Neo: -

Age: -

 0.971 - - - - 0.971 - Mlig455_016268 {REF} {Length: 794} {RNA1509_47841} {RNA1310_11055} {RNA815_24189}
15. MligTC455_47783 422 8.78 Mlig455_031120

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.635

 0.971 - - - - - 0.971 Mlig455_031120 {REF} {Length: 2684} {Pfam: Mab-21 protein [PF03281.16, score=59.6]} {Smed: dd_Smed_v6_43442_0_1, dd_Smed_v6_43442_0_1, [RH, Score=63.2, Expect=1e-10]} {RNA1509_15607} {RNA1310_11311} {RNA815_5452}
16. MligTC455_52239 629 13.1 Mlig455_029233

Neo: -

Age: logFC(26M/2M)=-0.429

 ABCG2 0.969 - - - - - 0.969 Mlig455_029233 {REF} {Length: 3918} {Pfam: ABC-2 type transporter [PF01061.26, score=125.2]; ABC transporter [PF00005.29, score=73.3]; ABC-2 type transporter [PF19055.2, score=43.6]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=31.5]; RecF/RecN/SMC N terminal domain [PF02463.21, score=23.9]; AAA domain [PF13476.8, score=20.9]} {Human: ENSG00000118777, ABCG2, ATP binding cassette subfamily G member 2 (Junior blood group), [Score=541, Expect=0.0]} {Mouse: ENSMUSG00000029802, Abcg2, ATP binding cassette subfamily G member 2 (Junior blood group), [Score=546, Expect=0.0]} {Dmel: FBgn0003996, w, white, [Score=257, Expect=4e-74]} {Celegans: WBGene00012925, wht-8, WHiTe (Drosophila) related ABC transporter, [RH, Score=259, Expect=1e-75]} {Smed: dd_Smed_v6_4225_0_2, dd_Smed_v6_4225_0_2, [RH, Score=689, Expect=0.0]} {RNA1509_2851} {RNA1310_949.2} {RNA815_1895}
17. MligTC455_10246 210 4.37 Mlig455_004245, Mlig455_006260, Mlig455_047626, Mlig455_063989

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.568

 DUT 0.968 - - - - 0.968 -

Mlig455_004245 {REF} {Length: 706} {Pfam: dUTPase [PF00692.21, score=102.8]} {Human: ENSG00000128951, DUT, deoxyuridine triphosphatase, [Score=108, Expect=2e-30]} {Mouse: ENSMUSG00000027203, Dut, deoxyuridine triphosphatase, [Score=101, Expect=1e-27]} {Dmel: FBgn0250837, dUTPase, Deoxyuridine triphosphatase, [Score=93.6, Expect=2e-24]} {Celegans: WBGene00010609, dut-1, DeoxyUTPase; Deoxyuridinetriphosphatase, [Score=101, Expect=1e-25]} {Smed: dd_Smed_v6_2921_0_1, dd_Smed_v6_2921_0_1, [Score=107, Expect=2e-30]} {RNA1509_13675} {RNA1310_861.2} {RNA815_32869.2}

Mlig455_006260 {REF} {Length: 712} {TRANSSPLICED} {Pfam: dUTPase [PF00692.21, score=100.7]} {Human: ENSG00000128951, DUT, deoxyuridine triphosphatase, [Score=107, Expect=1e-29]} {Mouse: ENSMUSG00000027203, Dut, deoxyuridine triphosphatase, [Score=99.0, Expect=2e-26]} {Dmel: FBgn0250837, dUTPase, Deoxyuridine triphosphatase, [Score=92.4, Expect=5e-24]} {Celegans: WBGene00010609, dut-1, DeoxyUTPase; Deoxyuridinetriphosphatase, [Score=99.0, Expect=1e-24]} {Smed: dd_Smed_v6_2921_0_1, dd_Smed_v6_2921_0_1, [Score=107, Expect=2e-30]} {RNA1509_13675} {RNA1310_861.2} {RNA815_32869.2}

Mlig455_047626 {REF} {Length: 711} {TRANSSPLICED} {Pfam: dUTPase [PF00692.21, score=100.8]} {Human: ENSG00000128951, DUT, deoxyuridine triphosphatase, [Score=108, Expect=4e-30]} {Mouse: ENSMUSG00000027203, Dut, deoxyuridine triphosphatase, [Score=99.4, Expect=1e-26]} {Dmel: FBgn0250837, dUTPase, Deoxyuridine triphosphatase, [Score=93.6, Expect=2e-24]} {Celegans: WBGene00010609, dut-1, DeoxyUTPase; Deoxyuridinetriphosphatase, [Score=100, Expect=4e-25]} {Smed: dd_Smed_v6_2921_0_1, dd_Smed_v6_2921_0_1, [Score=107, Expect=2e-30]} {RNA1509_13675} {RNA1310_861.2} {RNA815_32869.2}

Mlig455_063989 {REF} {Length: 708} {TRANSSPLICED} {Pfam: dUTPase [PF00692.21, score=100.8]} {Human: ENSG00000128951, DUT, deoxyuridine triphosphatase, [Score=108, Expect=4e-30]} {Mouse: ENSMUSG00000027203, Dut, deoxyuridine triphosphatase, [Score=99.4, Expect=1e-26]} {Dmel: FBgn0250837, dUTPase, Deoxyuridine triphosphatase, [Score=93.6, Expect=2e-24]} {Celegans: WBGene00010609, dut-1, DeoxyUTPase; Deoxyuridinetriphosphatase, [Score=100, Expect=4e-25]} {Smed: dd_Smed_v6_2921_0_1, dd_Smed_v6_2921_0_1, [Score=107, Expect=2e-30]} {RNA1509_13675} {RNA1310_861.2} {RNA815_32869.2}
18. MligTC455_40591 172 3.59 Mlig455_030159

Neo: -

Age: -

 0.968 - - - - - 0.968 Mlig455_030159 {REF} {Length: 3255} {NoTransDecoderORF} {RNA1509_25825} {RNA1310_58828.3} {RNA815_37716}
19. MligTC455_30268 108 2.25 Mlig455_026672

Neo: -

Age: -

 0.967 - - - - 0.967 - Mlig455_026672 {REF} {Length: 4320} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=29.9]; Endonuclease-reverse transcriptase [PF14529.8, score=26.1]; PHD-finger [PF00628.31, score=24.9]} {RNA1509_5039} {RNA1310_554.1} {RNA815_3500.1}
20. MligTC455_22733 41 0.85 Mlig455_034409

Neo: -

Age: Down-Up-Down

 0.965 - - - - 0.965 - Mlig455_034409 {REF} {Length: 3449} {RNA1509_47691} {RNA1310_5733} {RNA815_5692.2}
21. MligTC455_26689 104 2.16 Mlig455_053175

Neo: -

Age: -

 PIF1 0.965 - - - - 0.965 - Mlig455_053175 {REF} {Length: 5153} {Pfam: PIF1-like helicase [PF05970.16, score=23.2]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=57.8, Expect=4e-08]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=73.6, Expect=2e-13]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=59.3, Expect=3e-09]} {RNA1509_56606} {RNA1310_6101.1} {RNA815_2733.1}
22. MligTC455_29069 229 4.78 Mlig455_017646, Mlig455_017647, Mlig455_024259

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=0.506

 0.963 - - 0.963 - - -

Mlig455_017646 {REF} {Length: 1950} {RNA1509_39229} {RNA1310_12556.2} {RNA815_5170.1}

Mlig455_017647 {REF} {Length: 3033} {RNA1509_54862} {RNA1310_63.1} {RNA815_5170.1}

Mlig455_024259 {REF} {Length: 1876} {RNA1509_39229} {RNA1310_12556.2} {RNA815_5170.1}
23. MligTC455_31275 557 11.61 Mlig455_031481, Mlig455_035102, Mlig455_035104

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.849

Region-enriched R7: 4.775/0.00000

 ANGPTL2 0.963 - - - - 0.963 -

Mlig455_031481 {REF} {Length: 3292} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=26.2]} {RNA1509_57205} {RNA1310_50931} {RNA815_9549.1}

Mlig455_035102 {REF} {Length: 1222} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=94.7]} {Human: ENSG00000136859, ANGPTL2, angiopoietin like 2, [Score=91.3, Expect=1e-19]; ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=89.4, Expect=4e-19]} {Mouse: ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=91.3, Expect=7e-20]; ENSMUSG00000038742, Angptl6, angiopoietin-like 6, [Score=87.0, Expect=2e-18]} {Dmel: FBgn0033312, CG8642, [Score=88.6, Expect=3e-19]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=65.5, Expect=1e-11]} {RNA1509_22524} {RNA1310_24989.1} {RNA815_9549.1}

Mlig455_035104 {REF} {Length: 1359} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=103.8]} {Human: ENSG00000136859, ANGPTL2, angiopoietin like 2, [Score=92.4, Expect=3e-20]; ENSG00000120332, TNN, tenascin N, [Score=90.5, Expect=2e-19]; ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=90.5, Expect=1e-19]; ENSG00000085265, FCN1, ficolin 1, [Score=87.8, Expect=4e-19]} {Mouse: ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=92.4, Expect=2e-20]; ENSMUSG00000026725, Tnn, tenascin N, [Score=90.1, Expect=2e-19]} {Dmel: FBgn0051832, CG31832, [Score=85.1, Expect=4e-19]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=63.2, Expect=6e-11]} {RNA1509_4879} {RNA1310_24989.1} {RNA815_9549.1}
24. MligTC455_36491 421 8.76 Mlig455_023802, Mlig455_030304, Mlig455_034629, Mlig455_050822

Neo: -

Age: -

 0.962 - - - - 0.962 -

Mlig455_023802 {REF} {Length: 944} {NoTransDecoderORF} {RNA1509_46050} {RNA1310_18890.3} {RNA815_24468}

Mlig455_030304 {REF} {Length: 878} {NoTransDecoderORF} {RNA1509_33973} {RNA1310_101860} {RNA815_62864}

Mlig455_034629 {REF} {Length: 1103} {NoTransDecoderORF} {RNA1509_52098} {RNA1310_24226} {RNA815_10062.1}

Mlig455_050822 {REF} {Length: 265} {NoTransDecoderORF} {RNA1509_33973} {RNA1310_317.1} {RNA815_24468}
25. MligTC455_08607 56 1.17 Mlig455_044643

Neo: -

Age: -

 B3GALT5 0.961 - - - - 0.961 - Mlig455_044643 {REF} {Length: 2468} {Pfam: Galactosyltransferase [PF01762.23, score=99.2]} {Human: ENSG00000183778, B3GALT5, beta-1,3-galactosyltransferase 5, [Score=90.1, Expect=9e-20]; ENSG00000237172, B3GNT9, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9, [Score=89.7, Expect=3e-19]; ENSG00000156966, B3GNT7, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7, [Score=89.0, Expect=5e-19]} {Mouse: ENSMUSG00000069920, B3gnt9, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9, [Score=87.4, Expect=1e-18]; ENSMUSG00000079445, B3gnt7, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7, [Score=87.0, Expect=2e-18]; ENSMUSG00000074892, B3galt5, UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5, [Score=86.3, Expect=1e-18]; ENSMUSG00000033849, B3galt2, UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2, [Score=83.2, Expect=3e-17]} {Dmel: FBgn0000221, brn, brainiac, [Score=100, Expect=1e-23]} {Celegans: WBGene00007104, B0024.15, Hexosyltransferase, [Score=66.6, Expect=4e-12]} {Smed: dd_Smed_v6_9789_0_1, dd_Smed_v6_9789_0_1, [Score=100, Expect=8e-24]} {RNA1509_9817} {RNA1310_37269} {RNA815_21699}
26. MligTC455_30272 339 7.06 Mlig455_003363, Mlig455_042254, Mlig455_062169

Neo: -

Age: Up-Up-Down

 0.961 - - - - 0.961 -

Mlig455_003363 {REF} {Length: 1628} {Celegans: WBGene00016348, C33E10.6, [RH, Score=272, Expect=9e-81]} {Smed: dd_Smed_v6_9974_1_7, dd_Smed_v6_9974_1_7, [Score=253, Expect=6e-77]} {RNA1509_5039} {RNA1310_3396.1} {RNA815_1342.1}

Mlig455_042254 {REF} {Length: 322} {Celegans: WBGene00022511, ZC53.4, [Score=69.3, Expect=5e-15]} {RNA1509_5039} {RNA1310_3396.1} {RNA815_1342.1}

Mlig455_062169 {REF} {Length: 1903} {Pfam: Recombination endonuclease VII [PF02945.17, score=32.1]} {Celegans: WBGene00022511, ZC53.4, [RH, Score=281, Expect=5e-83]} {Smed: dd_Smed_v6_9974_1_5, dd_Smed_v6_9974_1_5, [Score=262, Expect=1e-79]} {RNA1509_19771, RNA1509_5039} {RNA1310_3396.1, RNA1509_19771} {RNA1509_19771, RNA815_1342.1}
27. MligTC455_30263 126 2.62 Mlig455_003389

Neo: -

Age: -

 0.959 - - - - 0.959 - Mlig455_003389 {REF} {Length: 5048} {NoTransDecoderORF} {RNA1509_31144, RNA1509_45963} {RNA1310_27681, RNA1509_45963} {RNA1509_45963, RNA815_5159.1}
28. MligTC455_11497 60 1.24 Mlig455_038567

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_038567 {REF} {Length: 443} {NoTransDecoderORF} {RNA1509_51837} {RNA1310_23145} {RNA815_41033.2}
29. MligTC455_37902 24 0.5 Mlig455_065339

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_065339 {REF} {Length: 634} {NoTransDecoderORF} {RNA1509_47234} {RNA1310_28721} {RNA815_14343.1}
30. MligTC455_21357 46 0.95 Mlig455_026207

Neo: -

Age: logFC(26M/2M)=-0.524

 0.954 - - - - 0.954 - Mlig455_026207 {REF} {Length: 1175} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_57755} {RNA1310_5469} {RNA815_28835}
31. MligTC455_54343 138 2.87 Mlig455_045793

Neo: -

Age: Down-Up-Down

 CCDC74B 0.953 - - - - 0.953 - Mlig455_045793 {REF} {Length: 1939} {TRANSSPLICED} {Pfam: Coiled-coil domain of unknown function [PF14916.8, score=48.3]; Coiled coil protein 74, C terminal [PF14917.8, score=28.5]} {Human: ENSG00000152076, CCDC74B, coiled-coil domain containing 74B, [Score=48.1, Expect=8e-06]; ENSG00000163040, CCDC74A, coiled-coil domain containing 74A, [Score=48.1, Expect=9e-06]} {Mouse: ENSMUSG00000041617, Ccdc74a, coiled-coil domain containing 74A, [RH, Score=48.5, Expect=3e-07]} {RNA1509_40595} {RNA1310_26197} {RNA815_7738.1}
32. MligTC455_23117 272 5.68 Mlig455_001934, Mlig455_016856, Mlig455_035192, Mlig455_057244, Mlig455_065915, Mlig455_070017

Neo: -

Age: -

 B4GALT1 0.952 - - - - - 0.952

Mlig455_001934 {REF} {Length: 2391} {Pfam: Major surface glycoprotein [PF02349.17, score=23.1]} {RNA1509_15799} {RNA1310_79161} {RNA815_41132}

Mlig455_016856 {REF} {Length: 2368} {Pfam: N-terminal region of glycosyl transferase group 7 [PF13733.8, score=91.5]; N-terminal domain of galactosyltransferase [PF02709.16, score=60.4]} {Human: ENSG00000086062, B4GALT1, beta-1,4-galactosyltransferase 1, [Score=157, Expect=1e-43]} {Mouse: ENSMUSG00000028413, B4galt1, UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1, [Score=152, Expect=1e-41]} {Dmel: FBgn0039625, beta4GalNAcTB, [Score=140, Expect=5e-38]} {Celegans: WBGene00000269, bre-4, Beta-1,4-N-acetylgalactosaminyltransferase bre-4, [Score=132, Expect=1e-34]} {Smed: dd_Smed_v6_12436_0_1, dd_Smed_v6_12436_0_1, [Score=143, Expect=3e-39]} {RNA1509_15799} {RNA1310_1862} {RNA815_18283}

Mlig455_035192 {REF} {Length: 983} {NoTransDecoderORF} {RNA1509_15799} {RNA1310_139915} {RNA815_19515}

Mlig455_057244 {REF} {Length: 1208} {Pfam: Integrase core domain [PF00665.28, score=31.9]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=95.5, Expect=2e-22]} {RNA1509_15799} {RNA1310_1745} {RNA815_1718}

Mlig455_065915 {REF} {Length: 2187} {Pfam: N-terminal region of glycosyl transferase group 7 [PF13733.8, score=121.6]; N-terminal domain of galactosyltransferase [PF02709.16, score=60.3]} {Human: ENSG00000086062, B4GALT1, beta-1,4-galactosyltransferase 1, [Score=171, Expect=2e-48]} {Mouse: ENSMUSG00000028413, B4galt1, UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1, [Score=166, Expect=1e-46]} {Dmel: FBgn0039625, beta4GalNAcTB, [Score=154, Expect=3e-43]} {Celegans: WBGene00000269, bre-4, Beta-1,4-N-acetylgalactosaminyltransferase bre-4, [Score=149, Expect=6e-41]} {Smed: dd_Smed_v6_12436_0_1, dd_Smed_v6_12436_0_1, [Score=164, Expect=4e-47]} {RNA1509_15799} {RNA1310_1862} {RNA815_18283}

Mlig455_070017 {REF} {Length: 1620} {Pfam: N-terminal region of glycosyl transferase group 7 [PF13733.8, score=121.6]; N-terminal domain of galactosyltransferase [PF02709.16, score=60.3]} {Human: ENSG00000086062, B4GALT1, beta-1,4-galactosyltransferase 1, [Score=171, Expect=1e-48]} {Mouse: ENSMUSG00000028413, B4galt1, UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1, [Score=165, Expect=1e-46]} {Dmel: FBgn0039625, beta4GalNAcTB, [Score=154, Expect=3e-43]} {Celegans: WBGene00000269, bre-4, Beta-1,4-N-acetylgalactosaminyltransferase bre-4, [Score=149, Expect=7e-41]} {Smed: dd_Smed_v6_12436_0_1, dd_Smed_v6_12436_0_1, [Score=164, Expect=5e-47]} {RNA1509_15799} {RNA1310_1862} {RNA815_18283}
33. MligTC455_27069 73 1.53 Mlig455_069952

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_069952 {REF} {Length: 529} {RNA1509_59553} {RNA1310_127391} {RNA815_64986}
34. MligTC455_35294 1547 32.23 Mlig455_001167, Mlig455_001326, Mlig455_070580

Neo: -

Age: Down-Up-Up

Region-enriched R8: 1.741/0.00233
Region-enriched R2: 1.304/0.02383

 GRIA2, GRID1 0.952 - - - - - 0.952

Mlig455_001167 {REF} {Length: 3625} {Pfam: Ligand-gated ion channel [PF00060.28, score=89.8]; Universal stress protein family [PF00582.28, score=80.5]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=33.4]; Receptor family ligand binding region [PF01094.30, score=23.9]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=19.3]} {Human: ENSG00000182771, GRID1, glutamate ionotropic receptor delta type subunit 1, [Score=123, Expect=6e-28]; ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [Score=120, Expect=3e-27]; ENSG00000125675, GRIA3, glutamate ionotropic receptor AMPA type subunit 3, [Score=117, Expect=5e-26]} {Mouse: ENSMUSG00000033981, Gria2, glutamate receptor, ionotropic, AMPA2 (alpha 2), [Score=123, Expect=3e-28]; ENSMUSG00000041078, Grid1, glutamate receptor, ionotropic, delta 1, [Score=117, Expect=4e-26]} {Dmel: FBgn0038837, CG3822, [Score=124, Expect=9e-29]} {Celegans: WBGene00001615, glr-4, GLutamate Receptor family (AMPA), [Score=113, Expect=2e-25]} {Smed: dd_Smed_v6_31078_0_1, dd_Smed_v6_31078_0_1, [Score=220, Expect=2e-63]} {RNA1509_17988} {RNA1310_23557} {RNA815_11623.1}

Mlig455_001326 {REF} {Length: 3494} {Pfam: Ligand-gated ion channel [PF00060.28, score=92.1]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=33.4]; Receptor family ligand binding region [PF01094.30, score=23.1]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=19.8]} {Human: ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [Score=121, Expect=2e-27]; ENSG00000125675, GRIA3, glutamate ionotropic receptor AMPA type subunit 3, [Score=118, Expect=2e-26]} {Mouse: ENSMUSG00000033981, Gria2, glutamate receptor, ionotropic, AMPA2 (alpha 2), [Score=124, Expect=2e-28]} {Dmel: FBgn0038840, Grik, [Score=125, Expect=7e-29]} {Celegans: WBGene00001615, glr-4, GLutamate Receptor family (AMPA), [Score=114, Expect=1e-25]} {Smed: dd_Smed_v6_31078_0_1, dd_Smed_v6_31078_0_1, [Score=220, Expect=9e-64]} {RNA1509_17988} {RNA1310_23557} {RNA815_11623.1}

Mlig455_070580 {REF} {Length: 3686} {Pfam: Ligand-gated ion channel [PF00060.28, score=92.1]; Universal stress protein family [PF00582.28, score=80.3]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=33.4]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=33.2]; Receptor family ligand binding region [PF01094.30, score=22.8]} {Human: ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [Score=125, Expect=1e-28]; ENSG00000182771, GRID1, glutamate ionotropic receptor delta type subunit 1, [Score=122, Expect=1e-27]} {Mouse: ENSMUSG00000033981, Gria2, glutamate receptor, ionotropic, AMPA2 (alpha 2), [Score=128, Expect=1e-29]} {Dmel: FBgn0038837, CG3822, [Score=135, Expect=4e-32]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=119, Expect=4e-27]} {Smed: dd_Smed_v6_31078_0_1, dd_Smed_v6_31078_0_1, [Score=237, Expect=2e-69]} {RNA1509_17988} {RNA1310_23557} {RNA815_11623.1}
35. MligTC455_45905 70 1.47 Mlig455_059611

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_059611 {REF} {Length: 1864} {RNA1509_33398} {RNA1310_24396.1} {RNA815_21615}
36. MligTC455_48066 328 6.84 Mlig455_036125, Mlig455_036160

Neo: -

Age: -

Region-enriched R2: 2.674/0.01484

 0.951 - - - - 0.951 -

Mlig455_036125 {REF} {Length: 1205} {NoTransDecoderORF} {RNA1509_25368} {RNA1310_58162} {RNA815_17371}

Mlig455_036160 {REF} {Length: 2487} {TRANSSPLICED} {Pfam: Sulfotransferase domain [PF17784.3, score=204.5]; Sulfotransferase family [PF13469.8, score=22.2]} {Smed: dd_Smed_v6_5024_0_1, dd_Smed_v6_5024_0_1, [Score=168, Expect=2e-51]} {RNA1509_29042} {RNA1310_28759.2} {RNA815_17371}
37. MligTC455_26668 406 8.46 Mlig455_011365

Neo: -

Age: -

Regeneration-upregulated BL: 6.270

Regeneration-enriched BL: 6.270

 0.95 - - - - 0.950 - Mlig455_011365 {REF} {Length: 3699} {Pfam: Protein of unknown function (DUF1104) [PF06518.13, score=20.7]} {RNA1509_40399} {RNA1310_340.1} {RNA815_1857}
38. MligTC455_28066 54 1.13 Mlig455_046514

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_046514 {REF} {Length: 2208} {NoTransDecoderORF} {RNA1509_60018} {RNA1310_100111} {RNA815_22045}
39. MligTC455_30123 72 1.49 Mlig455_034831

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_034831 {REF} {Length: 2577} {TRANSSPLICED} {RNA1509_19670} {RNA1310_28603.1} {RNA815_23469.1}
40. MligTC455_37509 85 1.77 Mlig455_048299

Neo: -

Age: -

Region-enriched R2: 5.741/0.03019

 SALL4 0.95 - - - - 0.950 - Mlig455_048299 {REF} {Length: 1020} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=33.5]; C2H2-type zinc finger [PF13894.8, score=31.4]; Zinc-finger of C2H2 type [PF12874.9, score=30.1]; Zinc-finger double domain [PF13465.8, score=26.1]} {Human: ENSG00000101115, SALL4, spalt like transcription factor 4, [Score=80.9, Expect=6e-17]; ENSG00000256463, SALL3, spalt like transcription factor 3, [Score=79.0, Expect=3e-16]; ENSG00000277015, SALL3, spalt like transcription factor 3, [Score=79.0, Expect=3e-16]; ENSG00000263310, SALL3, spalt like transcription factor 3, [Score=78.6, Expect=4e-16]; ENSG00000103449, SALL1, spalt like transcription factor 1, [Score=78.2, Expect=7e-16]} {Mouse: ENSMUSG00000027547, Sall4, spalt like transcription factor 4, [Score=80.9, Expect=5e-17]; ENSMUSG00000024565, Sall3, spalt like transcription factor 3, [Score=79.0, Expect=2e-16]; ENSMUSG00000031665, Sall1, spalt like transcription factor 1, [Score=77.8, Expect=6e-16]} {Dmel: FBgn0261648, salm, spalt major, [Score=80.5, Expect=4e-17]} {Celegans: WBGene00004773, sem-4, SEM-4 long form, [Score=81.3, Expect=2e-17]} {Smed: dd_Smed_v6_14176_0_1, dd_Smed_v6_14176_0_1, [Score=94.7, Expect=3e-22]} {RNA1509_34185} {RNA1310_7579} {RNA815_11290}
41. MligTC455_43016 699 14.57 Mlig455_057375, Mlig455_057397, Mlig455_059560

Neo: -

Age: -

Region-enriched R8: 2.056/0.01340

 CFAP97D1 0.95 - - - - - 0.950

Mlig455_057375 {REF} {Length: 1827} {Pfam: Hemingway/CFA97 [PF13879.8, score=80.6]} {Human: ENSG00000231256, CFAP97D1, CFAP97 domain containing 1, [RH, Score=85.9, Expect=2e-20]} {Mouse: ENSMUSG00000090336, Cfap97d2, CFAP97 domain containing 2, [RH, Score=87.4, Expect=4e-21]; ENSMUSG00000010841, Cfap97d1, CFAP97 domain containing 1, [RH, Score=85.9, Expect=1e-20]} {Dmel: FBgn0039408, CG14551, [RH, Score=56.2, Expect=1e-09]} {Smed: dd_Smed_v6_2676_0_1, dd_Smed_v6_2676_0_1, [Score=190, Expect=7e-61]} {RNA1509_33407} {RNA1310_34014.1, RNA1509_33407} {RNA1509_33407, RNA815_18616}

Mlig455_057397 {REF} {Length: 1823} {Pfam: Hemingway/CFA97 [PF13879.8, score=80.6]} {Human: ENSG00000231256, CFAP97D1, CFAP97 domain containing 1, [RH, Score=85.9, Expect=2e-20]} {Mouse: ENSMUSG00000090336, Cfap97d2, CFAP97 domain containing 2, [RH, Score=87.4, Expect=4e-21]; ENSMUSG00000010841, Cfap97d1, CFAP97 domain containing 1, [RH, Score=85.9, Expect=1e-20]} {Dmel: FBgn0039408, CG14551, [RH, Score=56.2, Expect=1e-09]} {Smed: dd_Smed_v6_2676_0_1, dd_Smed_v6_2676_0_1, [Score=190, Expect=7e-61]} {RNA1509_33407} {RNA1310_34014.1} {RNA815_18616}

Mlig455_059560 {REF} {Length: 2107} {Pfam: Hemingway/CFA97 [PF13879.8, score=80.6]} {Human: ENSG00000231256, CFAP97D1, CFAP97 domain containing 1, [RH, Score=85.9, Expect=2e-20]} {Mouse: ENSMUSG00000090336, Cfap97d2, CFAP97 domain containing 2, [RH, Score=87.4, Expect=4e-21]; ENSMUSG00000010841, Cfap97d1, CFAP97 domain containing 1, [RH, Score=85.9, Expect=1e-20]} {Dmel: FBgn0039408, CG14551, [RH, Score=56.2, Expect=1e-09]} {Smed: dd_Smed_v6_2676_0_1, dd_Smed_v6_2676_0_1, [Score=190, Expect=7e-61]} {RNA1509_33407} {RNA1310_34014.1} {RNA815_18616}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA