TomoSeq data search

Data search

Results for MligTC455_27036

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_27036

833

17.36

Mlig455_008299, Mlig455_042963, Mlig455_048586, Mlig455_051917, Mlig455_059150, Mlig455_060138, Mlig455_067251

Neo: -

Age: -

Mlig455_008299 {REF} {Length: 2815} {NoTransDecoderORF} {RNA1509_6640} {RNA1310_811} {RNA815_207.1}

Mlig455_042963 {REF} {Length: 2378} {RNA1509_6640} {RNA1310_38395} {RNA815_207.1}

Mlig455_048586 {REF} {Length: 2430} {RNA1509_45658} {RNA1310_14625.1} {RNA815_19998}

Mlig455_051917 {REF} {Length: 2040} {Pfam: Replication protein A OB domain [PF16900.7, score=48.0]} {RNA1509_6640} {RNA1310_4236} {RNA815_207.1}

Mlig455_059150 {REF} {Length: 1272} {Pfam: Replication protein A OB domain [PF16900.7, score=49.4]} {RNA1509_6640} {RNA1310_4236} {RNA815_207.1}

Mlig455_060138 {REF} {Length: 2498} {RNA1509_6640} {RNA1310_38395} {RNA815_207.1}

Mlig455_067251 {REF} {Length: 203} {NoTransDecoderORF} {RNA1509_6640} {RNA1310_60233} {RNA815_207.1}

Cumulative graph for MligTC455_27036

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.274	4.384	0.82805	1.00000
RegionR2	1.231	4.384	0.04715	0.25744
RegionR3	0.156	4.384	0.76689	1.00000
RegionR4	0.194	4.384	0.75316	1.00000
RegionR5	-0.796	4.384	0.13860	0.38246
RegionR6	-0.553	4.384	0.34137	0.92861
RegionR7	-0.422	4.384	0.52421	1.00000
RegionR8	0.463	4.384	0.51154	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-3.43	4.384	0.19199	0.93062
RegenerationR2	-0.021	4.384	0.97069	1.00000
RegenerationR3	0.045	4.384	0.94483	1.00000
RegenerationR4	0.443	4.384	0.49945	0.86913
RegenerationR5	0.766	4.384	0.24385	0.67712
RegenerationR6	1.503	4.384	0.02234	0.18546
RegenerationBL	0.4	4.384	0.54826	0.90508
RegenerationTP	0.806	4.384	0.22591	0.67077

Genes with expression patterns similar to MligTC455_27036

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_27036	833	17.36	Mlig455_008299, Mlig455_042963, Mlig455_048586, Mlig455_051917, Mlig455_059150, Mlig455_060138, Mlig455_067251	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_008299 {REF} {Length: 2815} {NoTransDecoderORF} {RNA1509_6640} {RNA1310_811} {RNA815_207.1} Mlig455_042963 {REF} {Length: 2378} {RNA1509_6640} {RNA1310_38395} {RNA815_207.1} Mlig455_048586 {REF} {Length: 2430} {RNA1509_45658} {RNA1310_14625.1} {RNA815_19998} Mlig455_051917 {REF} {Length: 2040} {Pfam: Replication protein A OB domain [PF16900.7, score=48.0]} {RNA1509_6640} {RNA1310_4236} {RNA815_207.1} Mlig455_059150 {REF} {Length: 1272} {Pfam: Replication protein A OB domain [PF16900.7, score=49.4]} {RNA1509_6640} {RNA1310_4236} {RNA815_207.1} Mlig455_060138 {REF} {Length: 2498} {RNA1509_6640} {RNA1310_38395} {RNA815_207.1} Mlig455_067251 {REF} {Length: 203} {NoTransDecoderORF} {RNA1509_6640} {RNA1310_60233} {RNA815_207.1}
2.	MligTC455_27035	158	3.29	Mlig455_005901, Mlig455_063637	Neo: - Age: logFC(26M/2M)=0.334 Region-enriched R2: 2.799/0.04066		4.496	0.815	-	0.736	0.977	0.991	0.977	Mlig455_005901 {REF} {Length: 348} {NoTransDecoderORF} {RNA1509_6640} {RNA1310_60233} {RNA815_207.1} Mlig455_063637 {REF} {Length: 2011} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=56.4]; TcdA/TcdB catalytic glycosyltransferase domain [PF12919.9, score=19.8]} {Celegans: WBGene00021577, Y46B2A.2, [Score=72.4, Expect=3e-13]} {Smed: dd_Smed_v6_9783_0_1, dd_Smed_v6_9783_0_1, [Score=136, Expect=6e-36]} {RNA1509_24827} {RNA1310_24000} {RNA815_6273}
3.	MligTC455_27037	141	2.94	Mlig455_040567, Mlig455_062072	Neo: - Age: - Region-enriched R2: 4.338/0.00035		2.56	0.756	-	-	-	0.968	0.836	Mlig455_040567 {REF} {Length: 330} {NoTransDecoderORF} {RNA1509_6640} {RNA1310_37036} {RNA815_207.1} Mlig455_062072 {REF} {Length: 1678} {Pfam: Replication protein A OB domain [PF16900.7, score=48.4]} {RNA1509_6640} {RNA1310_589.2} {RNA815_207.1}
4.	MligTC455_50416	236	4.91	Mlig455_020155	Neo: - Age: logFC(26M/2M)=-0.515	ANK1	0.98	-	-	-	-	0.980	-	Mlig455_020155 {REF} {Length: 7072} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=370.4]; Ankyrin repeat [PF00023.32, score=241.0]; Ankyrin repeat [PF13606.8, score=233.7]; Ankyrin repeats (many copies) [PF13637.8, score=228.4]; Ankyrin repeats (many copies) [PF13857.8, score=209.7]; Mab-21 protein [PF03281.16, score=35.8]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=333, Expect=3e-92]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=322, Expect=4e-89]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=290, Expect=2e-78]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=288, Expect=5e-78]} {Smed: dd_Smed_v6_2072_0_29, dd_Smed_v6_2072_0_29, [Score=283, Expect=4e-80]} {RNA1509_34872} {RNA1310_938, RNA1509_34872} {RNA1509_34872, RNA815_1787.1}
5.	MligTC455_53182	2593	54.01	Mlig455_061866	Neo: - Age: Down-Down-Up	XIRP2	0.975	-	-	-	0.975	-	-	Mlig455_061866 {REF} {Length: 3831} {TRANSSPLICED} {Pfam: LIM domain [PF00412.24, score=43.3]} {Human: ENSG00000163092, XIRP2, xin actin binding repeat containing 2, [RH, Score=99.0, Expect=1e-20]} {Mouse: ENSMUSG00000027022, Xirp2, xin actin-binding repeat containing 2, [RH, Score=95.9, Expect=1e-19]} {Dmel: FBgn0063485, Lasp, [Score=57.0, Expect=6e-08]} {Smed: dd_Smed_v6_4138_0_1, dd_Smed_v6_4138_0_1, [Score=105, Expect=9e-25]} {RNA1509_6699} {RNA1310_12435} {RNA815_1836.1}
6.	MligTC455_46145	186	3.88	Mlig455_037570	Neo: - Age: logFC(26M/2M)=0.895		0.974	-	-	-	-	0.974	-	Mlig455_037570 {REF} {Length: 3501} {TRANSSPLICED} {RNA1509_46246} {RNA1310_41200} {RNA815_8606}
7.	MligTC455_53180	2599	54.15	Mlig455_010514	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.445	XIRP2	0.973	-	-	-	0.973	-	-	Mlig455_010514 {REF} {Length: 3954} {TRANSSPLICED} {Pfam: LIM domain [PF00412.24, score=43.3]} {Human: ENSG00000163092, XIRP2, xin actin binding repeat containing 2, [RH, Score=99.0, Expect=1e-20]} {Mouse: ENSMUSG00000027022, Xirp2, xin actin-binding repeat containing 2, [RH, Score=95.9, Expect=1e-19]} {Dmel: FBgn0063485, Lasp, [Score=57.0, Expect=6e-08]} {Smed: dd_Smed_v6_4138_0_1, dd_Smed_v6_4138_0_1, [Score=107, Expect=2e-25]} {RNA1509_6699} {RNA1310_12435} {RNA815_1836.1}
8.	MligTC455_53181	2612	54.42	Mlig455_061859	Neo: - Age: Down-Down-Up, logFC(26M/2M)=0.238	XIRP2	0.972	-	-	-	0.972	-	-	Mlig455_061859 {REF} {Length: 3582} {TRANSSPLICED} {Pfam: LIM domain [PF00412.24, score=43.4]} {Human: ENSG00000163092, XIRP2, xin actin binding repeat containing 2, [RH, Score=99.4, Expect=1e-20]} {Mouse: ENSMUSG00000027022, Xirp2, xin actin-binding repeat containing 2, [RH, Score=98.2, Expect=3e-20]} {Dmel: FBgn0063485, Lasp, [Score=57.4, Expect=4e-08]} {Smed: dd_Smed_v6_4138_0_1, dd_Smed_v6_4138_0_1, [Score=107, Expect=2e-25]} {RNA1509_6699} {RNA1310_12435} {RNA815_1836.1}
9.	MligTC455_30363	240	5	Mlig455_011101	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.846		0.961	-	-	-	0.961	-	-	Mlig455_011101 {REF} {Length: 2013} {NoTransDecoderORF} {RNA1509_33897} {RNA1310_18647} {RNA815_14645}
10.	MligTC455_25909	483	10.07	Mlig455_015480, Mlig455_040389	Neo: - Age: -		0.959	-	-	-	-	0.959	-	Mlig455_015480 {REF} {Length: 1023} {NoTransDecoderORF} {RNA1509_27251} {RNA1310_105013.1} {RNA815_14120.1} Mlig455_040389 {REF} {Length: 84} {NoTransDecoderORF} {RNA1509_27251} {RNA1310_26700} {RNA815_14120.1}
11.	MligTC455_53212	366	7.63	Mlig455_011462, Mlig455_011547	Neo: Irradiation Age: Up-Down-Down, logFC(26M/2M)=-0.277 Region-specific R4: 3.123 Region-enriched R4: 2.392/0.00134 Regeneration-upregulated R6: 2.996 Regeneration-enriched R6: 2.996	USP8	0.954	-	-	-	-	-	0.954	Mlig455_011462 {REF} {Length: 4001} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=230.0]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=50.2]; USP8 dimerisation domain [PF08969.13, score=36.7]} {Human: ENSG00000138592, USP8, ubiquitin specific peptidase 8, [Score=284, Expect=9e-82]} {Mouse: ENSMUSG00000027363, Usp8, ubiquitin specific peptidase 8, [Score=282, Expect=7e-81]} {Dmel: FBgn0038862, Usp8, Ubiquitin specific protease 8, [Score=215, Expect=2e-62]} {Celegans: WBGene00008441, usp-50, Ubiquitin Specific Protease, [Score=177, Expect=7e-46]} {Smed: dd_Smed_v6_6489_0_1, dd_Smed_v6_6489_0_1, [Score=311, Expect=2e-92]} {RNA1509_23876, RNA1509_57579} {RNA1310_7359, RNA1509_57579} {RNA1509_57579, RNA815_7370.1} Mlig455_011547 {REF} {Length: 3648} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=230.6]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=50.7]; USP8 dimerisation domain [PF08969.13, score=36.1]} {Human: ENSG00000138592, USP8, ubiquitin specific peptidase 8, [Score=282, Expect=5e-81]} {Mouse: ENSMUSG00000027363, Usp8, ubiquitin specific peptidase 8, [Score=280, Expect=4e-80]} {Dmel: FBgn0038862, Usp8, Ubiquitin specific protease 8, [Score=217, Expect=2e-63]} {Celegans: WBGene00008441, usp-50, Ubiquitin Specific Protease, [Score=176, Expect=1e-45]} {Smed: dd_Smed_v6_6489_0_1, dd_Smed_v6_6489_0_1, [Score=308, Expect=3e-91]} {RNA1509_23876} {RNA1310_7359, RNA1509_23876} {RNA1509_23876, RNA815_7370.1}
12.	MligTC455_46144	230	4.8	Mlig455_037529	Neo: - Age: logFC(26M/2M)=-0.234	PDS5A	0.952	-	-	-	-	0.952	-	Mlig455_037529 {REF} {Length: 7763} {TRANSSPLICED} {Pfam: FANCI solenoid 2 [PF14676.8, score=19.2]} {Human: ENSG00000121892, PDS5A, PDS5 cohesin associated factor A, [RH, Score=422, Expect=3e-123]; ENSG00000083642, PDS5B, PDS5 cohesin associated factor B, [RH, Score=421, Expect=2e-122]} {Mouse: ENSMUSG00000029202, Pds5a, PDS5 cohesin associated factor A, [RH, Score=426, Expect=1e-124]} {Dmel: FBgn0260012, pds5, precocious dissociation of sisters 5, [Score=339, Expect=7e-96]} {Smed: dd_Smed_v6_6701_1_3, dd_Smed_v6_6701_1_3, [Score=251, Expect=6e-67]} {RNA1509_7371} {RNA1310_1423.1} {RNA815_501}
13.	MligTC455_08444	39	0.81	Mlig455_067929	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_067929 {REF} {Length: 1240} {Pfam: Adenovirus endoprotease [PF00770.20, score=20.6]} {RNA1509_37388} {RNA1310_15837} {RNA815_24633}

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