Data search


search
Exact
Search

Results for MligTC455_27425

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_27425 187 3.89 Mlig455_047152

Neo: -

Age: logFC(26M/2M)=0.348

Region-enriched R5: 2.140/0.00643

CTDSP1 Mlig455_047152 {REF} {Length: 5508} {Pfam: NLI interacting factor-like phosphatase [PF03031.20, score=152.4]} {Human: ENSG00000144579, CTDSP1, CTD small phosphatase 1, [RH, Score=232, Expect=1e-73]; ENSG00000144677, CTDSPL, CTD small phosphatase like, [RH, Score=228, Expect=1e-71]; ENSG00000175215, CTDSP2, CTD small phosphatase 2, [RH, Score=222, Expect=1e-69]} {Mouse: ENSMUSG00000026176, Ctdsp1, CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1, [RH, Score=232, Expect=1e-73]; ENSMUSG00000047409, Ctdspl, CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like, [RH, Score=229, Expect=3e-72]; ENSMUSG00000078429, Ctdsp2, CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2, [RH, Score=224, Expect=1e-70]} {Dmel: FBgn0036556, CG5830, [RH, Score=221, Expect=8e-69]} {Celegans: WBGene00007054, scpl-1, CTD small phosphatase-like protein 1, [RH, Score=223, Expect=2e-67]} {Smed: dd_Smed_v6_8196_0_1, dd_Smed_v6_8196_0_1, [RH, Score=245, Expect=4e-74]} {RNA1509_41690} {RNA1310_6011.1} {RNA815_20170.1}

Cumulative graph for MligTC455_27425

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.5 2.654 0.76151 1.00000
RegionR2 0.59 2.654 0.48205 0.86572
RegionR3 1.129 2.654 0.14144 0.64213
RegionR4 2.321 2.654 0.00832 0.05314
RegionR5 2.14 2.654 0.00056 0.00643
RegionR6 0.197 2.654 0.69914 1.00000
RegionR7 -1.248 2.654 0.99050 1.00000
RegionR8 -5.628 2.654 0.05353 0.45075

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -4.826 2.654 0.45728 1.00000
RegenerationR2 -0.107 2.654 0.81358 0.99392
RegenerationR3 -0.722 2.654 0.19513 0.63059
RegenerationR4 -1.227 2.654 0.04921 0.35779
RegenerationR5 -1.017 2.654 0.03307 0.30314
RegenerationR6 0.604 2.654 0.34273 0.68828
RegenerationBL 2.953 2.654 0.02050 0.15517
RegenerationTP 2.784 2.654 0.15995 0.58814


Genes with expression patterns similar to MligTC455_27425

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_27425 187 3.89 Mlig455_047152

Neo: -

Age: logFC(26M/2M)=0.348

Region-enriched R5: 2.140/0.00643

CTDSP1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_047152 {REF} {Length: 5508} {Pfam: NLI interacting factor-like phosphatase [PF03031.20, score=152.4]} {Human: ENSG00000144579, CTDSP1, CTD small phosphatase 1, [RH, Score=232, Expect=1e-73]; ENSG00000144677, CTDSPL, CTD small phosphatase like, [RH, Score=228, Expect=1e-71]; ENSG00000175215, CTDSP2, CTD small phosphatase 2, [RH, Score=222, Expect=1e-69]} {Mouse: ENSMUSG00000026176, Ctdsp1, CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1, [RH, Score=232, Expect=1e-73]; ENSMUSG00000047409, Ctdspl, CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like, [RH, Score=229, Expect=3e-72]; ENSMUSG00000078429, Ctdsp2, CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2, [RH, Score=224, Expect=1e-70]} {Dmel: FBgn0036556, CG5830, [RH, Score=221, Expect=8e-69]} {Celegans: WBGene00007054, scpl-1, CTD small phosphatase-like protein 1, [RH, Score=223, Expect=2e-67]} {Smed: dd_Smed_v6_8196_0_1, dd_Smed_v6_8196_0_1, [RH, Score=245, Expect=4e-74]} {RNA1509_41690} {RNA1310_6011.1} {RNA815_20170.1}
2. MligTC455_50202 378 7.87 Mlig455_040081

Neo: -

Age: -

0.972 - - - - - 0.972 Mlig455_040081 {REF} {Length: 5393} {TRANSSPLICED} {Pfam: MyTH4 domain [PF00784.19, score=60.8]} {Mouse: ENSMUSG00000022272, Myo10, myosin X, [Score=53.5, Expect=1e-06]} {Smed: dd_Smed_v6_19214_0_1, dd_Smed_v6_19214_0_1, [RH, Score=182, Expect=6e-49]} {RNA1509_21521, RNA1509_38698} {RNA1310_14460, RNA1509_21521, RNA1509_38698} {RNA1509_21521, RNA1509_38698, RNA815_19524}
3. MligTC455_37621 347 7.24 Mlig455_002946

Neo: -

Age: -

Region-enriched R2: 1.688/0.02767

0.969 - - - - - 0.969 Mlig455_002946 {REF} {Length: 5004} {TRANSSPLICED} {RNA1509_29019} {RNA1310_10393, RNA1509_29019} {RNA1509_29019, RNA815_13826}
4. MligTC455_17513 513 10.68 Mlig455_044710

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.371

0.964 - - - - - 0.964 Mlig455_044710 {REF} {Length: 1090} {RNA1509_54502} {RNA1310_19892.1} {RNA815_10608}
5. MligTC455_47578 1101 22.94 Mlig455_032916

Neo: -

Age: Down-Down-Up

0.964 - - - - 0.964 - Mlig455_032916 {REF} {Length: 2168} {TRANSSPLICED} {RNA1509_36784, RNA1509_43500, RNA1509_56493} {RNA1310_37626, RNA1509_36784, RNA1509_43500, RNA1509_56493} {RNA1509_36784, RNA1509_43500, RNA1509_56493, RNA815_15592}
6. MligTC455_31751 390 8.12 Mlig455_020399

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.428

PCCA 0.958 - - - - 0.958 - Mlig455_020399 {REF} {Length: 4079} {TRANSSPLICED} {Pfam: Carbamoyl-phosphate synthase L chain, ATP binding domain [PF02786.19, score=273.4]; Biotin carboxylase, N-terminal domain [PF00289.24, score=146.4]; Biotin carboxylase C-terminal domain [PF02785.21, score=118.5]; Propionyl-coenzyme A carboxylase BT domain [PF18140.3, score=67.3]; Biotin-requiring enzyme [PF00364.24, score=57.8]; Biotin-lipoyl like [PF13533.8, score=37.5]; D-ala D-ala ligase C-terminus [PF07478.15, score=33.8]; ATP-grasp domain [PF02222.24, score=30.0]; RimK-like ATP-grasp domain [PF08443.13, score=23.8]; ATP-grasp domain [PF02655.16, score=21.2]} {Human: ENSG00000175198, PCCA, propionyl-CoA carboxylase subunit alpha, [RH, Score=848, Expect=0.0]} {Mouse: ENSMUSG00000041650, Pcca, propionyl-Coenzyme A carboxylase, alpha polypeptide, [RH, Score=864, Expect=0.0]} {Dmel: FBgn0039877, CG2118, [Score=454, Expect=2e-150]} {Celegans: WBGene00017864, pcca-1, Propionyl-CoA carboxylase alpha chain, mitochondrial, [RH, Score=826, Expect=0.0]} {Smed: dd_Smed_v6_1247_0_1, dd_Smed_v6_1247_0_1, [RH, Score=1031, Expect=0.0]} {RNA1509_275} {RNA1310_9293.1} {RNA815_1830.1}
7. MligTC455_22246 280 5.83 Mlig455_006222

Neo: Int S/G2/M

Age: -

0.954 - - - - 0.954 - Mlig455_006222 {REF} {Length: 4493} {TRANSSPLICED} {RNA1509_10544, RNA1509_11263, RNA1509_47787, RNA1509_58495} {RNA1310_24272, RNA1509_10544, RNA1509_11263, RNA1509_47787, RNA1509_58495} {RNA1509_10544, RNA1509_11263, RNA1509_47787, RNA1509_58495, RNA815_8333}
8. MligTC455_15784 370 7.7 Mlig455_029287

Neo: -

Age: -

0.952 - - - - - 0.952 Mlig455_029287 {REF} {Length: 1928} {Pfam: TIR domain [PF13676.8, score=46.2]} {Smed: dd_Smed_v6_13404_0_1, dd_Smed_v6_13404_0_1, [Score=112, Expect=2e-26]} {RNA1509_41551} {RNA1310_16315, RNA1509_41551} {RNA1509_41551, RNA815_7731}
9. MligTC455_41819 4493 93.61 Mlig455_019994

Neo: -

Age: -

NDUFA10 0.951 - - - - 0.951 - Mlig455_019994 {REF} {Length: 2118} {Pfam: Deoxynucleoside kinase [PF01712.21, score=81.5]} {Human: ENSG00000281434, NDUFA10, NADH:ubiquinone oxidoreductase subunit A10, [RH, Score=95.5, Expect=4e-21]; ENSG00000130414, NDUFA10, NADH:ubiquinone oxidoreductase subunit A10, [RH, Score=95.5, Expect=4e-21]} {Mouse: ENSMUSG00000026260, Ndufa10, NADH:ubiquinone oxidoreductase subunit A10, [RH, Score=89.0, Expect=4e-19]} {Dmel: FBgn0019957, ND-42, NADH dehydrogenase (ubiquinone) 42 kDa subunit, [RH, Score=120, Expect=4e-30]} {Celegans: WBGene00019401, nuo-4, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial, [RH, Score=104, Expect=2e-24]} {Smed: dd_Smed_v6_5279_0_1, dd_Smed_v6_5279_0_1, [RH, Score=175, Expect=2e-50]} {RNA1509_1325} {RNA1310_14617} {RNA815_5337}
10. MligTC455_36332 4005 83.44 Mlig455_035242, Mlig455_035287

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.355

PIM1 0.95 - - - - - 0.950

Mlig455_035242 {REF} {Length: 2797} {Pfam: Protein kinase domain [PF00069.27, score=193.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=74.5]; Kinase-like [PF14531.8, score=19.8]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=18.7]} {Human: ENSG00000137193, PIM1, Pim-1 proto-oncogene, serine/threonine kinase, [RH, Score=296, Expect=6e-98]} {Mouse: ENSMUSG00000024014, Pim1, proviral integration site 1, [RH, Score=296, Expect=4e-98]} {Dmel: FBgn0034950, Pask, PAS kinase, [Score=136, Expect=2e-34]} {Celegans: WBGene00004183, prk-2, Serine/threonine-protein kinase prk-2, [RH, Score=228, Expect=2e-70]} {Smed: dd_Smed_v6_4012_0_1, dd_Smed_v6_4012_0_1, [RH, Score=283, Expect=3e-92]} {RNA1509_4124} {RNA1310_8145, RNA1509_4124} {RNA1509_4124, RNA815_2413}

Mlig455_035287 {REF} {Length: 2796} {Pfam: Protein kinase domain [PF00069.27, score=193.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=74.5]; Kinase-like [PF14531.8, score=19.8]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=18.7]} {Human: ENSG00000137193, PIM1, Pim-1 proto-oncogene, serine/threonine kinase, [RH, Score=296, Expect=7e-98]} {Mouse: ENSMUSG00000024014, Pim1, proviral integration site 1, [RH, Score=296, Expect=5e-98]} {Dmel: FBgn0034950, Pask, PAS kinase, [Score=136, Expect=2e-34]} {Celegans: WBGene00004183, prk-2, Serine/threonine-protein kinase prk-2, [RH, Score=226, Expect=1e-69]} {Smed: dd_Smed_v6_4012_0_1, dd_Smed_v6_4012_0_1, [RH, Score=283, Expect=3e-92]} {RNA1509_4124, RNA1509_53578} {RNA1310_8145, RNA1509_53578} {RNA1509_53578, RNA815_2413}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA