TomoSeq data search

Data search

Results for MligTC455_47578

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_47578

1101

22.94

Mlig455_032916

Neo: -

Age: Down-Down-Up

Mlig455_032916 {REF} {Length: 2168} {TRANSSPLICED} {RNA1509_36784, RNA1509_43500, RNA1509_56493} {RNA1310_37626, RNA1509_36784, RNA1509_43500, RNA1509_56493} {RNA1509_36784, RNA1509_43500, RNA1509_56493, RNA815_15592}

Cumulative graph for MligTC455_47578

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.5	4.801	0.58108	1.00000
RegionR2	-0.653	4.801	0.10530	0.39986
RegionR3	0.118	4.801	0.70863	1.00000
RegionR4	0.306	4.801	0.42089	0.74910
RegionR5	0.681	4.801	0.01625	0.08314
RegionR6	0.444	4.801	0.15420	0.70043
RegionR7	-0.024	4.801	0.95267	1.00000
RegionR8	-0.371	4.801	0.48772	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-7.853	4.801	0.03119	0.63255
RegenerationR2	0.09	4.801	0.79060	0.98675
RegenerationR3	-0.215	4.801	0.54158	0.87870
RegenerationR4	-0.169	4.801	0.64860	0.93263
RegenerationR5	-0.263	4.801	0.42577	0.81500
RegenerationR6	-0.51	4.801	0.14816	0.47165
RegenerationBL	0.195	4.801	0.61555	0.95947
RegenerationTP	-0.91	4.801	0.07570	0.44043

Genes with expression patterns similar to MligTC455_47578

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_47578	1101	22.94	Mlig455_032916	Neo: - Age: Down-Down-Up		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_032916 {REF} {Length: 2168} {TRANSSPLICED} {RNA1509_36784, RNA1509_43500, RNA1509_56493} {RNA1310_37626, RNA1509_36784, RNA1509_43500, RNA1509_56493} {RNA1509_36784, RNA1509_43500, RNA1509_56493, RNA815_15592}
2.	MligTC455_44182	5080	105.83	Mlig455_052125, Mlig455_054123	Neo: - Age: - Regeneration-downregulated BL: -1.159 Regeneration-depleted BL: -1.159	RAB5B	2.415	0.727	-	-	0.951	-	0.737	Mlig455_052125 {REF} {Length: 3077} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=199.2]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=120.1]; ADP-ribosylation factor family [PF00025.23, score=49.2]; 50S ribosome-binding GTPase [PF01926.25, score=25.3]; Gtr1/RagA G protein conserved region [PF04670.14, score=22.2]; RsgA GTPase [PF03193.18, score=22.0]} {Human: ENSG00000111540, RAB5B, RAB5B, member RAS oncogene family, [RH, Score=276, Expect=2e-94]; ENSG00000108774, RAB5C, RAB5C, member RAS oncogene family, [RH, Score=274, Expect=3e-93]; ENSG00000144566, RAB5A, RAB5A, member RAS oncogene family, [RH, Score=272, Expect=4e-93]} {Mouse: ENSMUSG00000000711, Rab5b, RAB5B, member RAS oncogene family, [RH, Score=276, Expect=1e-94]; ENSMUSG00000019173, Rab5c, RAB5C, member RAS oncogene family, [RH, Score=273, Expect=2e-93]; ENSMUSG00000017831, Rab5a, RAB5A, member RAS oncogene family, [RH, Score=272, Expect=3e-93]} {Dmel: FBgn0014010, Rab5, [RH, Score=271, Expect=5e-93]} {Celegans: WBGene00004268, rab-5, RAB family, [RH, Score=265, Expect=7e-91]} {Smed: dd_Smed_v6_796_0_1, dd_Smed_v6_796_0_1, [RH, Score=276, Expect=3e-95]} {RNA1509_11276, RNA1509_29926, RNA1509_4956} {RNA1310_20168.2, RNA1509_11276, RNA1509_29926, RNA1509_4956} {RNA1509_11276, RNA1509_29926, RNA1509_4956, RNA815_13866} Mlig455_054123 {REF} {Length: 2395} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=199.2]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=120.1]; ADP-ribosylation factor family [PF00025.23, score=49.2]; 50S ribosome-binding GTPase [PF01926.25, score=25.3]; Gtr1/RagA G protein conserved region [PF04670.14, score=22.2]; RsgA GTPase [PF03193.18, score=22.0]} {Human: ENSG00000111540, RAB5B, RAB5B, member RAS oncogene family, [RH, Score=276, Expect=2e-94]; ENSG00000108774, RAB5C, RAB5C, member RAS oncogene family, [RH, Score=274, Expect=3e-93]; ENSG00000144566, RAB5A, RAB5A, member RAS oncogene family, [RH, Score=272, Expect=4e-93]} {Mouse: ENSMUSG00000000711, Rab5b, RAB5B, member RAS oncogene family, [RH, Score=276, Expect=1e-94]; ENSMUSG00000019173, Rab5c, RAB5C, member RAS oncogene family, [RH, Score=273, Expect=2e-93]; ENSMUSG00000017831, Rab5a, RAB5A, member RAS oncogene family, [RH, Score=272, Expect=3e-93]} {Dmel: FBgn0014010, Rab5, [RH, Score=271, Expect=5e-93]} {Celegans: WBGene00004268, rab-5, RAB family, [RH, Score=265, Expect=7e-91]} {Smed: dd_Smed_v6_796_0_1, dd_Smed_v6_796_0_1, [RH, Score=276, Expect=3e-95]} {RNA1509_15436, RNA1509_26235, RNA1509_38165, RNA1509_4956} {RNA1310_20168.2, RNA1509_15436, RNA1509_26235, RNA1509_38165} {RNA1509_15436, RNA1509_26235, RNA1509_38165, RNA815_13866}
3.	MligTC455_41819	4493	93.61	Mlig455_019994	Neo: - Age: -	NDUFA10	1.731	-	-	-	-	0.966	0.765	Mlig455_019994 {REF} {Length: 2118} {Pfam: Deoxynucleoside kinase [PF01712.21, score=81.5]} {Human: ENSG00000281434, NDUFA10, NADH:ubiquinone oxidoreductase subunit A10, [RH, Score=95.5, Expect=4e-21]; ENSG00000130414, NDUFA10, NADH:ubiquinone oxidoreductase subunit A10, [RH, Score=95.5, Expect=4e-21]} {Mouse: ENSMUSG00000026260, Ndufa10, NADH:ubiquinone oxidoreductase subunit A10, [RH, Score=89.0, Expect=4e-19]} {Dmel: FBgn0019957, ND-42, NADH dehydrogenase (ubiquinone) 42 kDa subunit, [RH, Score=120, Expect=4e-30]} {Celegans: WBGene00019401, nuo-4, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial, [RH, Score=104, Expect=2e-24]} {Smed: dd_Smed_v6_5279_0_1, dd_Smed_v6_5279_0_1, [RH, Score=175, Expect=2e-50]} {RNA1509_1325} {RNA1310_14617} {RNA815_5337}
4.	MligTC455_27425	187	3.89	Mlig455_047152	Neo: - Age: logFC(26M/2M)=0.348 Region-enriched R5: 2.140/0.00643	CTDSP1	0.964	-	-	-	-	0.964	-	Mlig455_047152 {REF} {Length: 5508} {Pfam: NLI interacting factor-like phosphatase [PF03031.20, score=152.4]} {Human: ENSG00000144579, CTDSP1, CTD small phosphatase 1, [RH, Score=232, Expect=1e-73]; ENSG00000144677, CTDSPL, CTD small phosphatase like, [RH, Score=228, Expect=1e-71]; ENSG00000175215, CTDSP2, CTD small phosphatase 2, [RH, Score=222, Expect=1e-69]} {Mouse: ENSMUSG00000026176, Ctdsp1, CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1, [RH, Score=232, Expect=1e-73]; ENSMUSG00000047409, Ctdspl, CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like, [RH, Score=229, Expect=3e-72]; ENSMUSG00000078429, Ctdsp2, CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2, [RH, Score=224, Expect=1e-70]} {Dmel: FBgn0036556, CG5830, [RH, Score=221, Expect=8e-69]} {Celegans: WBGene00007054, scpl-1, CTD small phosphatase-like protein 1, [RH, Score=223, Expect=2e-67]} {Smed: dd_Smed_v6_8196_0_1, dd_Smed_v6_8196_0_1, [RH, Score=245, Expect=4e-74]} {RNA1509_41690} {RNA1310_6011.1} {RNA815_20170.1}
5.	MligTC455_31751	390	8.12	Mlig455_020399	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.428	PCCA	0.95	-	-	-	-	0.950	-	Mlig455_020399 {REF} {Length: 4079} {TRANSSPLICED} {Pfam: Carbamoyl-phosphate synthase L chain, ATP binding domain [PF02786.19, score=273.4]; Biotin carboxylase, N-terminal domain [PF00289.24, score=146.4]; Biotin carboxylase C-terminal domain [PF02785.21, score=118.5]; Propionyl-coenzyme A carboxylase BT domain [PF18140.3, score=67.3]; Biotin-requiring enzyme [PF00364.24, score=57.8]; Biotin-lipoyl like [PF13533.8, score=37.5]; D-ala D-ala ligase C-terminus [PF07478.15, score=33.8]; ATP-grasp domain [PF02222.24, score=30.0]; RimK-like ATP-grasp domain [PF08443.13, score=23.8]; ATP-grasp domain [PF02655.16, score=21.2]} {Human: ENSG00000175198, PCCA, propionyl-CoA carboxylase subunit alpha, [RH, Score=848, Expect=0.0]} {Mouse: ENSMUSG00000041650, Pcca, propionyl-Coenzyme A carboxylase, alpha polypeptide, [RH, Score=864, Expect=0.0]} {Dmel: FBgn0039877, CG2118, [Score=454, Expect=2e-150]} {Celegans: WBGene00017864, pcca-1, Propionyl-CoA carboxylase alpha chain, mitochondrial, [RH, Score=826, Expect=0.0]} {Smed: dd_Smed_v6_1247_0_1, dd_Smed_v6_1247_0_1, [RH, Score=1031, Expect=0.0]} {RNA1509_275} {RNA1310_9293.1} {RNA815_1830.1}

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