TomoSeq data search

Data search

Results for MligTC455_27687

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_27687

322

6.71

Mlig455_070624

Neo: Irradiation

Age: -

ZFP62

Mlig455_070624 {REF} {Length: 6382} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=89.8]; Zinc-finger double domain [PF13465.8, score=82.9]; Zinc finger, C2H2 type [PF00096.28, score=66.6]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=23.7]} {Human: ENSG00000196670, ZFP62, ZFP62 zinc finger protein, [Score=153, Expect=5e-37]; ENSG00000167380, ZNF226, zinc finger protein 226, [Score=153, Expect=3e-37]; ENSG00000272602, ZNF595, zinc finger protein 595, [Score=152, Expect=1e-38]; ENSG00000196867, ZFP28, ZFP28 zinc finger protein, [Score=150, Expect=4e-36]; ENSG00000197961, ZNF121, zinc finger protein 121, [Score=149, Expect=3e-38]; ENSG00000283201, AC092329.3, novel protein, [Score=147, Expect=1e-36]} {Mouse: ENSMUSG00000063108, Zfp26, zinc finger protein 26, [Score=154, Expect=2e-37]; ENSMUSG00000049321, Zfp2, zinc finger protein 2, [Score=149, Expect=2e-37]; ENSMUSG00000046311, Zfp62, zinc finger protein 62, [Score=147, Expect=3e-35]; ENSMUSG00000062861, Zfp28, zinc finger protein 28, [Score=147, Expect=2e-35]} {Dmel: FBgn0020309, crol, crooked legs, [Score=127, Expect=2e-29]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [Score=84.7, Expect=4e-17]} {Smed: dd_Smed_v6_5058_0_1, dd_Smed_v6_5058_0_1, [RH, Score=830, Expect=0.0]} {RNA1509_1385, RNA1509_19208} {RNA1310_615.1, RNA1509_19208} {RNA1509_19208, RNA815_756}

Cumulative graph for MligTC455_27687

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	1.55	3.154	0.27990	0.93089
RegionR2	0.303	3.154	0.69246	1.00000
RegionR3	-1.213	3.154	0.09351	0.53829
RegionR4	-0.294	3.154	0.69502	0.98535
RegionR5	0.493	3.154	0.36743	0.72009
RegionR6	0.12	3.154	0.84879	1.00000
RegionR7	0.058	3.154	0.94436	1.00000
RegionR8	-1.016	3.154	0.45076	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-7.156	3.154	0.10169	0.81947
RegenerationR2	-0.037	3.154	0.95216	1.00000
RegenerationR3	1.566	3.154	0.04051	0.35343
RegenerationR4	0.913	3.154	0.18918	0.63307
RegenerationR5	0.832	3.154	0.18254	0.61256
RegenerationR6	1.134	3.154	0.09618	0.38566
RegenerationBL	1.861	3.154	0.01655	0.13654
RegenerationTP	0.534	3.154	0.60863	0.96611

Genes with expression patterns similar to MligTC455_27687

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_27687	322	6.71	Mlig455_070624	Neo: Irradiation Age: -	ZFP62	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_070624 {REF} {Length: 6382} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=89.8]; Zinc-finger double domain [PF13465.8, score=82.9]; Zinc finger, C2H2 type [PF00096.28, score=66.6]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=23.7]} {Human: ENSG00000196670, ZFP62, ZFP62 zinc finger protein, [Score=153, Expect=5e-37]; ENSG00000167380, ZNF226, zinc finger protein 226, [Score=153, Expect=3e-37]; ENSG00000272602, ZNF595, zinc finger protein 595, [Score=152, Expect=1e-38]; ENSG00000196867, ZFP28, ZFP28 zinc finger protein, [Score=150, Expect=4e-36]; ENSG00000197961, ZNF121, zinc finger protein 121, [Score=149, Expect=3e-38]; ENSG00000283201, AC092329.3, novel protein, [Score=147, Expect=1e-36]} {Mouse: ENSMUSG00000063108, Zfp26, zinc finger protein 26, [Score=154, Expect=2e-37]; ENSMUSG00000049321, Zfp2, zinc finger protein 2, [Score=149, Expect=2e-37]; ENSMUSG00000046311, Zfp62, zinc finger protein 62, [Score=147, Expect=3e-35]; ENSMUSG00000062861, Zfp28, zinc finger protein 28, [Score=147, Expect=2e-35]} {Dmel: FBgn0020309, crol, crooked legs, [Score=127, Expect=2e-29]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [Score=84.7, Expect=4e-17]} {Smed: dd_Smed_v6_5058_0_1, dd_Smed_v6_5058_0_1, [RH, Score=830, Expect=0.0]} {RNA1509_1385, RNA1509_19208} {RNA1310_615.1, RNA1509_19208} {RNA1509_19208, RNA815_756}
2.	MligTC455_45643	71	1.47	Mlig455_034710	Neo: - Age: -	MYNN	0.976	-	-	-	0.976	-	-	Mlig455_034710 {REF} {Length: 1929} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=50.7]; C2H2-type zinc finger [PF13894.8, score=44.8]; Zinc-finger double domain [PF13465.8, score=28.9]; C2H2-type zinc finger [PF13912.8, score=27.4]; C2H2-type zinc ribbon [PF15909.7, score=24.3]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=20.9]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=19.5]} {Human: ENSG00000085274, MYNN, myoneurin, [Score=83.2, Expect=1e-17]; ENSG00000213988, ZNF90, zinc finger protein 90, [Score=79.3, Expect=2e-16]} {Mouse: ENSMUSG00000091183, Gm5141, predicted gene 5141, [Score=82.8, Expect=1e-17]; ENSMUSG00000037730, Mynn, myoneurin, [Score=82.4, Expect=1e-17]; ENSMUSG00000074867, Zfp808, zinc finger protein 808, [Score=80.1, Expect=8e-17]} {Dmel: FBgn0005642, wdn, wings down, [Score=73.9, Expect=7e-15]} {Celegans: WBGene00012385, Y5F2A.4, [Score=65.1, Expect=4e-12]} {Smed: dd_Smed_v6_19859_0_1, dd_Smed_v6_19859_0_1, [Score=62.4, Expect=3e-11]} {RNA1509_15772} {RNA1310_17539} {RNA815_4812}
3.	MligTC455_41444	445	9.26	Mlig455_001547	Neo: Irradiation Age: Up-Up-Down	TRIM3	0.972	-	-	-	0.972	-	-	Mlig455_001547 {REF} {Length: 5402} {Pfam: NHL repeat [PF01436.23, score=78.7]; B-box zinc finger [PF00643.26, score=43.4]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=123, Expect=3e-28]} {Mouse: ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=122, Expect=4e-28]} {Dmel: FBgn0026206, mei-P26, meiotic P26, [RH, Score=459, Expect=1e-144]} {Celegans: WBGene00003559, ncl-1, B-box type zinc finger protein ncl-1, [Score=223, Expect=3e-61]} {Smed: dd_Smed_v6_6250_0_1, dd_Smed_v6_6250_0_1, [RH, Score=556, Expect=0.0]} {RNA1509_4482} {RNA1310_1955, RNA1509_4482} {RNA1509_4482, RNA815_2913.1}
4.	MligTC455_25439	669	13.95	Mlig455_006324	Neo: Irradiation Age: - Region-specific R5: 2.180 Region-enriched R5: 1.387/0.00026	PWP2	0.966	-	-	-	0.966	-	-	Mlig455_006324 {REF} {Length: 3362} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=136.5]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=84.8]; Dip2/Utp12 Family [PF04003.14, score=38.1]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=23.6]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=21.4]} {Human: ENSG00000241945, PWP2, PWP2, small subunit processome component, [RH, Score=516, Expect=2e-168]; ENSG00000275464, FP565260.1, periodic tryptophan protein 2 homolog, [RH, Score=514, Expect=8e-168]} {Mouse: ENSMUSG00000032834, Pwp2, PWP2 periodic tryptophan protein homolog (yeast), [RH, Score=500, Expect=1e-162]} {Dmel: FBgn0033557, CG12325, [RH, Score=518, Expect=3e-169]} {Celegans: WBGene00018891, F55F8.3, Periodic tryptophan protein 2 homolog, [RH, Score=404, Expect=4e-126]} {Smed: dd_Smed_v6_6675_0_1, dd_Smed_v6_6675_0_1, [RH, Score=431, Expect=4e-137]} {RNA1509_25628, RNA1509_5746} {RNA1310_3870, RNA1509_25628, RNA1509_5746} {RNA1509_25628, RNA1509_5746, RNA815_1579}
5.	MligTC455_52304	832	17.34	Mlig455_000381	Neo: - Age: - Regeneration-upregulated BL: 2.051 Regeneration-enriched BL: 2.051	SETD2	0.963	-	-	-	0.963	-	-	Mlig455_000381 {REF} {Length: 6671} {TRANSSPLICED} {Pfam: SRI (Set2 Rpb1 interacting) domain [PF08236.13, score=55.4]; AWS domain [PF17907.3, score=41.0]; WW domain [PF00397.28, score=28.1]; SET domain [PF00856.30, score=22.8]} {Human: ENSG00000181555, SETD2, SET domain containing 2, [Score=148, Expect=9e-35]} {Mouse: ENSMUSG00000044791, Setd2, SET domain containing 2, [Score=151, Expect=8e-36]} {Dmel: FBgn0030486, Set2, SET domain containing 2, [Score=119, Expect=4e-26]} {Celegans: WBGene00003040, lin-59, Probable histone-lysine N-methyltransferase lin-59, [Score=73.2, Expect=2e-12]} {Smed: dd_Smed_v6_10742_0_1, dd_Smed_v6_10742_0_1, [Score=157, Expect=5e-38]} {RNA1509_40884, RNA1509_46851} {RNA1310_803, RNA1509_40884} {RNA1509_40884, RNA815_9944}
6.	MligTC455_28550	147	3.06	Mlig455_048750	Neo: - Age: logFC(26M/2M)=1.038 Region-enriched R5: 2.521/0.03072	NDRG1	0.962	-	-	-	0.962	-	-	Mlig455_048750 {REF} {Length: 2415} {TRANSSPLICED} {Pfam: Ndr family [PF03096.16, score=186.2]} {Human: ENSG00000104419, NDRG1, N-myc downstream regulated 1, [Score=125, Expect=9e-32]; ENSG00000101079, NDRG3, NDRG family member 3, [Score=122, Expect=1e-30]} {Mouse: ENSMUSG00000027634, Ndrg3, N-myc downstream regulated gene 3, [Score=119, Expect=1e-29]; ENSMUSG00000005125, Ndrg1, N-myc downstream regulated gene 1, [Score=118, Expect=3e-29]} {Dmel: FBgn0043070, MESK2, Misexpression suppressor of KSR 2, [Score=127, Expect=2e-32]} {Celegans: WBGene00013020, Y48G10A.3, [RH, Score=117, Expect=1e-29]} {Smed: dd_Smed_v6_1911_0_1, dd_Smed_v6_1911_0_1, [Score=226, Expect=2e-70]} {RNA1509_13688} {RNA1310_24392} {RNA815_9919}
7.	MligTC455_52305	908	18.92	Mlig455_067955	Neo: - Age: - Regeneration-upregulated BL: 2.181 Regeneration-enriched BL: 2.181		0.962	-	-	-	0.962	-	-	Mlig455_067955 {REF} {Length: 2395} {RNA1509_46851} {RNA1310_2054} {RNA815_12410}
8.	MligTC455_45328	307	6.41	Mlig455_069747	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.371 Region-enriched R2: 3.524/0.00087	CBY1	0.958	-	-	-	0.958	-	-	Mlig455_069747 {REF} {Length: 1865} {Pfam: Chibby family [PF14645.8, score=103.6]} {Human: ENSG00000100211, CBY1, chibby family member 1, beta catenin antagonist, [RH, Score=85.5, Expect=1e-21]} {Mouse: ENSMUSG00000022428, Cby1, chibby family member 1, beta catenin antagonist, [RH, Score=95.9, Expect=3e-26]} {Smed: dd_Smed_v6_11618_0_1, dd_Smed_v6_11618_0_1, [Score=54.7, Expect=1e-10]} {RNA1509_21398, RNA1509_56624} {RNA1310_30284, RNA1509_56624} {RNA1509_56624, RNA815_13488}
9.	MligTC455_39510	474	9.87	Mlig455_006709	Neo: - Age: - Region-enriched R5: 1.386/0.00414	MOGS	0.957	-	-	-	0.957	-	-	Mlig455_006709 {REF} {Length: 2607} {Pfam: Glycosyl hydrolase family 63 C-terminal domain [PF03200.18, score=436.6]} {Human: ENSG00000115275, MOGS, mannosyl-oligosaccharide glucosidase, [Score=241, Expect=5e-73]} {Mouse: ENSMUSG00000030036, Mogs, mannosyl-oligosaccharide glucosidase, [Score=243, Expect=8e-72]} {Dmel: FBgn0030289, GCS1, Glucosidase 1, [Score=256, Expect=6e-77]} {Celegans: WBGene00008775, mogs-1, Mannosyl-oligosaccharide glucosidase, [Score=261, Expect=4e-79]} {Smed: dd_Smed_v6_2406_0_1, dd_Smed_v6_2406_0_1, [Score=293, Expect=6e-91]} {RNA1509_6413} {RNA1310_2832} {RNA815_1935}
10.	MligTC455_51148	51	1.06	Mlig455_020351	Neo: - Age: -		0.956	-	-	-	-	0.956	-	Mlig455_020351 {REF} {Length: 738} {NoTransDecoderORF} {RNA1509_51494} {RNA1310_38751}
11.	MligTC455_49220	49	1.01	Mlig455_035853	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_035853 {REF} {Length: 1375} {RNA1509_52052} {RNA1310_50539} {RNA815_453.2}
12.	MligTC455_33868	554	11.55	Mlig455_005238	Neo: - Age: -	MED13	0.954	-	-	-	0.954	-	-	Mlig455_005238 {REF} {Length: 7105} {Pfam: Mediator complex subunit 13 C-terminal domain [PF06333.14, score=204.1]; Mediator complex subunit 13 N-terminal [PF11597.10, score=49.4]} {Human: ENSG00000108510, MED13, mediator complex subunit 13, [RH, Score=213, Expect=1e-54]; ENSG00000123066, MED13L, mediator complex subunit 13 like, [RH, Score=203, Expect=9e-52]} {Mouse: ENSMUSG00000034297, Med13, mediator complex subunit 13, [RH, Score=213, Expect=6e-55]} {Dmel: FBgn0003415, skd, skuld, [RH, Score=199, Expect=1e-50]} {Celegans: WBGene00002295, let-19, Mediator of RNA polymerase II transcription subunit 13, [RH, Score=145, Expect=2e-34]} {Smed: dd_Smed_v6_5628_0_1, dd_Smed_v6_5628_0_1, [RH, Score=176, Expect=4e-44]} {RNA1509_5621} {RNA1310_887, RNA1509_5621} {RNA1509_5621, RNA815_2444}
13.	MligTC455_14537	64	1.33	Mlig455_029886	Neo: - Age: -		0.95	-	-	-	0.950	-	-	Mlig455_029886 {REF} {Length: 889} {Pfam: FR47-like protein [PF08445.12, score=29.8]; Acetyltransferase (GNAT) domain [PF13508.9, score=28.6]; Acetyltransferase (GNAT) domain [PF13673.9, score=27.9]; Acetyltransferase (GNAT) family [PF00583.27, score=21.6]} {Celegans: WBGene00020390, T10B5.4, [RH, Score=48.5, Expect=1e-06]} {RNA1310_50011.2} {RNA815_19985.1}

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