Data search
Results for MligTC455_27693
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_27693 | 404 | 8.42 | Mlig455_054064 | Neo: - Age: - |
Mlig455_054064 {REF} {Length: 1804} {NoTransDecoderORF} {RNA1509_10424} {RNA1310_37328} {RNA815_3801} |
Cumulative graph for MligTC455_27693
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.661 | 3.488 | 0.17661 | 0.80348 | |
| RegionR2 | 1.332 | 3.488 | 0.11084 | 0.41133 | |
| RegionR3 | 0.051 | 3.488 | 0.83205 | 1.00000 | |
| RegionR4 | 0.7 | 3.488 | 0.44569 | 0.77471 | |
| RegionR5 | 1.309 | 3.488 | 0.04613 | 0.17688 | |
| RegionR6 | 0.552 | 3.488 | 0.53944 | 1.00000 | |
| RegionR7 | 0.29 | 3.488 | 0.74033 | 1.00000 | |
| RegionR8 | 1.427 | 3.488 | 0.20296 | 0.80181 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 5.871 | 3.488 | 0.19670 | 0.93585 | |
| RegenerationR2 | 0.044 | 3.488 | 0.91220 | 1.00000 | |
| RegenerationR3 | 0.918 | 3.488 | 0.07777 | 0.46105 | |
| RegenerationR4 | 0.259 | 3.488 | 0.60263 | 0.91424 | |
| RegenerationR5 | 0.113 | 3.488 | 0.79368 | 0.98713 | |
| RegenerationR6 | 0.84 | 3.488 | 0.09127 | 0.37577 | |
| RegenerationBL | 0.732 | 3.488 | 0.22411 | 0.57313 | |
| RegenerationTP | 0.133 | 3.488 | 0.85208 | 1.00000 |
Genes with expression patterns similar to MligTC455_27693
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_27693 | 404 | 8.42 | Mlig455_054064 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_054064 {REF} {Length: 1804} {NoTransDecoderORF} {RNA1509_10424} {RNA1310_37328} {RNA815_3801} | |
| 2. | MligTC455_27694 | 1453 | 30.28 | Mlig455_010036, Mlig455_054063, Mlig455_063282 | Neo: - Age: - |
DCC | 5.809 | 0.980 | 0.975 | 0.973 | 0.987 | 0.915 | 0.979 | Mlig455_010036 {REF} {Length: 4981} {Pfam: Fibronectin type III domain [PF00041.23, score=147.7]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=52.7]; Immunoglobulin domain [PF13895.8, score=24.6]; T-cell surface glycoprotein CD3 delta chain [PF16680.7, score=23.2]; Interferon-alpha/beta receptor, fibronectin type III [PF09294.12, score=22.7]; Immunoglobulin domain [PF13927.8, score=21.3]} {Human: ENSG00000187323, DCC, DCC netrin 1 receptor, [Score=97.4, Expect=9e-20]} {Mouse: ENSMUSG00000060534, Dcc, deleted in colorectal carcinoma, [Score=98.2, Expect=4e-20]} {Dmel: FBgn0265296, Dscam2, Down syndrome cell adhesion molecule 2, [Score=67.4, Expect=8e-11]} {Celegans: WBGene00009717, dep-1, Receptor-type tyrosine-protein phosphatase dep-1, [Score=55.8, Expect=2e-07]} {Smed: dd_Smed_v6_10176_0_1, dd_Smed_v6_10176_0_1, [Score=80.1, Expect=6e-15]} {RNA1509_17100} {RNA1310_1215.1} {RNA815_6811.1} Mlig455_054063 {REF} {Length: 4978} {Pfam: Fibronectin type III domain [PF00041.23, score=143.5]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=48.6]; Immunoglobulin domain [PF13895.8, score=24.5]; T-cell surface glycoprotein CD3 delta chain [PF16680.7, score=23.2]; Tissue factor [PF01108.19, score=22.2]; Immunoglobulin domain [PF13927.8, score=21.3]; Interferon-alpha/beta receptor, fibronectin type III [PF09294.12, score=20.1]} {Human: ENSG00000187323, DCC, DCC netrin 1 receptor, [Score=97.1, Expect=1e-19]} {Mouse: ENSMUSG00000060534, Dcc, deleted in colorectal carcinoma, [Score=98.2, Expect=4e-20]} {Dmel: FBgn0265296, Dscam2, Down syndrome cell adhesion molecule 2, [Score=61.2, Expect=7e-09]} {Celegans: WBGene00009717, dep-1, Receptor-type tyrosine-protein phosphatase dep-1, [Score=56.2, Expect=2e-07]} {Smed: dd_Smed_v6_10176_0_1, dd_Smed_v6_10176_0_1, [Score=83.6, Expect=6e-16]} {RNA1509_10424, RNA1509_17100} {RNA1310_1215.1, RNA1509_10424, RNA1509_17100} {RNA1509_10424, RNA1509_17100, RNA815_6811.1} Mlig455_063282 {REF} {Length: 5009} {Pfam: Fibronectin type III domain [PF00041.23, score=148.6]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=53.7]; Interferon-alpha/beta receptor, fibronectin type III [PF09294.12, score=23.4]; Tissue factor [PF01108.19, score=22.8]} {Human: ENSG00000187323, DCC, DCC netrin 1 receptor, [Score=98.2, Expect=3e-20]} {Mouse: ENSMUSG00000060534, Dcc, deleted in colorectal carcinoma, [Score=99.4, Expect=2e-20]} {Dmel: FBgn0265296, Dscam2, Down syndrome cell adhesion molecule 2, [Score=63.2, Expect=1e-09]} {Celegans: WBGene00009717, dep-1, Receptor-type tyrosine-protein phosphatase dep-1, [Score=55.5, Expect=2e-07]} {Smed: dd_Smed_v6_10176_0_1, dd_Smed_v6_10176_0_1, [Score=80.5, Expect=4e-15]} {RNA1509_41673} {RNA1310_1215.1, RNA1509_41673} {RNA1509_41673, RNA815_3801} |
| 3. | MligTC455_52212 | 1606 | 33.46 | Mlig455_014430 | Neo: - Age: - Regeneration-upregulated BL: 1.347 Regeneration-enriched BL: 1.347 |
MARK2 | 2.578 | 0.810 | - | - | 0.963 | - | 0.805 | Mlig455_014430 {REF} {Length: 5942} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=253.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=155.0]; Kinase associated domain 1 [PF02149.21, score=67.5]; Kinase-like [PF14531.8, score=29.6]; ABC1 atypical kinase-like domain [PF03109.18, score=27.7]; RIO1 family [PF01163.24, score=19.2]} {Human: ENSG00000072518, MARK2, microtubule affinity regulating kinase 2, [RH, Score=574, Expect=0.0]; ENSG00000075413, MARK3, microtubule affinity regulating kinase 3, [RH, Score=571, Expect=0.0]; ENSG00000007047, MARK4, microtubule affinity regulating kinase 4, [RH, Score=559, Expect=0.0]; ENSG00000116141, MARK1, microtubule affinity regulating kinase 1, [RH, Score=551, Expect=0.0]} {Mouse: ENSMUSG00000024969, Mark2, MAP/microtubule affinity regulating kinase 2, [RH, Score=573, Expect=0.0]; ENSMUSG00000007411, Mark3, MAP/microtubule affinity regulating kinase 3, [RH, Score=569, Expect=0.0]; ENSMUSG00000030397, Mark4, MAP/microtubule affinity regulating kinase 4, [RH, Score=554, Expect=0.0]; ENSMUSG00000026620, Mark1, MAP/microtubule affinity regulating kinase 1, [RH, Score=551, Expect=0.0]} {Dmel: FBgn0260934, par-1, [RH, Score=566, Expect=0.0]} {Celegans: WBGene00003916, par-1, Serine/threonine-protein kinase par-1, [RH, Score=555, Expect=7e-180]} {Smed: dd_Smed_v6_3685_0_1, dd_Smed_v6_3685_0_1, [RH, Score=585, Expect=0.0]} {RNA1509_2419} {RNA1310_1494} {RNA815_6824} |
| 4. | MligTC455_52213 | 1604 | 33.41 | Mlig455_070178 | Neo: - Age: - Regeneration-upregulated BL: 1.322 Regeneration-enriched BL: 1.322 |
MARK2 | 2.543 | 0.812 | - | - | 0.958 | - | 0.773 | Mlig455_070178 {REF} {Length: 4522} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=253.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=154.7]; Kinase-like [PF14531.8, score=30.7]; ABC1 atypical kinase-like domain [PF03109.18, score=27.9]; RIO1 family [PF01163.24, score=19.2]} {Human: ENSG00000072518, MARK2, microtubule affinity regulating kinase 2, [RH, Score=575, Expect=0.0]; ENSG00000075413, MARK3, microtubule affinity regulating kinase 3, [RH, Score=571, Expect=0.0]; ENSG00000007047, MARK4, microtubule affinity regulating kinase 4, [RH, Score=559, Expect=0.0]; ENSG00000116141, MARK1, microtubule affinity regulating kinase 1, [RH, Score=552, Expect=0.0]} {Mouse: ENSMUSG00000024969, Mark2, MAP/microtubule affinity regulating kinase 2, [RH, Score=575, Expect=0.0]; ENSMUSG00000007411, Mark3, MAP/microtubule affinity regulating kinase 3, [RH, Score=570, Expect=0.0]; ENSMUSG00000030397, Mark4, MAP/microtubule affinity regulating kinase 4, [RH, Score=553, Expect=0.0]; ENSMUSG00000026620, Mark1, MAP/microtubule affinity regulating kinase 1, [RH, Score=550, Expect=0.0]} {Dmel: FBgn0260934, par-1, [RH, Score=566, Expect=0.0]} {Celegans: WBGene00003916, par-1, Serine/threonine-protein kinase par-1, [RH, Score=555, Expect=0.0]} {Smed: dd_Smed_v6_3685_0_1, dd_Smed_v6_3685_0_1, [RH, Score=585, Expect=0.0]} {RNA1509_2419} {RNA1310_1494} {RNA815_2395} |
| 5. | MligTC455_54802 | 749 | 15.6 | Mlig455_064887 | Neo: - Age: - |
1.842 | - | - | - | 0.884 | - | 0.958 | Mlig455_064887 {REF} {Length: 5} {TRANSSPLICED} {NoTransDecoderORF} | |
| 6. | MligTC455_44639 | 1091 | 22.73 | Mlig455_022781, Mlig455_022971 | Neo: - Age: - |
NLGN4X | 0.971 | - | - | - | - | - | 0.971 | Mlig455_022781 {REF} {Length: 3405} {TRANSSPLICED} {Pfam: Carboxylesterase family [PF00135.30, score=392.4]} {Human: ENSG00000146938, NLGN4X, neuroligin 4 X-linked, [RH, Score=242, Expect=1e-68]; ENSG00000165246, NLGN4Y, neuroligin 4 Y-linked, [RH, Score=240, Expect=5e-68]; ENSG00000196338, NLGN3, neuroligin 3, [RH, Score=238, Expect=2e-67]; ENSG00000169760, NLGN1, neuroligin 1, [RH, Score=230, Expect=1e-64]} {Mouse: ENSMUSG00000063887, Nlgn1, neuroligin 1, [RH, Score=233, Expect=9e-66]; ENSMUSG00000031302, Nlgn3, neuroligin 3, [RH, Score=230, Expect=1e-64]} {Dmel: FBgn0001987, Gli, Gliotactin, [RH, Score=224, Expect=3e-62]} {Celegans: WBGene00018878, glit-1, GLIoTactin (Drosophila neuroligin-like) homolog, [RH, Score=184, Expect=5e-49]} {Smed: dd_Smed_v6_4935_0_1, dd_Smed_v6_4935_0_1, [RH, Score=635, Expect=0.0]} {RNA1509_17927, RNA1509_9481} {RNA1310_4342.1, RNA1509_17927, RNA1509_9481} {RNA1509_17927, RNA1509_9481, RNA815_2964.1} Mlig455_022971 {REF} {Length: 3491} {TRANSSPLICED} {Pfam: Carboxylesterase family [PF00135.30, score=392.1]} {Human: ENSG00000146938, NLGN4X, neuroligin 4 X-linked, [RH, Score=242, Expect=9e-69]; ENSG00000165246, NLGN4Y, neuroligin 4 Y-linked, [RH, Score=240, Expect=4e-68]; ENSG00000196338, NLGN3, neuroligin 3, [RH, Score=239, Expect=1e-67]; ENSG00000169760, NLGN1, neuroligin 1, [RH, Score=231, Expect=1e-64]} {Mouse: ENSMUSG00000063887, Nlgn1, neuroligin 1, [RH, Score=233, Expect=9e-66]; ENSMUSG00000031302, Nlgn3, neuroligin 3, [RH, Score=231, Expect=8e-65]} {Dmel: FBgn0001987, Gli, Gliotactin, [RH, Score=226, Expect=6e-63]} {Celegans: WBGene00018878, glit-1, GLIoTactin (Drosophila neuroligin-like) homolog, [RH, Score=184, Expect=5e-49]} {Smed: dd_Smed_v6_4935_0_1, dd_Smed_v6_4935_0_1, [RH, Score=633, Expect=0.0]} {RNA1509_48063} {RNA1310_4342.1, RNA1509_48063} {RNA1509_48063, RNA815_2964.1} |
| 7. | MligTC455_19637 | 2110 | 43.95 | Mlig455_015648 | Neo: - Age: - |
0.968 | - | - | - | 0.968 | - | - | Mlig455_015648 {REF} {Length: 4085} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=39.2]; HMG-box domain [PF09011.12, score=32.4]} {Smed: dd_Smed_v6_10010_0_1, dd_Smed_v6_10010_0_1, [Score=47.8, Expect=9e-06]} {RNA1509_3630} {RNA1310_12490} {RNA815_3935} | |
| 8. | MligTC455_38892 | 614 | 12.79 | Mlig455_017247 | Neo: - Age: - |
STRN3 | 0.967 | - | - | - | 0.967 | - | - | Mlig455_017247 {REF} {Length: 3566} {Pfam: Striatin family [PF08232.14, score=143.5]; WD domain, G-beta repeat [PF00400.34, score=101.9]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=31.5]} {Human: ENSG00000196792, STRN3, striatin 3, [RH, Score=506, Expect=3e-169]; ENSG00000115808, STRN, striatin, [RH, Score=504, Expect=2e-169]} {Mouse: ENSMUSG00000020954, Strn3, striatin, calmodulin binding protein 3, [RH, Score=514, Expect=3e-172]} {Dmel: FBgn0044323, Cka, Connector of kinase to AP-1, [RH, Score=349, Expect=2e-109]} {Celegans: WBGene00010631, cash-1, CKA And Striatin Homolog, [Score=423, Expect=6e-139]} {Smed: dd_Smed_v6_10974_0_1, dd_Smed_v6_10974_0_1, [RH, Score=380, Expect=8e-123]} {RNA1509_5874} {RNA1310_3754, RNA1509_5874} {RNA1509_5874, RNA815_9384} |
| 9. | MligTC455_36881 | 2253 | 46.95 | Mlig455_017274 | Neo: - Age: Up-Down-Down |
FLNA | 0.96 | - | - | - | 0.960 | - | - | Mlig455_017274 {REF} {Length: 10009} {Pfam: Filamin/ABP280 repeat [PF00630.21, score=990.1]; Calponin homology (CH) domain [PF00307.33, score=137.2]; Y_Y_Y domain [PF07495.15, score=55.8]; YtkA-like [PF13115.8, score=45.7]; Bacterial Ig-like domain (group 3) [PF16640.7, score=34.6]; CopC domain [PF04234.14, score=21.0]; CAMSAP CH domain [PF11971.10, score=18.3]} {Human: ENSG00000196924, FLNA, filamin A, [Score=1225, Expect=0.0]} {Mouse: ENSMUSG00000031328, Flna, filamin, alpha, [Score=1536, Expect=0.0]} {Dmel: FBgn0014141, cher, cheerio, [Score=1167, Expect=0.0]} {Celegans: WBGene00022048, fln-1, FiLamiN (Actin binding protein) homolog, [RH, Score=706, Expect=0.0]} {Smed: dd_Smed_v6_810_0_1, dd_Smed_v6_810_0_1, [RH, Score=1346, Expect=0.0]} {RNA1509_1689} {RNA1310_3926} {RNA815_150} |
| 10. | MligTC455_51519 | 1678 | 34.95 | Mlig455_029240 | Neo: - Age: - |
CREBBP | 0.953 | - | - | - | 0.953 | - | - | Mlig455_029240 {REF} {Length: 6874} {TRANSSPLICED} {Pfam: Histone acetylation protein [PF08214.13, score=213.3]; KIX domain [PF02172.18, score=106.6]; TAZ zinc finger [PF02135.18, score=78.1]; Bromodomain [PF00439.27, score=64.3]; Domain of Unknown Function (DUF902) [PF06001.15, score=55.5]; Zinc finger, ZZ type [PF00569.19, score=42.1]; KIX domain [PF16987.7, score=24.8]} {Human: ENSG00000005339, CREBBP, CREB binding protein, [RH, Score=897, Expect=0.0]; ENSG00000100393, EP300, E1A binding protein p300, [RH, Score=882, Expect=0.0]} {Mouse: ENSMUSG00000022521, Crebbp, CREB binding protein, [RH, Score=895, Expect=0.0]; ENSMUSG00000055024, Ep300, E1A binding protein p300, [RH, Score=875, Expect=0.0]} {Dmel: FBgn0261617, nej, nejire, [RH, Score=893, Expect=0.0]} {Celegans: WBGene00000366, cbp-1, [RH, Score=853, Expect=0.0]} {Smed: dd_Smed_v6_7719_0_1, dd_Smed_v6_7719_0_1, [RH, Score=937, Expect=0.0]} {RNA1509_1063} {RNA1310_739.1} {RNA815_341} |
| 11. | MligTC455_26646 | 1270 | 26.47 | Mlig455_036193, Mlig455_036200 | Neo: Irradiation Age: - Region-enriched R4: 2.027/0.00054 Regeneration-downregulated R4: -2.228 Regeneration-depleted R4: -2.228 |
GIPC3, PTPN23 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_036193 {REF} {Length: 6626} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=62.9]} {Human: ENSG00000179855, GIPC3, GIPC PDZ domain containing family member 3, [Score=58.9, Expect=7e-08]} {Mouse: ENSMUSG00000050463, Krt78, keratin 78, [Score=70.9, Expect=1e-11]} {Dmel: FBgn0052656, Muc11A, Mucin 11A, [Score=99.8, Expect=1e-20]} {Celegans: WBGene00021507, Y41D4A.5, Protein-tyrosine-phosphatase, [Score=54.7, Expect=3e-07]} {Smed: dd_Smed_v6_3351_0_2, dd_Smed_v6_3351_0_2, [Score=126, Expect=5e-29]} {RNA1509_13027, RNA1509_26323, RNA1509_55968} {RNA1310_12276.2, RNA1509_13027, RNA1509_26323, RNA1509_55968} {RNA1509_13027, RNA1509_26323, RNA1509_55968, RNA815_6413} Mlig455_036200 {REF} {Length: 8454} {Pfam: BRO1-like domain [PF03097.20, score=305.8]; ALIX V-shaped domain binding to HIV [PF13949.8, score=96.6]; Protein-tyrosine phosphatase [PF00102.29, score=75.4]} {Human: ENSG00000076201, PTPN23, protein tyrosine phosphatase, non-receptor type 23, [RH, Score=408, Expect=1e-115]} {Mouse: ENSMUSG00000036057, Ptpn23, protein tyrosine phosphatase, non-receptor type 23, [RH, Score=412, Expect=5e-117]} {Dmel: FBgn0036448, mop, myopic, [RH, Score=371, Expect=1e-103]} {Celegans: WBGene00001215, ego-2, Enhancer of Glp-One (Glp-1); Enhancer of glp-1, [RH, Score=260, Expect=1e-69]} {Smed: dd_Smed_v6_3351_0_1, dd_Smed_v6_3351_0_1, [RH, Score=424, Expect=2e-121]} {RNA1509_6410} {RNA1310_2882.1} {RNA815_3253.1} |
| 12. | MligTC455_30355 | 947 | 19.73 | Mlig455_064109 | Neo: - Age: Up-Down-Down |
ARHGAP33 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_064109 {REF} {Length: 6157} {TRANSSPLICED} {Pfam: RhoGAP domain [PF00620.29, score=99.1]; Variant SH3 domain [PF14604.8, score=29.2]; Variant SH3 domain [PF07653.19, score=25.7]} {Human: ENSG00000004777, ARHGAP33, Rho GTPase activating protein 33, [Score=97.1, Expect=7e-20]} {Mouse: ENSMUSG00000036882, Arhgap33, Rho GTPase activating protein 33, [Score=97.1, Expect=5e-20]} {Dmel: FBgn0032821, CdGAPr, Cd GTPase activating protein-related, [Score=93.6, Expect=4e-19]} {Celegans: WBGene00009800, rrc-1, GTPase-activating protein rrc-1, [Score=68.6, Expect=1e-11]} {Smed: dd_Smed_v6_9033_0_1, dd_Smed_v6_9033_0_1, [Score=77.0, Expect=2e-14]} {RNA1509_20276, RNA1509_23237, RNA1509_35920, RNA1509_50097, RNA1509_5385} {RNA1310_5454, RNA1509_20276, RNA1509_23237, RNA1509_35920, RNA1509_50097, RNA1509_5385} {RNA1509_20276, RNA1509_23237, RNA1509_35920, RNA1509_50097, RNA1509_5385, RNA815_1652} |