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Data search

Results for MligTC455_27694

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_27694	1453	30.28	Mlig455_010036, Mlig455_054063, Mlig455_063282	Neo: - Age: -	DCC	Mlig455_010036 {REF} {Length: 4981} {Pfam: Fibronectin type III domain [PF00041.23, score=147.7]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=52.7]; Immunoglobulin domain [PF13895.8, score=24.6]; T-cell surface glycoprotein CD3 delta chain [PF16680.7, score=23.2]; Interferon-alpha/beta receptor, fibronectin type III [PF09294.12, score=22.7]; Immunoglobulin domain [PF13927.8, score=21.3]} {Human: ENSG00000187323, DCC, DCC netrin 1 receptor, [Score=97.4, Expect=9e-20]} {Mouse: ENSMUSG00000060534, Dcc, deleted in colorectal carcinoma, [Score=98.2, Expect=4e-20]} {Dmel: FBgn0265296, Dscam2, Down syndrome cell adhesion molecule 2, [Score=67.4, Expect=8e-11]} {Celegans: WBGene00009717, dep-1, Receptor-type tyrosine-protein phosphatase dep-1, [Score=55.8, Expect=2e-07]} {Smed: dd_Smed_v6_10176_0_1, dd_Smed_v6_10176_0_1, [Score=80.1, Expect=6e-15]} {RNA1509_17100} {RNA1310_1215.1} {RNA815_6811.1} Mlig455_054063 {REF} {Length: 4978} {Pfam: Fibronectin type III domain [PF00041.23, score=143.5]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=48.6]; Immunoglobulin domain [PF13895.8, score=24.5]; T-cell surface glycoprotein CD3 delta chain [PF16680.7, score=23.2]; Tissue factor [PF01108.19, score=22.2]; Immunoglobulin domain [PF13927.8, score=21.3]; Interferon-alpha/beta receptor, fibronectin type III [PF09294.12, score=20.1]} {Human: ENSG00000187323, DCC, DCC netrin 1 receptor, [Score=97.1, Expect=1e-19]} {Mouse: ENSMUSG00000060534, Dcc, deleted in colorectal carcinoma, [Score=98.2, Expect=4e-20]} {Dmel: FBgn0265296, Dscam2, Down syndrome cell adhesion molecule 2, [Score=61.2, Expect=7e-09]} {Celegans: WBGene00009717, dep-1, Receptor-type tyrosine-protein phosphatase dep-1, [Score=56.2, Expect=2e-07]} {Smed: dd_Smed_v6_10176_0_1, dd_Smed_v6_10176_0_1, [Score=83.6, Expect=6e-16]} {RNA1509_10424, RNA1509_17100} {RNA1310_1215.1, RNA1509_10424, RNA1509_17100} {RNA1509_10424, RNA1509_17100, RNA815_6811.1} Mlig455_063282 {REF} {Length: 5009} {Pfam: Fibronectin type III domain [PF00041.23, score=148.6]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=53.7]; Interferon-alpha/beta receptor, fibronectin type III [PF09294.12, score=23.4]; Tissue factor [PF01108.19, score=22.8]} {Human: ENSG00000187323, DCC, DCC netrin 1 receptor, [Score=98.2, Expect=3e-20]} {Mouse: ENSMUSG00000060534, Dcc, deleted in colorectal carcinoma, [Score=99.4, Expect=2e-20]} {Dmel: FBgn0265296, Dscam2, Down syndrome cell adhesion molecule 2, [Score=63.2, Expect=1e-09]} {Celegans: WBGene00009717, dep-1, Receptor-type tyrosine-protein phosphatase dep-1, [Score=55.5, Expect=2e-07]} {Smed: dd_Smed_v6_10176_0_1, dd_Smed_v6_10176_0_1, [Score=80.5, Expect=4e-15]} {RNA1509_41673} {RNA1310_1215.1, RNA1509_41673} {RNA1509_41673, RNA815_3801}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_27694

1453

30.28

Mlig455_010036, Mlig455_054063, Mlig455_063282

Neo: -

Age: -

DCC

Mlig455_010036 {REF} {Length: 4981} {Pfam: Fibronectin type III domain [PF00041.23, score=147.7]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=52.7]; Immunoglobulin domain [PF13895.8, score=24.6]; T-cell surface glycoprotein CD3 delta chain [PF16680.7, score=23.2]; Interferon-alpha/beta receptor, fibronectin type III [PF09294.12, score=22.7]; Immunoglobulin domain [PF13927.8, score=21.3]} {Human: ENSG00000187323, DCC, DCC netrin 1 receptor, [Score=97.4, Expect=9e-20]} {Mouse: ENSMUSG00000060534, Dcc, deleted in colorectal carcinoma, [Score=98.2, Expect=4e-20]} {Dmel: FBgn0265296, Dscam2, Down syndrome cell adhesion molecule 2, [Score=67.4, Expect=8e-11]} {Celegans: WBGene00009717, dep-1, Receptor-type tyrosine-protein phosphatase dep-1, [Score=55.8, Expect=2e-07]} {Smed: dd_Smed_v6_10176_0_1, dd_Smed_v6_10176_0_1, [Score=80.1, Expect=6e-15]} {RNA1509_17100} {RNA1310_1215.1} {RNA815_6811.1}

Mlig455_054063 {REF} {Length: 4978} {Pfam: Fibronectin type III domain [PF00041.23, score=143.5]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=48.6]; Immunoglobulin domain [PF13895.8, score=24.5]; T-cell surface glycoprotein CD3 delta chain [PF16680.7, score=23.2]; Tissue factor [PF01108.19, score=22.2]; Immunoglobulin domain [PF13927.8, score=21.3]; Interferon-alpha/beta receptor, fibronectin type III [PF09294.12, score=20.1]} {Human: ENSG00000187323, DCC, DCC netrin 1 receptor, [Score=97.1, Expect=1e-19]} {Mouse: ENSMUSG00000060534, Dcc, deleted in colorectal carcinoma, [Score=98.2, Expect=4e-20]} {Dmel: FBgn0265296, Dscam2, Down syndrome cell adhesion molecule 2, [Score=61.2, Expect=7e-09]} {Celegans: WBGene00009717, dep-1, Receptor-type tyrosine-protein phosphatase dep-1, [Score=56.2, Expect=2e-07]} {Smed: dd_Smed_v6_10176_0_1, dd_Smed_v6_10176_0_1, [Score=83.6, Expect=6e-16]} {RNA1509_10424, RNA1509_17100} {RNA1310_1215.1, RNA1509_10424, RNA1509_17100} {RNA1509_10424, RNA1509_17100, RNA815_6811.1}

Mlig455_063282 {REF} {Length: 5009} {Pfam: Fibronectin type III domain [PF00041.23, score=148.6]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=53.7]; Interferon-alpha/beta receptor, fibronectin type III [PF09294.12, score=23.4]; Tissue factor [PF01108.19, score=22.8]} {Human: ENSG00000187323, DCC, DCC netrin 1 receptor, [Score=98.2, Expect=3e-20]} {Mouse: ENSMUSG00000060534, Dcc, deleted in colorectal carcinoma, [Score=99.4, Expect=2e-20]} {Dmel: FBgn0265296, Dscam2, Down syndrome cell adhesion molecule 2, [Score=63.2, Expect=1e-09]} {Celegans: WBGene00009717, dep-1, Receptor-type tyrosine-protein phosphatase dep-1, [Score=55.5, Expect=2e-07]} {Smed: dd_Smed_v6_10176_0_1, dd_Smed_v6_10176_0_1, [Score=80.5, Expect=4e-15]} {RNA1509_41673} {RNA1310_1215.1, RNA1509_41673} {RNA1509_41673, RNA815_3801}

Cumulative graph for MligTC455_27694

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-7.544	5.145	0.01317	0.32323
RegionR2	1.264	5.145	0.11508	0.41953
RegionR3	0.448	5.145	0.60193	1.00000
RegionR4	1.204	5.145	0.14441	0.38997
RegionR5	1.603	5.145	0.00892	0.05315
RegionR6	1.018	5.145	0.17926	0.74278
RegionR7	0.517	5.145	0.56986	1.00000
RegionR8	1.491	5.145	0.07293	0.51649

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	7.791	5.145	0.01670	0.54049
RegenerationR2	0.09	5.145	0.84470	1.00000
RegenerationR3	0.766	5.145	0.13377	0.55712
RegenerationR4	0.265	5.145	0.61962	0.92055
RegenerationR5	0.13	5.145	0.78885	0.98481
RegenerationR6	0.681	5.145	0.17087	0.50227
RegenerationBL	0.774	5.145	0.11536	0.40181
RegenerationTP	-0.002	5.145	0.99672	1.00000

Genes with expression patterns similar to MligTC455_27694

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_27694	1453	30.28	Mlig455_010036, Mlig455_054063, Mlig455_063282	Neo: - Age: -	DCC	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_010036 {REF} {Length: 4981} {Pfam: Fibronectin type III domain [PF00041.23, score=147.7]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=52.7]; Immunoglobulin domain [PF13895.8, score=24.6]; T-cell surface glycoprotein CD3 delta chain [PF16680.7, score=23.2]; Interferon-alpha/beta receptor, fibronectin type III [PF09294.12, score=22.7]; Immunoglobulin domain [PF13927.8, score=21.3]} {Human: ENSG00000187323, DCC, DCC netrin 1 receptor, [Score=97.4, Expect=9e-20]} {Mouse: ENSMUSG00000060534, Dcc, deleted in colorectal carcinoma, [Score=98.2, Expect=4e-20]} {Dmel: FBgn0265296, Dscam2, Down syndrome cell adhesion molecule 2, [Score=67.4, Expect=8e-11]} {Celegans: WBGene00009717, dep-1, Receptor-type tyrosine-protein phosphatase dep-1, [Score=55.8, Expect=2e-07]} {Smed: dd_Smed_v6_10176_0_1, dd_Smed_v6_10176_0_1, [Score=80.1, Expect=6e-15]} {RNA1509_17100} {RNA1310_1215.1} {RNA815_6811.1} Mlig455_054063 {REF} {Length: 4978} {Pfam: Fibronectin type III domain [PF00041.23, score=143.5]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=48.6]; Immunoglobulin domain [PF13895.8, score=24.5]; T-cell surface glycoprotein CD3 delta chain [PF16680.7, score=23.2]; Tissue factor [PF01108.19, score=22.2]; Immunoglobulin domain [PF13927.8, score=21.3]; Interferon-alpha/beta receptor, fibronectin type III [PF09294.12, score=20.1]} {Human: ENSG00000187323, DCC, DCC netrin 1 receptor, [Score=97.1, Expect=1e-19]} {Mouse: ENSMUSG00000060534, Dcc, deleted in colorectal carcinoma, [Score=98.2, Expect=4e-20]} {Dmel: FBgn0265296, Dscam2, Down syndrome cell adhesion molecule 2, [Score=61.2, Expect=7e-09]} {Celegans: WBGene00009717, dep-1, Receptor-type tyrosine-protein phosphatase dep-1, [Score=56.2, Expect=2e-07]} {Smed: dd_Smed_v6_10176_0_1, dd_Smed_v6_10176_0_1, [Score=83.6, Expect=6e-16]} {RNA1509_10424, RNA1509_17100} {RNA1310_1215.1, RNA1509_10424, RNA1509_17100} {RNA1509_10424, RNA1509_17100, RNA815_6811.1} Mlig455_063282 {REF} {Length: 5009} {Pfam: Fibronectin type III domain [PF00041.23, score=148.6]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=53.7]; Interferon-alpha/beta receptor, fibronectin type III [PF09294.12, score=23.4]; Tissue factor [PF01108.19, score=22.8]} {Human: ENSG00000187323, DCC, DCC netrin 1 receptor, [Score=98.2, Expect=3e-20]} {Mouse: ENSMUSG00000060534, Dcc, deleted in colorectal carcinoma, [Score=99.4, Expect=2e-20]} {Dmel: FBgn0265296, Dscam2, Down syndrome cell adhesion molecule 2, [Score=63.2, Expect=1e-09]} {Celegans: WBGene00009717, dep-1, Receptor-type tyrosine-protein phosphatase dep-1, [Score=55.5, Expect=2e-07]} {Smed: dd_Smed_v6_10176_0_1, dd_Smed_v6_10176_0_1, [Score=80.5, Expect=4e-15]} {RNA1509_41673} {RNA1310_1215.1, RNA1509_41673} {RNA1509_41673, RNA815_3801}
2.	MligTC455_27693	404	8.42	Mlig455_054064	Neo: - Age: -		5.809	0.980	0.975	0.973	0.987	0.915	0.979	Mlig455_054064 {REF} {Length: 1804} {NoTransDecoderORF} {RNA1509_10424} {RNA1310_37328} {RNA815_3801}
3.	MligTC455_54802	749	15.6	Mlig455_064887	Neo: - Age: -		1.796	-	-	-	0.844	-	0.952	Mlig455_064887 {REF} {Length: 5} {TRANSSPLICED} {NoTransDecoderORF}
4.	MligTC455_07589	1109	23.1	Mlig455_034492, Mlig455_066261	Neo: Irradiation Age: logFC(26M/2M)=0.229	KDM2A	1.672	0.719	-	-	-	-	0.953	Mlig455_034492 {REF} {Length: 4234} {TRANSSPLICED} {Pfam: PHD-finger [PF16866.7, score=40.4]; JmjC domain, hydroxylase [PF02373.24, score=38.0]; CXXC zinc finger domain [PF02008.22, score=37.8]; Cupin-like domain [PF13621.8, score=34.9]; Jumonji helical domain [PF17811.3, score=34.3]} {Human: ENSG00000173120, KDM2A, lysine demethylase 2A, [RH, Score=400, Expect=9e-128]; ENSG00000089094, KDM2B, lysine demethylase 2B, [RH, Score=392, Expect=3e-120]} {Mouse: ENSMUSG00000054611, Kdm2a, lysine (K)-specific demethylase 2A, [RH, Score=400, Expect=2e-124]; ENSMUSG00000029475, Kdm2b, lysine (K)-specific demethylase 2B, [RH, Score=388, Expect=3e-119]} {Dmel: FBgn0037659, Kdm2, Lysine (K)-specific demethylase 2, [RH, Score=442, Expect=5e-139]} {Celegans: WBGene00020821, jhdm-1, JmjC domain-containing histone demethylation protein 1, [RH, Score=298, Expect=4e-87]} {Smed: dd_Smed_v6_8433_0_4, dd_Smed_v6_8433_0_4, [RH, Score=388, Expect=3e-127]} {RNA1509_28232, RNA1509_33448, RNA1509_38538, RNA1509_7563} {RNA1310_7687, RNA1509_28232, RNA1509_33448, RNA1509_38538} {RNA1509_28232, RNA1509_33448, RNA1509_38538, RNA815_1140.1} Mlig455_066261 {REF} {Length: 4085} {TRANSSPLICED} {Pfam: PHD-finger [PF16866.7, score=40.4]; JmjC domain, hydroxylase [PF02373.24, score=38.0]; CXXC zinc finger domain [PF02008.22, score=37.8]; Cupin-like domain [PF13621.8, score=34.9]; Jumonji helical domain [PF17811.3, score=34.3]} {Human: ENSG00000173120, KDM2A, lysine demethylase 2A, [RH, Score=400, Expect=9e-128]; ENSG00000089094, KDM2B, lysine demethylase 2B, [RH, Score=391, Expect=3e-125]} {Mouse: ENSMUSG00000054611, Kdm2a, lysine (K)-specific demethylase 2A, [RH, Score=400, Expect=3e-124]; ENSMUSG00000029475, Kdm2b, lysine (K)-specific demethylase 2B, [RH, Score=388, Expect=3e-119]} {Dmel: FBgn0037659, Kdm2, Lysine (K)-specific demethylase 2, [RH, Score=442, Expect=7e-139]} {Celegans: WBGene00020821, jhdm-1, JmjC domain-containing histone demethylation protein 1, [RH, Score=298, Expect=5e-87]} {Smed: dd_Smed_v6_8433_0_4, dd_Smed_v6_8433_0_4, [RH, Score=388, Expect=4e-127]} {RNA1509_39600, RNA1509_7563} {RNA1310_7687, RNA1509_39600, RNA1509_7563} {RNA1509_39600, RNA1509_7563, RNA815_1140.1}
5.	MligTC455_44639	1091	22.73	Mlig455_022781, Mlig455_022971	Neo: - Age: -	NLGN4X	0.973	-	-	-	-	-	0.973	Mlig455_022781 {REF} {Length: 3405} {TRANSSPLICED} {Pfam: Carboxylesterase family [PF00135.30, score=392.4]} {Human: ENSG00000146938, NLGN4X, neuroligin 4 X-linked, [RH, Score=242, Expect=1e-68]; ENSG00000165246, NLGN4Y, neuroligin 4 Y-linked, [RH, Score=240, Expect=5e-68]; ENSG00000196338, NLGN3, neuroligin 3, [RH, Score=238, Expect=2e-67]; ENSG00000169760, NLGN1, neuroligin 1, [RH, Score=230, Expect=1e-64]} {Mouse: ENSMUSG00000063887, Nlgn1, neuroligin 1, [RH, Score=233, Expect=9e-66]; ENSMUSG00000031302, Nlgn3, neuroligin 3, [RH, Score=230, Expect=1e-64]} {Dmel: FBgn0001987, Gli, Gliotactin, [RH, Score=224, Expect=3e-62]} {Celegans: WBGene00018878, glit-1, GLIoTactin (Drosophila neuroligin-like) homolog, [RH, Score=184, Expect=5e-49]} {Smed: dd_Smed_v6_4935_0_1, dd_Smed_v6_4935_0_1, [RH, Score=635, Expect=0.0]} {RNA1509_17927, RNA1509_9481} {RNA1310_4342.1, RNA1509_17927, RNA1509_9481} {RNA1509_17927, RNA1509_9481, RNA815_2964.1} Mlig455_022971 {REF} {Length: 3491} {TRANSSPLICED} {Pfam: Carboxylesterase family [PF00135.30, score=392.1]} {Human: ENSG00000146938, NLGN4X, neuroligin 4 X-linked, [RH, Score=242, Expect=9e-69]; ENSG00000165246, NLGN4Y, neuroligin 4 Y-linked, [RH, Score=240, Expect=4e-68]; ENSG00000196338, NLGN3, neuroligin 3, [RH, Score=239, Expect=1e-67]; ENSG00000169760, NLGN1, neuroligin 1, [RH, Score=231, Expect=1e-64]} {Mouse: ENSMUSG00000063887, Nlgn1, neuroligin 1, [RH, Score=233, Expect=9e-66]; ENSMUSG00000031302, Nlgn3, neuroligin 3, [RH, Score=231, Expect=8e-65]} {Dmel: FBgn0001987, Gli, Gliotactin, [RH, Score=226, Expect=6e-63]} {Celegans: WBGene00018878, glit-1, GLIoTactin (Drosophila neuroligin-like) homolog, [RH, Score=184, Expect=5e-49]} {Smed: dd_Smed_v6_4935_0_1, dd_Smed_v6_4935_0_1, [RH, Score=633, Expect=0.0]} {RNA1509_48063} {RNA1310_4342.1, RNA1509_48063} {RNA1509_48063, RNA815_2964.1}
6.	MligTC455_19637	2110	43.95	Mlig455_015648	Neo: - Age: -		0.959	-	-	-	0.959	-	-	Mlig455_015648 {REF} {Length: 4085} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=39.2]; HMG-box domain [PF09011.12, score=32.4]} {Smed: dd_Smed_v6_10010_0_1, dd_Smed_v6_10010_0_1, [Score=47.8, Expect=9e-06]} {RNA1509_3630} {RNA1310_12490} {RNA815_3935}
7.	MligTC455_28717	469	9.77	Mlig455_064379	Neo: - Age: -	NBEA	0.958	-	-	-	0.958	-	-	Mlig455_064379 {REF} {Length: 4709} {Pfam: WD domain, G-beta repeat [PF00400.34, score=33.5]} {Human: ENSG00000172915, NBEA, neurobeachin, [Score=222, Expect=6e-65]; ENSG00000198589, LRBA, LPS responsive beige-like anchor protein, [Score=222, Expect=8e-65]} {Mouse: ENSMUSG00000027799, Nbea, neurobeachin, [Score=222, Expect=4e-65]; ENSMUSG00000028080, Lrba, LPS-responsive beige-like anchor, [Score=221, Expect=5e-66]} {Dmel: FBgn0266098, rg, rugose, [Score=304, Expect=1e-93]} {Celegans: WBGene00004760, sel-2, Putative neurobeachin homolog, [Score=182, Expect=1e-51]} {Smed: dd_Smed_v6_3880_0_1, dd_Smed_v6_3880_0_1, [Score=217, Expect=1e-63]} {RNA1509_10508} {RNA1310_12428} {RNA815_4322}
8.	MligTC455_09281	272	5.66	Mlig455_063308	Neo: - Age: -		0.956	-	-	-	-	-	0.956	Mlig455_063308 {REF} {Length: 1383} {RNA1509_43304} {RNA1310_30796.1} {RNA815_17805}
9.	MligTC455_36881	2253	46.95	Mlig455_017274	Neo: - Age: Up-Down-Down	FLNA	0.955	-	-	-	0.955	-	-	Mlig455_017274 {REF} {Length: 10009} {Pfam: Filamin/ABP280 repeat [PF00630.21, score=990.1]; Calponin homology (CH) domain [PF00307.33, score=137.2]; Y_Y_Y domain [PF07495.15, score=55.8]; YtkA-like [PF13115.8, score=45.7]; Bacterial Ig-like domain (group 3) [PF16640.7, score=34.6]; CopC domain [PF04234.14, score=21.0]; CAMSAP CH domain [PF11971.10, score=18.3]} {Human: ENSG00000196924, FLNA, filamin A, [Score=1225, Expect=0.0]} {Mouse: ENSMUSG00000031328, Flna, filamin, alpha, [Score=1536, Expect=0.0]} {Dmel: FBgn0014141, cher, cheerio, [Score=1167, Expect=0.0]} {Celegans: WBGene00022048, fln-1, FiLamiN (Actin binding protein) homolog, [RH, Score=706, Expect=0.0]} {Smed: dd_Smed_v6_810_0_1, dd_Smed_v6_810_0_1, [RH, Score=1346, Expect=0.0]} {RNA1509_1689} {RNA1310_3926} {RNA815_150}