M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_27814

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_27814 1123 23.40 Mlig455_000431, Mlig455_025465, Mlig455_026673, Mlig455_031368, Mlig455_038310, Mlig455_064148, Mlig455_066134

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.823

Regeneration-upregulated BL: 2.840

Regeneration-enriched BL: 2.840

Mlig455_000431 {REF} {Length: 7484} {RNA1509_16349, RNA1509_55826} {RNA1310_1311.1, RNA1509_16349, RNA1509_55826} {RNA1509_16349, RNA1509_55826, RNA815_19414}

Mlig455_025465 {REF} {Length: 2972} {RNA1509_8341} {RNA1310_843} {RNA815_1305.1}

Mlig455_026673 {REF} {Length: 758} {RNA1509_8341} {RNA1310_50077} {RNA815_2170.1}

Mlig455_031368 {REF} {Length: 392} {NoTransDecoderORF} {RNA1509_13206} {RNA1310_1311.1} {RNA815_19414}

Mlig455_038310 {REF} {Length: 963} {RNA1509_8341} {RNA1310_50077} {RNA815_2170.1}

Mlig455_064148 {REF} {Length: 5448} {TRANSSPLICED} {RNA1509_8946} {RNA1310_3396.1} {RNA815_1342.1}

Mlig455_066134 {REF} {Length: 3326} {RNA1509_8341} {RNA1310_843, RNA1509_8341} {RNA1509_8341, RNA815_2170.1}

Cumulative graph for MligTC455_27814

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -5.383 4.794 0.22999 0.87351
RegionR2 2.111 4.794 0.02833 0.18976
RegionR3 1.006 4.794 0.30359 0.84515
RegionR4 0.938 4.794 0.35661 0.67913
RegionR5 -0.021 4.794 0.85962 1.00000
RegionR6 0.702 4.794 0.49709 1.00000
RegionR7 1 4.794 0.39627 1.00000
RegionR8 -0.354 4.794 0.94278 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 2.829 4.794 0.63682 1.00000
RegenerationR2 0.845 4.794 0.17541 0.61596
RegenerationR3 1 4.794 0.14344 0.57048
RegenerationR4 1.205 4.794 0.08743 0.46468
RegenerationR5 1.795 4.794 0.01151 0.18922
RegenerationR6 2.16 4.794 0.00361 0.07130
RegenerationBL 2.84 4.794 0.00016 0.00626 Specific for BL: 2.840
RegenerationTP 2.909 4.794 0.00083 0.04329


Genes with expression patterns similar to MligTC455_27814

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_27814 1123 23.4 Mlig455_000431, Mlig455_025465, Mlig455_026673, Mlig455_031368, Mlig455_038310, Mlig455_064148, Mlig455_066134

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.823

Regeneration-upregulated BL: 2.840

Regeneration-enriched BL: 2.840

 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_000431 {REF} {Length: 7484} {RNA1509_16349, RNA1509_55826} {RNA1310_1311.1, RNA1509_16349, RNA1509_55826} {RNA1509_16349, RNA1509_55826, RNA815_19414}

Mlig455_025465 {REF} {Length: 2972} {RNA1509_8341} {RNA1310_843} {RNA815_1305.1}

Mlig455_026673 {REF} {Length: 758} {RNA1509_8341} {RNA1310_50077} {RNA815_2170.1}

Mlig455_031368 {REF} {Length: 392} {NoTransDecoderORF} {RNA1509_13206} {RNA1310_1311.1} {RNA815_19414}

Mlig455_038310 {REF} {Length: 963} {RNA1509_8341} {RNA1310_50077} {RNA815_2170.1}

Mlig455_064148 {REF} {Length: 5448} {TRANSSPLICED} {RNA1509_8946} {RNA1310_3396.1} {RNA815_1342.1}

Mlig455_066134 {REF} {Length: 3326} {RNA1509_8341} {RNA1310_843, RNA1509_8341} {RNA1509_8341, RNA815_2170.1}
2. MligTC455_27815 1267 26.39 Mlig455_003681, Mlig455_007743, Mlig455_008454, Mlig455_014548, Mlig455_019559, Mlig455_023634, Mlig455_026256, Mlig455_029577, Mlig455_043741, Mlig455_070803

Neo: -

Age: logFC(26M/2M)=0.722

Regeneration-upregulated BL: 2.777

Regeneration-enriched BL: 2.777

 4.378 - 0.777 0.968 0.871 0.979 0.783

Mlig455_003681 {REF} {Length: 907} {RNA1509_8341} {RNA1310_50077} {RNA815_2170.1}

Mlig455_007743 {REF} {Length: 185} {NoTransDecoderORF} {RNA1509_8341} {RNA1310_76950} {RNA815_2170.1}

Mlig455_008454 {REF} {Length: 175} {NoTransDecoderORF} {RNA1509_8341} {RNA1310_76950} {RNA815_2170.1}

Mlig455_014548 {REF} {Length: 352} {RNA1509_8341} {RNA1310_50077} {RNA815_2170.1}

Mlig455_019559 {REF} {Length: 1856} {TRANSSPLICED} {RNA1509_8341} {RNA1310_843} {RNA815_2170.1}

Mlig455_023634 {REF} {Length: 1932} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_40233} {RNA1310_27331} {RNA815_2170.1}

Mlig455_026256 {REF} {Length: 1373} {RNA1509_13206} {RNA1310_1311.1} {RNA815_19414}

Mlig455_029577 {REF} {Length: 431} {RNA1509_40233} {RNA1310_27331} {RNA815_2170.2}

Mlig455_043741 {REF} {Length: 1856} {TRANSSPLICED} {RNA1509_8341} {RNA1310_843} {RNA815_2170.1}

Mlig455_070803 {REF} {Length: 7254} {RNA1509_55315} {RNA1310_14431} {RNA815_2170.1}
3. MligTC455_27810 296 6.16 Mlig455_014545, Mlig455_031367

Neo: -

Age: -

 3.681 - - 0.954 0.920 0.960 0.847

Mlig455_014545 {REF} {Length: 1192} {RNA1509_8341} {RNA1310_843} {RNA815_2170.1}

Mlig455_031367 {REF} {Length: 663} {RNA1509_8341} {RNA1310_50077} {RNA815_2170.1}
4. MligTC455_27806 83 1.72 Mlig455_038041

Neo: -

Age: -

 MAP3K4 2.601 - - 0.966 - 0.837 0.798 Mlig455_038041 {REF} {Length: 3811} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=157.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=116.5]; Ankyrin repeats (3 copies) [PF12796.9, score=71.6]; Ankyrin repeats (many copies) [PF13637.8, score=54.4]; Ankyrin repeats (many copies) [PF13857.8, score=54.3]; Ankyrin repeat [PF00023.32, score=54.2]; Ankyrin repeat [PF13606.8, score=40.3]; Fungal protein kinase [PF17667.3, score=26.7]} {Human: ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=132, Expect=9e-31]; ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=129, Expect=6e-31]} {Mouse: ENSMUSG00000014426, Map3k4, mitogen-activated protein kinase kinase kinase 4, [Score=128, Expect=1e-29]; ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=123, Expect=4e-29]} {Dmel: FBgn0024329, Mekk1, [Score=123, Expect=3e-28]} {Celegans: WBGene00015646, mlt-10, [RH, Score=178, Expect=7e-47]} {Smed: dd_Smed_v6_3286_0_6, dd_Smed_v6_3286_0_6, [Score=112, Expect=3e-26]} {RNA1509_50870} {RNA1310_4206} {RNA815_5812}
5. MligTC455_35175 109 2.26 Mlig455_046605

Neo: -

Age: -

 2.547 - - 0.950 0.884 - 0.713 Mlig455_046605 {REF} {Length: 1607} {RNA1509_37799} {RNA1310_173.2} {RNA815_14575}
6. MligTC455_30269 148 3.09 Mlig455_050984

Neo: -

Age: -

 2.473 - - - 0.797 0.955 0.721 Mlig455_050984 {REF} {Length: 3262} {Dmel: FBgn0036278, CrzR, Corazonin receptor, [Score=55.5, Expect=1e-09]} {RNA1509_5039} {RNA1310_3442.1} {RNA815_3500.1}
7. MligTC455_45344 111 2.31 Mlig455_062324, Mlig455_062333

Neo: -

Age: -

 1.85 - - - 0.890 0.960 -

Mlig455_062324 {REF} {Length: 1121} {NoTransDecoderORF} {RNA1310_35138}

Mlig455_062333 {REF} {Length: 1771} {NoTransDecoderORF} {RNA1310_35138}
8. MligTC455_36065 889 18.53 Mlig455_014334, Mlig455_020356, Mlig455_031898, Mlig455_036772, Mlig455_060660

Neo: -

Age: -

 1.758 - - - - 0.960 0.798

Mlig455_014334 {REF} {Length: 1229} {Pfam: Integrase core domain [PF00665.28, score=28.6]} {Smed: dd_Smed_v6_11155_0_5, dd_Smed_v6_11155_0_5, [Score=59.3, Expect=7e-11]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}

Mlig455_020356 {REF} {Length: 6131} {Celegans: WBGene00016348, C33E10.6, [RH, Score=286, Expect=1e-84]} {Smed: dd_Smed_v6_9974_1_2, dd_Smed_v6_9974_1_2, [Score=300, Expect=3e-90]} {RNA1509_28643} {RNA1310_576.1} {RNA815_1671.1}

Mlig455_031898 {REF} {Length: 1129} {Pfam: Integrase core domain [PF00665.28, score=21.1]} {Smed: dd_Smed_v6_11155_0_2, dd_Smed_v6_11155_0_2, [Score=54.3, Expect=2e-10]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}

Mlig455_036772 {REF} {Length: 1339} {Pfam: Integrase core domain [PF00665.28, score=34.8]} {Smed: dd_Smed_v6_11155_0_1, dd_Smed_v6_11155_0_1, [Score=57.4, Expect=4e-10]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}

Mlig455_060660 {REF} {Length: 921} {Pfam: Integrase core domain [PF00665.28, score=33.9]} {Smed: dd_Smed_v6_11155_0_6, dd_Smed_v6_11155_0_6, [Score=56.6, Expect=6e-10]} {RNA1509_21400} {RNA1310_6101.1} {RNA815_23595}
9. MligTC455_38739 39 0.81 Mlig455_014528

Neo: -

Age: -

 1.757 - - 0.952 - 0.805 - Mlig455_014528 {REF} {Length: 1250} {NoTransDecoderORF} {RNA1509_13586} {RNA1310_52607} {RNA815_2048.1}
10. MligTC455_28985 114 2.38 Mlig455_058931

Neo: -

Age: -

 1.745 - - - - 0.960 0.785 Mlig455_058931 {REF} {Length: 5896} {RNA1509_20157} {RNA1310_23482} {RNA815_318.1}
11. MligTC455_17819 776 16.16 Mlig455_029976

Neo: -

Age: Down-Up-Down

 GUCA1B 1.726 - - 0.775 - 0.951 - Mlig455_029976 {REF} {Length: 1140} {Pfam: EF hand [PF00036.34, score=74.9]; EF-hand domain pair [PF13499.8, score=71.2]; EF hand [PF13202.8, score=63.7]; EF-hand domain [PF13405.8, score=63.2]; EF-hand domain pair [PF13833.8, score=52.6]} {Human: ENSG00000112599, GUCA1B, guanylate cyclase activator 1B, [Score=69.7, Expect=1e-14]} {Mouse: ENSMUSG00000036438, Calm2, calmodulin 2, [Score=52.0, Expect=8e-09]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=51.6, Expect=2e-08]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=51.6, Expect=2e-08]; ENSMUSG00000028310, Ppp3r2, protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type II), [Score=50.4, Expect=1e-07]; ENSMUSG00000033953, Ppp3r1, protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I), [Score=50.4, Expect=8e-08]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=50.4, Expect=5e-08]} {Celegans: WBGene00003565, ncs-3, Neuronal Calcium Sensor family, [Score=67.8, Expect=3e-14]} {Smed: dd_Smed_v6_14450_0_1, dd_Smed_v6_14450_0_1, [Score=52.0, Expect=1e-08]} {RNA1509_25226} {RNA1310_34058} {RNA815_15719}
12. MligTC455_37130 135 2.81 Mlig455_059474, Mlig455_070000

Neo: -

Age: Down-Up-Up

 CUBN 0.978 - - - - 0.978 -

Mlig455_059474 {REF} {Length: 4668} {Pfam: Protein of unknown function (DUF1104) [PF06518.13, score=25.8]} {RNA1509_40399, RNA1509_51908} {RNA1310_340.1, RNA1509_51908} {RNA1509_51908, RNA815_1857}

Mlig455_070000 {REF} {Length: 2337} {Pfam: CUB domain [PF00431.22, score=107.7]; CUB-like domain [PF02408.22, score=27.1]} {Human: ENSG00000107611, CUBN, cubilin, [Score=67.0, Expect=8e-11]} {Mouse: ENSMUSG00000022098, Bmp1, bone morphogenetic protein 1, [Score=55.8, Expect=1e-07]} {Dmel: FBgn0031879, uif, uninflatable, [Score=60.1, Expect=5e-09]} {Celegans: WBGene00011222, R10H10.3, [Score=51.6, Expect=7e-07]} {Smed: dd_Smed_v6_5652_0_1, dd_Smed_v6_5652_0_1, [Score=56.2, Expect=4e-08]} {RNA1509_23859} {RNA1310_38123} {RNA815_26339.1}
13. MligTC455_30263 126 2.62 Mlig455_003389

Neo: -

Age: -

 0.974 - - - - 0.974 - Mlig455_003389 {REF} {Length: 5048} {NoTransDecoderORF} {RNA1509_31144, RNA1509_45963} {RNA1310_27681, RNA1509_45963} {RNA1509_45963, RNA815_5159.1}
14. MligTC455_12252 153 3.18 Mlig455_007987

Neo: -

Age: -

 0.959 - - - - 0.959 - Mlig455_007987 {REF} {Length: 516} {NoTransDecoderORF} {RNA1509_52260} {RNA1310_51099}
15. MligTC455_27483 115 2.4 Mlig455_038002, Mlig455_060692

Neo: -

Age: -

 0.958 - - - - 0.958 -

Mlig455_038002 {REF} {Length: 1700} {Pfam: Crescentin protein [PF19220.2, score=18.4]} {RNA1509_49894} {RNA1310_436.1} {RNA815_16288}

Mlig455_060692 {REF} {Length: 1705} {Pfam: Crescentin protein [PF19220.2, score=18.0]} {RNA1509_49894} {RNA1310_436.1} {RNA815_16288}
16. MligTC455_07586 302 6.29 Mlig455_059282, Mlig455_065216

Neo: -

Age: -

 CHRNA7 0.956 0.956 - - - - -

Mlig455_059282 {REF} {Length: 3061} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=212.8]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=132.3]; Protein of unknown function (DUF812) [PF05667.13, score=20.1]} {Human: ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=281, Expect=5e-87]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=281, Expect=5e-87]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=277, Expect=1e-85]; ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=275, Expect=3e-85]; ENSG00000101204, CHRNA4, cholinergic receptor nicotinic alpha 4 subunit, [Score=271, Expect=9e-82]; ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=271, Expect=1e-83]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=268, Expect=3e-82]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=281, Expect=2e-87]; ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=276, Expect=1e-85]; ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=272, Expect=2e-84]; ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [Score=268, Expect=2e-82]; ENSMUSG00000027577, Chrna4, cholinergic receptor, nicotinic, alpha polypeptide 4, [Score=268, Expect=1e-80]} {Dmel: FBgn0000039, nAChRalpha2, nicotinic Acetylcholine Receptor alpha2, [Score=294, Expect=1e-91]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=259, Expect=4e-79]} {Smed: dd_Smed_v6_6939_0_3, dd_Smed_v6_6939_0_3, [Score=564, Expect=0.0]} {RNA1509_48605} {RNA1310_10796.1} {RNA815_3826.1}

Mlig455_065216 {REF} {Length: 2934} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=212.9]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=132.4]; Protein of unknown function (DUF812) [PF05667.13, score=21.2]} {Human: ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=283, Expect=9e-88]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=281, Expect=2e-87]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=278, Expect=7e-86]; ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=276, Expect=6e-86]; ENSG00000101204, CHRNA4, cholinergic receptor nicotinic alpha 4 subunit, [Score=271, Expect=7e-82]; ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=271, Expect=8e-84]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=269, Expect=2e-82]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=281, Expect=1e-87]; ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=276, Expect=8e-86]; ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=271, Expect=2e-84]; ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [Score=270, Expect=4e-83]; ENSMUSG00000027577, Chrna4, cholinergic receptor, nicotinic, alpha polypeptide 4, [Score=267, Expect=9e-81]} {Dmel: FBgn0000036, nAChRalpha1, nicotinic Acetylcholine Receptor alpha1, [Score=295, Expect=4e-92]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=260, Expect=8e-80]} {Smed: dd_Smed_v6_6939_0_1, dd_Smed_v6_6939_0_1, [RH, Score=568, Expect=0.0]} {RNA1509_48605} {RNA1310_10796.1} {RNA815_3826.1}
17. MligTC455_24993 233 4.86 Mlig455_050468

Neo: -

Age: Up-Down-Down

 PTPRS 0.955 0.955 - - - - - Mlig455_050468 {REF} {Length: 2099} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=259.3]; Tyrosine phosphatase family [PF13350.8, score=26.7]; Dual specificity phosphatase, catalytic domain [PF00782.22, score=20.1]} {Human: ENSG00000105426, PTPRS, protein tyrosine phosphatase, receptor type S, [Score=499, Expect=3e-164]; ENSG00000153707, PTPRD, protein tyrosine phosphatase, receptor type D, [Score=497, Expect=2e-163]; ENSG00000282932, PTPRD, protein tyrosine phosphatase, receptor type D, [Score=497, Expect=2e-163]; ENSG00000142949, PTPRF, protein tyrosine phosphatase, receptor type F, [Score=494, Expect=1e-163]} {Mouse: ENSMUSG00000028399, Ptprd, protein tyrosine phosphatase, receptor type, D, [Score=500, Expect=7e-167]; ENSMUSG00000013236, Ptprs, protein tyrosine phosphatase, receptor type, S, [Score=493, Expect=2e-162]; ENSMUSG00000033295, Ptprf, protein tyrosine phosphatase, receptor type, F, [Score=491, Expect=9e-163]} {Dmel: FBgn0000464, Lar, Leukocyte-antigen-related-like, [Score=454, Expect=7e-146]} {Celegans: WBGene00004215, ptp-3, Tyrosine-protein phosphatase Lar-like, [Score=318, Expect=9e-100]} {Smed: dd_Smed_v6_9734_0_1, dd_Smed_v6_9734_0_1, [Score=439, Expect=8e-146]} {RNA1509_59220} {RNA1310_403.1} {RNA815_2245.3}
18. MligTC455_51423 3614 75.28 Mlig455_021901

Neo: -

Age: -

Regeneration-downregulated R2: -1.093

Regeneration-depleted R2: -1.093

 CALM2 0.955 - - - 0.955 - - Mlig455_021901 {REF} {Length: 2189} {TRANSSPLICED} {Pfam: EF hand [PF00036.34, score=141.5]; EF-hand domain pair [PF13499.8, score=125.9]; EF-hand domain pair [PF13833.8, score=108.2]; EF-hand domain [PF13405.8, score=98.7]; EF hand [PF13202.8, score=95.3]; EF-hand domain [PF14658.8, score=61.9]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=40.9]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=32.1]; EF-hand domain [PF08976.13, score=28.8]; Uncharacterised protein family (UPF0154) [PF03672.15, score=23.7]; Ca2+ insensitive EF hand [PF08726.12, score=21.4]; Dockerin type I domain [PF00404.20, score=21.1]; Caleosin related protein [PF05042.15, score=18.8]; Repeat of unknown function (DUF1103) [PF06513.13, score=18.5]} {Human: ENSG00000143933, CALM2, calmodulin 2, [RH, Score=295, Expect=2e-103]; ENSG00000198668, CALM1, calmodulin 1, [RH, Score=293, Expect=2e-103]; ENSG00000160014, CALM3, calmodulin 3, [RH, Score=291, Expect=2e-102]} {Mouse: ENSMUSG00000019370, Calm3, calmodulin 3, [RH, Score=291, Expect=1e-102]; ENSMUSG00000036438, Calm2, calmodulin 2, [RH, Score=291, Expect=1e-102]; ENSMUSG00000001175, Calm1, calmodulin 1, [RH, Score=291, Expect=1e-102]} {Dmel: FBgn0000253, Cam, Calmodulin, [RH, Score=294, Expect=4e-104]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [RH, Score=295, Expect=1e-104]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [RH, Score=295, Expect=8e-105]} {RNA1509_10228} {RNA1310_22130} {RNA815_4214.1}
19. MligTC455_24992 222 4.62 Mlig455_040423

Neo: -

Age: Up-Down-Down

 PTPRD 0.954 0.954 - - - - - Mlig455_040423 {REF} {Length: 5511} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=536.0]; Fibronectin type III domain [PF00041.23, score=69.6]; Tyrosine phosphatase family [PF13350.8, score=37.9]; Dual specificity phosphatase, catalytic domain [PF00782.22, score=33.7]; Inositol hexakisphosphate [PF14566.8, score=24.3]} {Human: ENSG00000282932, PTPRD, protein tyrosine phosphatase, receptor type D, [RH, Score=1019, Expect=0.0]; ENSG00000153707, PTPRD, protein tyrosine phosphatase, receptor type D, [RH, Score=1019, Expect=0.0]; ENSG00000105426, PTPRS, protein tyrosine phosphatase, receptor type S, [RH, Score=1010, Expect=0.0]; ENSG00000142949, PTPRF, protein tyrosine phosphatase, receptor type F, [RH, Score=1009, Expect=0.0]} {Mouse: ENSMUSG00000028399, Ptprd, protein tyrosine phosphatase, receptor type, D, [RH, Score=1023, Expect=0.0]; ENSMUSG00000013236, Ptprs, protein tyrosine phosphatase, receptor type, S, [RH, Score=1011, Expect=0.0]; ENSMUSG00000033295, Ptprf, protein tyrosine phosphatase, receptor type, F, [RH, Score=1004, Expect=0.0]} {Dmel: FBgn0000464, Lar, Leukocyte-antigen-related-like, [RH, Score=928, Expect=0.0]} {Celegans: WBGene00004215, ptp-3, Tyrosine-protein phosphatase Lar-like, [RH, Score=723, Expect=0.0]} {Smed: dd_Smed_v6_10176_0_2, dd_Smed_v6_10176_0_2, [RH, Score=962, Expect=0.0]} {RNA1509_45823, RNA1509_59220} {RNA1310_2694.1, RNA1509_45823, RNA1509_59220} {RNA1509_45823, RNA1509_59220, RNA815_2245.1}
20. MligTC455_19252 1355 28.24 Mlig455_054908, Mlig455_065614, Mlig455_065623

Neo: -

Age: Down-Down-Up

Region-enriched R2: 4.927/0.00706

 QPCT 0.951 0.951 - - - - -

Mlig455_054908 {REF} {Length: 1427} {Pfam: Peptidase family M28 [PF04389.19, score=84.4]} {Human: ENSG00000115828, QPCT, glutaminyl-peptide cyclotransferase, [Score=113, Expect=3e-28]} {Mouse: ENSMUSG00000030407, Qpctl, glutaminyl-peptide cyclotransferase-like, [Score=123, Expect=8e-32]} {Dmel: FBgn0052412, QC, Glutaminyl cyclase, [Score=116, Expect=7e-30]} {Celegans: WBGene00010418, H27A22.1, [Score=124, Expect=6e-33]} {Smed: dd_Smed_v6_4861_0_1, dd_Smed_v6_4861_0_1, [Score=118, Expect=1e-30]} {RNA1509_35784} {RNA1310_28475}

Mlig455_065614 {REF} {Length: 1515} {Pfam: Peptidase family M28 [PF04389.19, score=121.0]} {Human: ENSG00000115828, QPCT, glutaminyl-peptide cyclotransferase, [Score=157, Expect=2e-44]} {Mouse: ENSMUSG00000024084, Qpct, glutaminyl-peptide cyclotransferase (glutaminyl cyclase), [Score=162, Expect=2e-46]; ENSMUSG00000030407, Qpctl, glutaminyl-peptide cyclotransferase-like, [Score=161, Expect=6e-46]} {Dmel: FBgn0052412, QC, Glutaminyl cyclase, [Score=158, Expect=2e-45]} {Celegans: WBGene00010418, H27A22.1, [Score=166, Expect=2e-48]} {Smed: dd_Smed_v6_4861_0_1, dd_Smed_v6_4861_0_1, [Score=156, Expect=2e-44]} {RNA1509_35784} {RNA1310_28475, RNA1509_35784}

Mlig455_065623 {REF} {Length: 1295} {Pfam: Peptidase family M28 [PF04389.19, score=121.4]} {Human: ENSG00000115828, QPCT, glutaminyl-peptide cyclotransferase, [Score=158, Expect=6e-45]} {Mouse: ENSMUSG00000030407, Qpctl, glutaminyl-peptide cyclotransferase-like, [Score=162, Expect=2e-46]; ENSMUSG00000024084, Qpct, glutaminyl-peptide cyclotransferase (glutaminyl cyclase), [Score=161, Expect=3e-46]} {Dmel: FBgn0052412, QC, Glutaminyl cyclase, [Score=154, Expect=8e-44]} {Celegans: WBGene00010418, H27A22.1, [Score=163, Expect=2e-47]} {Smed: dd_Smed_v6_4861_0_1, dd_Smed_v6_4861_0_1, [Score=154, Expect=8e-44]} {RNA1509_35784} {RNA1310_28475}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA