TomoSeq data search

Data search

Results for MligTC455_28089

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_28089	22	0.46	Mlig455_016453	Neo: - Age: -	ZNF595	Mlig455_016453 {REF} {Length: 4711} {TRANSSPLICED} {Pfam: Zinc-finger double domain [PF13465.8, score=90.9]; Zinc finger, C2H2 type [PF00096.28, score=74.7]; C2H2-type zinc finger [PF13894.8, score=47.6]; Transcription elongation factor Elf1 like [PF05129.15, score=18.7]} {Human: ENSG00000272602, ZNF595, zinc finger protein 595, [Score=145, Expect=4e-39]; ENSG00000204611, ZNF616, zinc finger protein 616, [Score=144, Expect=1e-37]; ENSG00000267041, ZNF850, zinc finger protein 850, [Score=144, Expect=2e-37]; ENSG00000278318, ZNF229, zinc finger protein 229, [Score=144, Expect=2e-37]; ENSG00000198440, ZNF583, zinc finger protein 583, [Score=143, Expect=1e-37]; ENSG00000198939, ZFP2, ZFP2 zinc finger protein, [Score=141, Expect=2e-37]; ENSG00000187187, ZNF546, zinc finger protein 546, [Score=141, Expect=2e-36]; ENSG00000281526, ZNF546, zinc finger protein 546, [Score=141, Expect=2e-36]; ENSG00000182903, ZNF721, zinc finger protein 721, [Score=140, Expect=4e-36]; ENSG00000198538, ZNF28, zinc finger protein 28, [Score=140, Expect=4e-36]; ENSG00000197050, ZNF420, zinc finger protein 420, [Score=139, Expect=6e-36]; ENSG00000131115, ZNF227, zinc finger protein 227, [Score=139, Expect=1e-35]; ENSG00000197951, ZNF71, zinc finger protein 71, [Score=139, Expect=1e-36]; ENSG00000197566, ZNF624, zinc finger protein 624, [Score=139, Expect=1e-35]; ENSG00000182318, ZSCAN22, zinc finger and SCAN domain containing 22, [Score=139, Expect=2e-36]; ENSG00000181450, ZNF678, zinc finger protein 678, [Score=139, Expect=3e-36]} {Mouse: ENSMUSG00000096916, Zfp850, zinc finger protein 850, [Score=147, Expect=6e-39]; ENSMUSG00000078877, Gm14295, predicted gene 14295, [Score=146, Expect=3e-38]; ENSMUSG00000072763, 5430403G16Rik, RIKEN cDNA 5430403G16 gene, [Score=144, Expect=1e-37]; ENSMUSG00000102030, Gm29106, predicted gene 29106, [Score=144, Expect=1e-37]; ENSMUSG00000078881, Gm14434, predicted gene 14434, [Score=142, Expect=7e-38]; ENSMUSG00000078880, Gm14308, predicted gene 14308, [Score=142, Expect=7e-38]; ENSMUSG00000078886, Gm2026, predicted gene 2026, [Score=142, Expect=7e-38]; ENSMUSG00000094475, Gm11007, predicted gene 11007, [Score=142, Expect=6e-38]; ENSMUSG00000078897, Gm4724, predicted gene 4724, [Score=142, Expect=7e-38]; ENSMUSG00000094932, Gm2007, predicted gene 2007, [Score=142, Expect=6e-38]; ENSMUSG00000055305, Zfp93, zinc finger protein 93, [Score=142, Expect=3e-37]; ENSMUSG00000078899, Gm4631, predicted gene 4631, [Score=142, Expect=6e-38]; ENSMUSG00000069476, Zfp616, zinc finger protein 616, [Score=141, Expect=2e-36]; ENSMUSG00000078878, Gm14305, predicted gene 14305, [Score=140, Expect=3e-37]; ENSMUSG00000063108, Zfp26, zinc finger protein 26, [Score=140, Expect=4e-36]; ENSMUSG00000058883, Zfp708, zinc finger protein 708, [Score=140, Expect=1e-36]} {Dmel: FBgn0001325, Kr, Kruppel, [Score=123, Expect=4e-31]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [Score=120, Expect=3e-31]} {Smed: dd_Smed_v6_36618_0_1, dd_Smed_v6_36618_0_1, [Score=106, Expect=3e-27]} {RNA1509_30169, RNA1509_38205, RNA1509_47022, RNA1509_8819} {RNA1310_8762, RNA1509_38205, RNA1509_47022, RNA1509_8819} {RNA1509_38205, RNA1509_47022, RNA1509_8819, RNA815_3859}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_28089

0.46

Mlig455_016453

Neo: -

Age: -

ZNF595

Mlig455_016453 {REF} {Length: 4711} {TRANSSPLICED} {Pfam: Zinc-finger double domain [PF13465.8, score=90.9]; Zinc finger, C2H2 type [PF00096.28, score=74.7]; C2H2-type zinc finger [PF13894.8, score=47.6]; Transcription elongation factor Elf1 like [PF05129.15, score=18.7]} {Human: ENSG00000272602, ZNF595, zinc finger protein 595, [Score=145, Expect=4e-39]; ENSG00000204611, ZNF616, zinc finger protein 616, [Score=144, Expect=1e-37]; ENSG00000267041, ZNF850, zinc finger protein 850, [Score=144, Expect=2e-37]; ENSG00000278318, ZNF229, zinc finger protein 229, [Score=144, Expect=2e-37]; ENSG00000198440, ZNF583, zinc finger protein 583, [Score=143, Expect=1e-37]; ENSG00000198939, ZFP2, ZFP2 zinc finger protein, [Score=141, Expect=2e-37]; ENSG00000187187, ZNF546, zinc finger protein 546, [Score=141, Expect=2e-36]; ENSG00000281526, ZNF546, zinc finger protein 546, [Score=141, Expect=2e-36]; ENSG00000182903, ZNF721, zinc finger protein 721, [Score=140, Expect=4e-36]; ENSG00000198538, ZNF28, zinc finger protein 28, [Score=140, Expect=4e-36]; ENSG00000197050, ZNF420, zinc finger protein 420, [Score=139, Expect=6e-36]; ENSG00000131115, ZNF227, zinc finger protein 227, [Score=139, Expect=1e-35]; ENSG00000197951, ZNF71, zinc finger protein 71, [Score=139, Expect=1e-36]; ENSG00000197566, ZNF624, zinc finger protein 624, [Score=139, Expect=1e-35]; ENSG00000182318, ZSCAN22, zinc finger and SCAN domain containing 22, [Score=139, Expect=2e-36]; ENSG00000181450, ZNF678, zinc finger protein 678, [Score=139, Expect=3e-36]} {Mouse: ENSMUSG00000096916, Zfp850, zinc finger protein 850, [Score=147, Expect=6e-39]; ENSMUSG00000078877, Gm14295, predicted gene 14295, [Score=146, Expect=3e-38]; ENSMUSG00000072763, 5430403G16Rik, RIKEN cDNA 5430403G16 gene, [Score=144, Expect=1e-37]; ENSMUSG00000102030, Gm29106, predicted gene 29106, [Score=144, Expect=1e-37]; ENSMUSG00000078881, Gm14434, predicted gene 14434, [Score=142, Expect=7e-38]; ENSMUSG00000078880, Gm14308, predicted gene 14308, [Score=142, Expect=7e-38]; ENSMUSG00000078886, Gm2026, predicted gene 2026, [Score=142, Expect=7e-38]; ENSMUSG00000094475, Gm11007, predicted gene 11007, [Score=142, Expect=6e-38]; ENSMUSG00000078897, Gm4724, predicted gene 4724, [Score=142, Expect=7e-38]; ENSMUSG00000094932, Gm2007, predicted gene 2007, [Score=142, Expect=6e-38]; ENSMUSG00000055305, Zfp93, zinc finger protein 93, [Score=142, Expect=3e-37]; ENSMUSG00000078899, Gm4631, predicted gene 4631, [Score=142, Expect=6e-38]; ENSMUSG00000069476, Zfp616, zinc finger protein 616, [Score=141, Expect=2e-36]; ENSMUSG00000078878, Gm14305, predicted gene 14305, [Score=140, Expect=3e-37]; ENSMUSG00000063108, Zfp26, zinc finger protein 26, [Score=140, Expect=4e-36]; ENSMUSG00000058883, Zfp708, zinc finger protein 708, [Score=140, Expect=1e-36]} {Dmel: FBgn0001325, Kr, Kruppel, [Score=123, Expect=4e-31]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [Score=120, Expect=3e-31]} {Smed: dd_Smed_v6_36618_0_1, dd_Smed_v6_36618_0_1, [Score=106, Expect=3e-27]} {RNA1509_30169, RNA1509_38205, RNA1509_47022, RNA1509_8819} {RNA1310_8762, RNA1509_38205, RNA1509_47022, RNA1509_8819} {RNA1509_38205, RNA1509_47022, RNA1509_8819, RNA815_3859}

Cumulative graph for MligTC455_28089

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	1.456	1.06	0.99989	1.00000
RegionR2	-1.951	1.06	0.99975	1.00000
RegionR3	-1.421	1.06	0.99974	1.00000
RegionR4	2.66	1.06	0.05711	0.21097
RegionR5	2.169	1.06	0.04274	0.16719
RegionR6	-1.625	1.06	0.99981	1.00000
RegionR7	-0.833	1.06	0.99985	1.00000
RegionR8	-0.453	1.06	0.99983	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-2.217	1.06	0.99996	1.00000
RegenerationR2	2.922	1.06	0.04142	0.33601
RegenerationR3	2.652	1.06	0.13327	0.55689
RegenerationR4	0.816	1.06	0.66724	0.94131
RegenerationR5	0.295	1.06	0.90373	1.00000
RegenerationR6	3.933	1.06	0.03662	0.23900
RegenerationBL	2.6	1.06	0.20150	0.54053
RegenerationTP	2.168	1.06	0.42946	0.85217

Genes with expression patterns similar to MligTC455_28089

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_28089	22	0.46	Mlig455_016453	Neo: - Age: -	ZNF595	3	-	-	-	1.000	1.000	1.000	Mlig455_016453 {REF} {Length: 4711} {TRANSSPLICED} {Pfam: Zinc-finger double domain [PF13465.8, score=90.9]; Zinc finger, C2H2 type [PF00096.28, score=74.7]; C2H2-type zinc finger [PF13894.8, score=47.6]; Transcription elongation factor Elf1 like [PF05129.15, score=18.7]} {Human: ENSG00000272602, ZNF595, zinc finger protein 595, [Score=145, Expect=4e-39]; ENSG00000204611, ZNF616, zinc finger protein 616, [Score=144, Expect=1e-37]; ENSG00000267041, ZNF850, zinc finger protein 850, [Score=144, Expect=2e-37]; ENSG00000278318, ZNF229, zinc finger protein 229, [Score=144, Expect=2e-37]; ENSG00000198440, ZNF583, zinc finger protein 583, [Score=143, Expect=1e-37]; ENSG00000198939, ZFP2, ZFP2 zinc finger protein, [Score=141, Expect=2e-37]; ENSG00000187187, ZNF546, zinc finger protein 546, [Score=141, Expect=2e-36]; ENSG00000281526, ZNF546, zinc finger protein 546, [Score=141, Expect=2e-36]; ENSG00000182903, ZNF721, zinc finger protein 721, [Score=140, Expect=4e-36]; ENSG00000198538, ZNF28, zinc finger protein 28, [Score=140, Expect=4e-36]; ENSG00000197050, ZNF420, zinc finger protein 420, [Score=139, Expect=6e-36]; ENSG00000131115, ZNF227, zinc finger protein 227, [Score=139, Expect=1e-35]; ENSG00000197951, ZNF71, zinc finger protein 71, [Score=139, Expect=1e-36]; ENSG00000197566, ZNF624, zinc finger protein 624, [Score=139, Expect=1e-35]; ENSG00000182318, ZSCAN22, zinc finger and SCAN domain containing 22, [Score=139, Expect=2e-36]; ENSG00000181450, ZNF678, zinc finger protein 678, [Score=139, Expect=3e-36]} {Mouse: ENSMUSG00000096916, Zfp850, zinc finger protein 850, [Score=147, Expect=6e-39]; ENSMUSG00000078877, Gm14295, predicted gene 14295, [Score=146, Expect=3e-38]; ENSMUSG00000072763, 5430403G16Rik, RIKEN cDNA 5430403G16 gene, [Score=144, Expect=1e-37]; ENSMUSG00000102030, Gm29106, predicted gene 29106, [Score=144, Expect=1e-37]; ENSMUSG00000078881, Gm14434, predicted gene 14434, [Score=142, Expect=7e-38]; ENSMUSG00000078880, Gm14308, predicted gene 14308, [Score=142, Expect=7e-38]; ENSMUSG00000078886, Gm2026, predicted gene 2026, [Score=142, Expect=7e-38]; ENSMUSG00000094475, Gm11007, predicted gene 11007, [Score=142, Expect=6e-38]; ENSMUSG00000078897, Gm4724, predicted gene 4724, [Score=142, Expect=7e-38]; ENSMUSG00000094932, Gm2007, predicted gene 2007, [Score=142, Expect=6e-38]; ENSMUSG00000055305, Zfp93, zinc finger protein 93, [Score=142, Expect=3e-37]; ENSMUSG00000078899, Gm4631, predicted gene 4631, [Score=142, Expect=6e-38]; ENSMUSG00000069476, Zfp616, zinc finger protein 616, [Score=141, Expect=2e-36]; ENSMUSG00000078878, Gm14305, predicted gene 14305, [Score=140, Expect=3e-37]; ENSMUSG00000063108, Zfp26, zinc finger protein 26, [Score=140, Expect=4e-36]; ENSMUSG00000058883, Zfp708, zinc finger protein 708, [Score=140, Expect=1e-36]} {Dmel: FBgn0001325, Kr, Kruppel, [Score=123, Expect=4e-31]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [Score=120, Expect=3e-31]} {Smed: dd_Smed_v6_36618_0_1, dd_Smed_v6_36618_0_1, [Score=106, Expect=3e-27]} {RNA1509_30169, RNA1509_38205, RNA1509_47022, RNA1509_8819} {RNA1310_8762, RNA1509_38205, RNA1509_47022, RNA1509_8819} {RNA1509_38205, RNA1509_47022, RNA1509_8819, RNA815_3859}
2.	MligTC455_39448	66	1.38	Mlig455_038809	Neo: - Age: -		0.978	-	-	-	-	0.978	-	Mlig455_038809 {REF} {Length: 2247} {TRANSSPLICED} {RNA1509_38973} {RNA1310_19152.1, RNA1509_38973} {RNA1509_38973, RNA815_3028.1}
3.	MligTC455_01032	21	0.43	Mlig455_006069	Neo: - Age: -		0.974	-	-	-	0.974	-	-	Mlig455_006069 {REF} {Length: 2849} {RNA1509_41972} {RNA1310_1374.1} {RNA815_21848}
4.	MligTC455_23355	380	7.91	Mlig455_047433	Neo: Irradiation Age: Up-Up-Down Region-enriched R5: 1.922/0.03999 Regeneration-upregulated BL: 4.169 Regeneration-enriched BL: 4.169	GEMIN5	0.971	-	-	-	0.971	-	-	Mlig455_047433 {REF} {Length: 4789} {Pfam: WD domain, G-beta repeat [PF00400.34, score=57.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=33.3]} {Human: ENSG00000082516, GEMIN5, gem nuclear organelle associated protein 5, [RH, Score=284, Expect=2e-77]} {Mouse: ENSMUSG00000037275, Gemin5, gem nuclear organelle associated protein 5, [RH, Score=290, Expect=1e-79]} {Dmel: FBgn0033526, Caf1-105, Chromatin assembly factor 1, p105 subunit, [Score=62.0, Expect=4e-09]} {Celegans: WBGene00021074, W07E6.2, [Score=56.6, Expect=3e-09]} {Smed: dd_Smed_v6_3438_0_1, dd_Smed_v6_3438_0_1, [Score=57.4, Expect=4e-08]} {RNA1509_10687} {RNA1310_1434.1} {RNA815_13032}
5.	MligTC455_47336	188	3.92	Mlig455_012695	Neo: Irradiation Age: -	PPIL4	0.97	-	-	-	0.970	-	-	Mlig455_012695 {REF} {Length: 7286} {TRANSSPLICED} {Pfam: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD [PF00160.23, score=127.3]; DEAD/DEAH box helicase [PF00270.31, score=67.8]; Helicase conserved C-terminal domain [PF00271.33, score=65.7]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=53.4]} {Human: ENSG00000131013, PPIL4, peptidylprolyl isomerase like 4, [RH, Score=432, Expect=3e-140]} {Mouse: ENSMUSG00000015757, Ppil4, peptidylprolyl isomerase (cyclophilin)-like 4, [RH, Score=431, Expect=3e-140]} {Dmel: FBgn0027617, CG5808, [Score=431, Expect=7e-138]} {Celegans: WBGene00000890, sig-7, Peptidyl-prolyl cis-trans isomerase sig-7, [RH, Score=429, Expect=1e-140]} {Smed: dd_Smed_v6_5960_0_1, dd_Smed_v6_5960_0_1, [RH, Score=473, Expect=8e-157]} {RNA1509_23861} {RNA1310_14777, RNA1509_23861} {RNA1509_23861, RNA815_14242}
6.	MligTC455_51479	285	5.94	Mlig455_015075	Neo: - Age: -		0.969	-	-	-	0.969	-	-	Mlig455_015075 {REF} {Length: 2603} {NoTransDecoderORF} {RNA1509_22350, RNA1509_37697} {RNA1310_36377, RNA1509_22350, RNA1509_37697} {RNA1509_22350, RNA1509_37697, RNA815_27320}
7.	MligTC455_34507	122	2.55	Mlig455_056674	Neo: - Age: -	SLBP	0.964	-	-	-	0.964	-	-	Mlig455_056674 {REF} {Length: 2076} {TRANSSPLICED} {Pfam: Histone RNA hairpin-binding protein RNA-binding domain [PF15247.8, score=82.7]} {Human: ENSG00000163950, SLBP, stem-loop binding protein, [RH, Score=86.7, Expect=4e-19]} {Mouse: ENSMUSG00000004642, Slbp, stem-loop binding protein, [RH, Score=86.3, Expect=1e-18]} {Dmel: FBgn0041186, Slbp, Stem-loop binding protein, [RH, Score=77.0, Expect=1e-15]} {Celegans: WBGene00000411, cdl-1, Histone RNA hairpin-binding protein, [RH, Score=67.8, Expect=2e-12]} {Smed: dd_Smed_v6_9628_0_1, dd_Smed_v6_9628_0_1, [RH, Score=100, Expect=4e-24]} {RNA1509_9558} {RNA1310_22526.2, RNA1509_9558} {RNA1509_9558, RNA815_16079}
8.	MligTC455_12635	46	0.96	Mlig455_035482	Neo: - Age: -		0.961	-	-	-	0.961	-	-	Mlig455_035482 {REF} {Length: 1106} {NoTransDecoderORF} {RNA1509_12003} {RNA1310_15400}