Data search
Results for MligTC455_47336
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_47336 | 188 | 3.92 | Mlig455_012695 | Neo: Irradiation Age: - |
PPIL4 | Mlig455_012695 {REF} {Length: 7286} {TRANSSPLICED} {Pfam: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD [PF00160.23, score=127.3]; DEAD/DEAH box helicase [PF00270.31, score=67.8]; Helicase conserved C-terminal domain [PF00271.33, score=65.7]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=53.4]} {Human: ENSG00000131013, PPIL4, peptidylprolyl isomerase like 4, [RH, Score=432, Expect=3e-140]} {Mouse: ENSMUSG00000015757, Ppil4, peptidylprolyl isomerase (cyclophilin)-like 4, [RH, Score=431, Expect=3e-140]} {Dmel: FBgn0027617, CG5808, [Score=431, Expect=7e-138]} {Celegans: WBGene00000890, sig-7, Peptidyl-prolyl cis-trans isomerase sig-7, [RH, Score=429, Expect=1e-140]} {Smed: dd_Smed_v6_5960_0_1, dd_Smed_v6_5960_0_1, [RH, Score=473, Expect=8e-157]} {RNA1509_23861} {RNA1310_14777, RNA1509_23861} {RNA1509_23861, RNA815_14242} |
Cumulative graph for MligTC455_47336
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.874 | 2.742 | 0.59170 | 1.00000 | |
| RegionR2 | 0.941 | 2.742 | 0.24880 | 0.62660 | |
| RegionR3 | -0.921 | 2.742 | 0.14173 | 0.64236 | |
| RegionR4 | -0.888 | 2.742 | 0.25294 | 0.55319 | |
| RegionR5 | 0.848 | 2.742 | 0.07453 | 0.24903 | |
| RegionR6 | 0.322 | 2.742 | 0.57453 | 1.00000 | |
| RegionR7 | 0.426 | 2.742 | 0.61410 | 1.00000 | |
| RegionR8 | 0.146 | 2.742 | 0.88914 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -2.63 | 2.742 | 0.67865 | 1.00000 | |
| RegenerationR2 | 0.449 | 2.742 | 0.54055 | 0.88835 | |
| RegenerationR3 | 2.467 | 2.742 | 0.00085 | 0.04506 | |
| RegenerationR4 | 0.832 | 2.742 | 0.26614 | 0.71365 | |
| RegenerationR5 | 0.394 | 2.742 | 0.46873 | 0.84132 | |
| RegenerationR6 | 1.107 | 2.742 | 0.13570 | 0.45199 | |
| RegenerationBL | 0.876 | 2.742 | 0.41857 | 0.78706 | |
| RegenerationTP | 1.614 | 2.742 | 0.08594 | 0.46347 |
Genes with expression patterns similar to MligTC455_47336
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_47336 | 188 | 3.92 | Mlig455_012695 | Neo: Irradiation Age: - |
PPIL4 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_012695 {REF} {Length: 7286} {TRANSSPLICED} {Pfam: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD [PF00160.23, score=127.3]; DEAD/DEAH box helicase [PF00270.31, score=67.8]; Helicase conserved C-terminal domain [PF00271.33, score=65.7]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=53.4]} {Human: ENSG00000131013, PPIL4, peptidylprolyl isomerase like 4, [RH, Score=432, Expect=3e-140]} {Mouse: ENSMUSG00000015757, Ppil4, peptidylprolyl isomerase (cyclophilin)-like 4, [RH, Score=431, Expect=3e-140]} {Dmel: FBgn0027617, CG5808, [Score=431, Expect=7e-138]} {Celegans: WBGene00000890, sig-7, Peptidyl-prolyl cis-trans isomerase sig-7, [RH, Score=429, Expect=1e-140]} {Smed: dd_Smed_v6_5960_0_1, dd_Smed_v6_5960_0_1, [RH, Score=473, Expect=8e-157]} {RNA1509_23861} {RNA1310_14777, RNA1509_23861} {RNA1509_23861, RNA815_14242} |
| 2. | MligTC455_19226 | 225 | 4.7 | Mlig455_044480 | Neo: - Age: - |
SMARCC2 | 2.455 | 0.795 | - | 0.958 | 0.702 | - | - | Mlig455_044480 {REF} {Length: 4043} {Pfam: SWIRM domain [PF04433.19, score=71.7]; SWIRM-associated region 1 [PF16495.7, score=49.2]; Myb-like DNA-binding domain [PF00249.33, score=40.4]; Myb-like DNA-binding domain [PF13921.8, score=19.6]} {Human: ENSG00000139613, SMARCC2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, [Score=193, Expect=3e-50]} {Mouse: ENSMUSG00000025369, Smarcc2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2, [Score=192, Expect=5e-50]; ENSMUSG00000032481, Smarcc1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1, [Score=183, Expect=4e-47]} {Dmel: FBgn0002783, mor, moira, [Score=176, Expect=5e-45]} {Celegans: WBGene00004203, swsn-1, SWI/SNF nucleosome remodeling complex component; SWI3-like protein, [Score=224, Expect=6e-62]} {Smed: dd_Smed_v6_1804_0_1, dd_Smed_v6_1804_0_1, [Score=193, Expect=1e-50]} {RNA1509_21623} {RNA1310_9539.1} {RNA815_24164} |
| 3. | MligTC455_51479 | 285 | 5.94 | Mlig455_015075 | Neo: - Age: - |
1.759 | 0.798 | - | - | 0.961 | - | - | Mlig455_015075 {REF} {Length: 2603} {NoTransDecoderORF} {RNA1509_22350, RNA1509_37697} {RNA1310_36377, RNA1509_22350, RNA1509_37697} {RNA1509_22350, RNA1509_37697, RNA815_27320} | |
| 4. | MligTC455_01032 | 21 | 0.43 | Mlig455_006069 | Neo: - Age: - |
0.995 | - | - | - | 0.995 | - | - | Mlig455_006069 {REF} {Length: 2849} {RNA1509_41972} {RNA1310_1374.1} {RNA815_21848} | |
| 5. | MligTC455_22066 | 131 | 2.72 | Mlig455_004242, Mlig455_061674 | Neo: - Age: - |
0.976 | - | - | 0.976 | - | - | - | Mlig455_004242 {REF} {Length: 340} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_44182} {RNA1310_9137.1} {RNA815_26754.1} Mlig455_061674 {REF} {Length: 698} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_48080} {RNA1310_52699} {RNA815_26754.1} |
|
| 6. | MligTC455_11485 | 67 | 1.39 | Mlig455_071010 | Neo: - Age: - |
0.974 | - | - | - | 0.974 | - | - | Mlig455_071010 {REF} {Length: 1261} {NoTransDecoderORF} {RNA1509_50390} {RNA1310_20894} {RNA815_18359} | |
| 7. | MligTC455_17936 | 83 | 1.72 | Mlig455_015624 | Neo: - Age: - |
0.972 | - | - | 0.972 | - | - | - | Mlig455_015624 {REF} {Length: 700} {RNA1509_39987} {RNA1310_11976} {RNA815_1768.1} | |
| 8. | MligTC455_28089 | 22 | 0.46 | Mlig455_016453 | Neo: - Age: - |
ZNF595 | 0.97 | - | - | - | 0.970 | - | - | Mlig455_016453 {REF} {Length: 4711} {TRANSSPLICED} {Pfam: Zinc-finger double domain [PF13465.8, score=90.9]; Zinc finger, C2H2 type [PF00096.28, score=74.7]; C2H2-type zinc finger [PF13894.8, score=47.6]; Transcription elongation factor Elf1 like [PF05129.15, score=18.7]} {Human: ENSG00000272602, ZNF595, zinc finger protein 595, [Score=145, Expect=4e-39]; ENSG00000204611, ZNF616, zinc finger protein 616, [Score=144, Expect=1e-37]; ENSG00000267041, ZNF850, zinc finger protein 850, [Score=144, Expect=2e-37]; ENSG00000278318, ZNF229, zinc finger protein 229, [Score=144, Expect=2e-37]; ENSG00000198440, ZNF583, zinc finger protein 583, [Score=143, Expect=1e-37]; ENSG00000198939, ZFP2, ZFP2 zinc finger protein, [Score=141, Expect=2e-37]; ENSG00000187187, ZNF546, zinc finger protein 546, [Score=141, Expect=2e-36]; ENSG00000281526, ZNF546, zinc finger protein 546, [Score=141, Expect=2e-36]; ENSG00000182903, ZNF721, zinc finger protein 721, [Score=140, Expect=4e-36]; ENSG00000198538, ZNF28, zinc finger protein 28, [Score=140, Expect=4e-36]; ENSG00000197050, ZNF420, zinc finger protein 420, [Score=139, Expect=6e-36]; ENSG00000131115, ZNF227, zinc finger protein 227, [Score=139, Expect=1e-35]; ENSG00000197951, ZNF71, zinc finger protein 71, [Score=139, Expect=1e-36]; ENSG00000197566, ZNF624, zinc finger protein 624, [Score=139, Expect=1e-35]; ENSG00000182318, ZSCAN22, zinc finger and SCAN domain containing 22, [Score=139, Expect=2e-36]; ENSG00000181450, ZNF678, zinc finger protein 678, [Score=139, Expect=3e-36]} {Mouse: ENSMUSG00000096916, Zfp850, zinc finger protein 850, [Score=147, Expect=6e-39]; ENSMUSG00000078877, Gm14295, predicted gene 14295, [Score=146, Expect=3e-38]; ENSMUSG00000072763, 5430403G16Rik, RIKEN cDNA 5430403G16 gene, [Score=144, Expect=1e-37]; ENSMUSG00000102030, Gm29106, predicted gene 29106, [Score=144, Expect=1e-37]; ENSMUSG00000078881, Gm14434, predicted gene 14434, [Score=142, Expect=7e-38]; ENSMUSG00000078880, Gm14308, predicted gene 14308, [Score=142, Expect=7e-38]; ENSMUSG00000078886, Gm2026, predicted gene 2026, [Score=142, Expect=7e-38]; ENSMUSG00000094475, Gm11007, predicted gene 11007, [Score=142, Expect=6e-38]; ENSMUSG00000078897, Gm4724, predicted gene 4724, [Score=142, Expect=7e-38]; ENSMUSG00000094932, Gm2007, predicted gene 2007, [Score=142, Expect=6e-38]; ENSMUSG00000055305, Zfp93, zinc finger protein 93, [Score=142, Expect=3e-37]; ENSMUSG00000078899, Gm4631, predicted gene 4631, [Score=142, Expect=6e-38]; ENSMUSG00000069476, Zfp616, zinc finger protein 616, [Score=141, Expect=2e-36]; ENSMUSG00000078878, Gm14305, predicted gene 14305, [Score=140, Expect=3e-37]; ENSMUSG00000063108, Zfp26, zinc finger protein 26, [Score=140, Expect=4e-36]; ENSMUSG00000058883, Zfp708, zinc finger protein 708, [Score=140, Expect=1e-36]} {Dmel: FBgn0001325, Kr, Kruppel, [Score=123, Expect=4e-31]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [Score=120, Expect=3e-31]} {Smed: dd_Smed_v6_36618_0_1, dd_Smed_v6_36618_0_1, [Score=106, Expect=3e-27]} {RNA1509_30169, RNA1509_38205, RNA1509_47022, RNA1509_8819} {RNA1310_8762, RNA1509_38205, RNA1509_47022, RNA1509_8819} {RNA1509_38205, RNA1509_47022, RNA1509_8819, RNA815_3859} |
| 9. | MligTC455_47004 | 371 | 7.72 | Mlig455_007268 | Neo: - Age: Down-Up-Up |
OGFOD1 | 0.961 | - | - | - | 0.961 | - | - | Mlig455_007268 {REF} {Length: 1419} {Pfam: Oxoglutarate and iron-dependent oxygenase degradation C-term [PF10637.11, score=46.5]} {Human: ENSG00000087263, OGFOD1, 2-oxoglutarate and iron dependent oxygenase domain containing 1, [Score=86.3, Expect=5e-19]} {Mouse: ENSMUSG00000033009, Ogfod1, 2-oxoglutarate and iron-dependent oxygenase domain containing 1, [Score=85.5, Expect=6e-19]} {RNA1509_32662, RNA1509_50798} {RNA1310_19206, RNA1509_32662, RNA1509_50798} {RNA1509_32662, RNA1509_50798, RNA815_18604} |
| 10. | MligTC455_18440 | 34 | 0.72 | Mlig455_020380 | Neo: - |
0.957 | - | - | - | 0.957 | - | - | Mlig455_020380 {REF} {Length: 1793} {Pfam: N-terminal domain on NACHT_NTPase and P-loop NTPases [PF17107.7, score=19.3]} {RNA1310_98420.1} {RNA815_27771} | |
| 11. | MligTC455_32192 | 33 | 0.7 | Mlig455_005706 | Neo: - Age: logFC(26M/2M)=0.465 |
0.957 | - | - | - | 0.957 | - | - | Mlig455_005706 {REF} {Length: 1675} {TRANSSPLICED} {Pfam: Porphyromonas-type peptidyl-arginine deiminase [PF04371.17, score=74.0]} {RNA1509_24742} {RNA1310_26295} {RNA815_29609} | |
| 12. | MligTC455_09216 | 96 | 2.01 | Mlig455_031519, Mlig455_035131, Mlig455_035136 | Neo: - Age: - |
ELP3 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_031519 {REF} {Length: 1005} {TRANSSPLICED} {Human: ENSG00000134014, ELP3, elongator acetyltransferase complex subunit 3, [Score=248, Expect=7e-78]} {Mouse: ENSMUSG00000022031, Elp3, elongator acetyltransferase complex subunit 3, [Score=246, Expect=3e-77]} {Dmel: FBgn0031604, Elp3, Elongator complex protein 3, [Score=233, Expect=3e-72]} {Celegans: WBGene00014123, elpc-3, Probable elongator complex protein 3, [Score=251, Expect=3e-79]} {Smed: dd_Smed_v6_3310_0_1, dd_Smed_v6_3310_0_1, [Score=232, Expect=4e-72]} {RNA1509_12612} {RNA1310_65720} {RNA815_5388} Mlig455_035131 {REF} {Length: 1932} {TRANSSPLICED} {Pfam: Radical_SAM C-terminal domain [PF16199.7, score=116.2]; Radical SAM superfamily [PF04055.23, score=79.7]; Acetyltransferase (GNAT) family [PF00583.27, score=37.3]; Acetyltransferase (GNAT) domain [PF13673.9, score=22.7]} {Human: ENSG00000134014, ELP3, elongator acetyltransferase complex subunit 3, [RH, Score=919, Expect=0.0]} {Mouse: ENSMUSG00000022031, Elp3, elongator acetyltransferase complex subunit 3, [RH, Score=910, Expect=0.0]} {Dmel: FBgn0031604, Elp3, Elongator complex protein 3, [RH, Score=909, Expect=0.0]} {Celegans: WBGene00014123, elpc-3, Probable elongator complex protein 3, [RH, Score=891, Expect=0.0]} {Smed: dd_Smed_v6_3310_0_1, dd_Smed_v6_3310_0_1, [RH, Score=897, Expect=0.0]} {RNA1509_12612, RNA1509_20617, RNA1509_59978} {RNA1310_14491, RNA1509_20617, RNA1509_59978} {RNA1509_20617, RNA1509_59978, RNA815_5388} Mlig455_035136 {REF} {Length: 2746} {TRANSSPLICED} {RNA1509_17690} {RNA1310_14491} {RNA815_5388} |
| 13. | MligTC455_17106 | 164 | 3.43 | Mlig455_045134 | Neo: - Age: - |
RAPGEF1 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_045134 {REF} {Length: 4921} {Pfam: RasGEF domain [PF00617.21, score=83.9]; Domain of unknown function (DUF4371) [PF14291.8, score=59.6]} {Human: ENSG00000107263, RAPGEF1, Rap guanine nucleotide exchange factor 1, [RH, Score=187, Expect=2e-47]} {Mouse: ENSMUSG00000039844, Rapgef1, Rap guanine nucleotide exchange factor (GEF) 1, [RH, Score=188, Expect=9e-48]} {Dmel: FBgn0259228, C3G, C3G guanyl-nucleotide exchange factor, [RH, Score=166, Expect=7e-41]} {Celegans: WBGene00021320, Y34B4A.4, [RH, Score=174, Expect=2e-44]} {Smed: dd_Smed_v6_11351_0_1, dd_Smed_v6_11351_0_1, [RH, Score=130, Expect=2e-30]} {RNA1509_14166} {RNA1310_2752.1} {RNA815_12010.1} |
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