TomoSeq data search

Data search

Results for MligTC455_28097

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_28097

225

4.68

Mlig455_002686

Neo: -

Age: logFC(26M/2M)=0.886

PDZRN4

Mlig455_002686 {REF} {Length: 4651} {Pfam: PDZ domain [PF00595.26, score=58.3]; PDZ domain [PF17820.3, score=44.7]; PDZ domain [PF13180.8, score=25.9]} {Human: ENSG00000165966, PDZRN4, PDZ domain containing ring finger 4, [Score=94.0, Expect=2e-19]} {Mouse: ENSMUSG00000036218, Pdzrn4, PDZ domain containing RING finger 4, [Score=89.7, Expect=2e-18]} {Dmel: FBgn0024728, Slip1, [Score=60.8, Expect=2e-09]} {Celegans: WBGene00016846, C50F7.6, [Score=69.7, Expect=9e-13]} {Smed: dd_Smed_v6_14596_0_1, dd_Smed_v6_14596_0_1, [Score=120, Expect=3e-29]} {RNA1509_34490} {RNA1310_18731, RNA1509_34490} {RNA1509_34490, RNA815_18065}

Cumulative graph for MligTC455_28097

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-6.597	2.819	0.08501	0.63401
RegionR2	1.269	2.819	0.19982	0.56032
RegionR3	0.788	2.819	0.37613	0.90928
RegionR4	-0.362	2.819	0.93822	1.00000
RegionR5	0.073	2.819	0.82360	1.00000
RegionR6	0.579	2.819	0.53733	1.00000
RegionR7	1.995	2.819	0.01877	0.25262
RegionR8	2.254	2.819	0.01873	0.26581

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.206	2.819	0.99986	1.00000
RegenerationR2	0.03	2.819	0.95769	1.00000
RegenerationR3	0.908	2.819	0.15261	0.58232
RegenerationR4	1.115	2.819	0.09032	0.47006
RegenerationR5	1.555	2.819	0.00691	0.15159
RegenerationR6	1.289	2.819	0.04406	0.26239
RegenerationBL	-1.728	2.819	0.08219	0.33533
RegenerationTP	-1.592	2.819	0.07267	0.43185

Genes with expression patterns similar to MligTC455_28097

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_28097	225	4.68	Mlig455_002686	Neo: - Age: logFC(26M/2M)=0.886	PDZRN4	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_002686 {REF} {Length: 4651} {Pfam: PDZ domain [PF00595.26, score=58.3]; PDZ domain [PF17820.3, score=44.7]; PDZ domain [PF13180.8, score=25.9]} {Human: ENSG00000165966, PDZRN4, PDZ domain containing ring finger 4, [Score=94.0, Expect=2e-19]} {Mouse: ENSMUSG00000036218, Pdzrn4, PDZ domain containing RING finger 4, [Score=89.7, Expect=2e-18]} {Dmel: FBgn0024728, Slip1, [Score=60.8, Expect=2e-09]} {Celegans: WBGene00016846, C50F7.6, [Score=69.7, Expect=9e-13]} {Smed: dd_Smed_v6_14596_0_1, dd_Smed_v6_14596_0_1, [Score=120, Expect=3e-29]} {RNA1509_34490} {RNA1310_18731, RNA1509_34490} {RNA1509_34490, RNA815_18065}
2.	MligTC455_51323	114	2.37	Mlig455_036899	Neo: - Age: - Region-enriched R5: 2.522/0.00479		0.972	-	-	-	-	-	0.972	Mlig455_036899 {REF} {Length: 2524} {TRANSSPLICED} {Pfam: Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8 [PF15299.8, score=18.6]} {RNA1310_11295.1} {RNA815_14627}
3.	MligTC455_23509	171	3.57	Mlig455_050440	Neo: - Age: -		0.964	-	-	-	-	-	0.964	Mlig455_050440 {REF} {Length: 4626} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=22.2]} {RNA1509_25100, RNA1509_54444} {RNA1310_6777.1, RNA1509_25100, RNA1509_54444} {RNA1509_25100, RNA1509_54444, RNA815_15707}
4.	MligTC455_42570	2049	42.69	Mlig455_053258, Mlig455_065035	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.321		0.953	0.953	-	-	-	-	-	Mlig455_053258 {REF} {Length: 1743} {Pfam: EF-hand domain pair [PF13499.8, score=31.4]; EF hand [PF00036.34, score=24.3]; EF hand [PF13202.8, score=19.7]; EF-hand domain [PF13405.8, score=19.2]} {Smed: dd_Smed_v6_9661_0_1, dd_Smed_v6_9661_0_1, [Score=63.9, Expect=2e-12]} {RNA1509_25077} {RNA1310_19802} {RNA815_7187.1} Mlig455_065035 {REF} {Length: 1711} {Pfam: EF-hand domain pair [PF13499.8, score=31.4]; EF hand [PF00036.34, score=24.1]; EF hand [PF13202.8, score=19.3]; EF-hand domain [PF13405.8, score=18.9]} {Smed: dd_Smed_v6_9661_0_1, dd_Smed_v6_9661_0_1, [Score=62.8, Expect=7e-12]} {RNA1509_25077, RNA1509_34131, RNA1509_57236} {RNA1310_19802, RNA1509_34131, RNA1509_57236} {RNA1509_34131, RNA1509_57236, RNA815_7187.1}
5.	MligTC455_31539	62	1.28	Mlig455_068584	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.571	KIDINS220	0.95	-	-	0.950	-	-	-	Mlig455_068584 {REF} {Length: 4294} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=85.4]; Ankyrin repeats (many copies) [PF13637.8, score=56.6]; Ankyrin repeats (many copies) [PF13857.8, score=49.0]; Mab-21 protein [PF03281.16, score=40.8]; Ankyrin repeat [PF00023.32, score=32.6]; Ankyrin repeat [PF13606.8, score=31.2]} {Human: ENSG00000134313, KIDINS220, kinase D interacting substrate 220, [Score=82.8, Expect=4e-15]; ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=79.0, Expect=6e-14]} {Mouse: ENSMUSG00000036333, Kidins220, kinase D-interacting substrate 220, [Score=78.6, Expect=6e-14]; ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=77.0, Expect=2e-13]; ENSMUSG00000031529, Tnks, tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase, [Score=76.6, Expect=2e-13]} {Dmel: FBgn0039590, CG10011, [Score=77.4, Expect=9e-14]} {Celegans: WBGene00013835, mlt-4, Molting protein MLT-4, [Score=74.3, Expect=3e-13]} {Smed: dd_Smed_v6_6779_0_1, dd_Smed_v6_6779_0_1, [Score=78.6, Expect=2e-14]} {RNA1509_31515} {RNA1310_805.1} {RNA815_431.1}
6.	MligTC455_43366	86	1.79	Mlig455_055680	Neo: - Age: logFC(26M/2M)=1.002	TNN	0.95	-	-	0.950	-	-	-	Mlig455_055680 {REF} {Length: 2991} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=110.9]} {Human: ENSG00000120332, TNN, tenascin N, [Score=97.4, Expect=4e-22]; ENSG00000166482, MFAP4, microfibril associated protein 4, [Score=93.2, Expect=1e-21]} {Mouse: ENSMUSG00000026725, Tnn, tenascin N, [Score=95.9, Expect=1e-21]; ENSMUSG00000033327, Tnxb, tenascin XB, [Score=92.0, Expect=2e-20]} {Dmel: FBgn0003326, sca, scabrous, [Score=82.4, Expect=2e-17]} {Celegans: WBGene00020516, T15B7.1, [Score=52.4, Expect=1e-07]} {Smed: dd_Smed_v6_74244_0_1, dd_Smed_v6_74244_0_1, [Score=43.5, Expect=1e-05]} {RNA1509_25852} {RNA1310_16471.3} {RNA815_7229.1}

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