Data search
Results for MligTC455_28230
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_28230 | 71 | 1.48 | Mlig455_017278 | Neo: - Age: Down-Down-Up |
Mlig455_017278 {REF} {Length: 1528} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_57922} {RNA1310_17737.1} {RNA815_22796.1} |
Cumulative graph for MligTC455_28230
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.386 | 1.598 | 0.99971 | 1.00000 | |
| RegionR2 | -0.323 | 1.598 | 0.88921 | 1.00000 | |
| RegionR3 | -1.672 | 1.598 | 0.98878 | 1.00000 | |
| RegionR4 | 3.226 | 1.598 | 0.03636 | 0.15547 | |
| RegionR5 | 1.542 | 1.598 | 0.22106 | 0.52316 | |
| RegionR6 | -0.152 | 1.598 | 0.80803 | 1.00000 | |
| RegionR7 | 1.039 | 1.598 | 0.50392 | 1.00000 | |
| RegionR8 | -1.275 | 1.598 | 1.00000 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.527 | 1.598 | 0.99978 | 1.00000 | |
| RegenerationR2 | -0.557 | 1.598 | 0.62009 | 0.92329 | |
| RegenerationR3 | 0.78 | 1.598 | 0.52190 | 0.86776 | |
| RegenerationR4 | -0.763 | 1.598 | 0.58877 | 0.90830 | |
| RegenerationR5 | -0.376 | 1.598 | 0.75553 | 0.97346 | |
| RegenerationR6 | 0.604 | 1.598 | 0.69876 | 0.92375 | |
| RegenerationBL | 1.052 | 1.598 | 0.58301 | 0.93468 | |
| RegenerationTP | 1.878 | 1.598 | 0.44694 | 0.86538 |
Genes with expression patterns similar to MligTC455_28230
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_28230 | 71 | 1.48 | Mlig455_017278 | Neo: - Age: Down-Down-Up |
4 | - | - | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_017278 {REF} {Length: 1528} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_57922} {RNA1310_17737.1} {RNA815_22796.1} | |
| 2. | MligTC455_22830 | 80 | 1.68 | Mlig455_009442 | Neo: - Age: - |
0.965 | - | - | - | - | - | 0.965 | Mlig455_009442 {REF} {Length: 1081} {NoTransDecoderORF} {RNA1509_57421} {RNA1310_25119} {RNA815_11593} | |
| 3. | MligTC455_38446 | 270 | 5.61 | Mlig455_040804 | Neo: Irradiation Age: - Region-enriched R5: 1.394/0.00361 |
USP1 | 0.964 | - | - | - | 0.964 | - | - | Mlig455_040804 {REF} {Length: 12141} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=119.0]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=47.0]; Thyroglobulin type-1 repeat [PF00086.20, score=45.3]} {Human: ENSG00000162607, USP1, ubiquitin specific peptidase 1, [Score=77.8, Expect=3e-13]; ENSG00000152484, USP12, ubiquitin specific peptidase 12, [Score=76.6, Expect=2e-13]; ENSG00000090686, USP48, ubiquitin specific peptidase 48, [Score=74.3, Expect=4e-12]} {Mouse: ENSMUSG00000028560, Usp1, ubiquitin specific peptidase 1, [Score=86.3, Expect=5e-16]} {Dmel: FBgn0039025, Usp12-46, Ubiquitin-specific protease 12/46, [Score=80.9, Expect=6e-15]} {Celegans: WBGene00011216, usp-46, Ubiquitin carboxyl-terminal hydrolase 46, [Score=84.7, Expect=2e-16]} {Smed: dd_Smed_v6_6911_0_2, dd_Smed_v6_6911_0_2, [Score=80.9, Expect=3e-15]} {RNA1509_26776, RNA1509_40394, RNA1509_44304} {RNA1310_5651.2, RNA1509_40394, RNA1509_44304} {RNA1509_40394, RNA1509_44304, RNA815_12588} |
| 4. | MligTC455_44086 | 58 | 1.2 | Mlig455_011540, Mlig455_013662, Mlig455_037887, Mlig455_046315 | Neo: - Age: - Region-enriched R4: 6.446/0.02632 |
FLCN | 0.962 | - | - | - | 0.962 | - | - | Mlig455_011540 {REF} {Length: 10822} {TRANSSPLICED} {Pfam: Vesicle coat protein involved in Golgi to plasma membrane transport [PF11704.10, score=128.0]; Forkhead domain [PF00250.20, score=110.7]; Folliculin C-terminal domain [PF16692.7, score=107.5]} {Human: ENSG00000154803, FLCN, folliculin, [Score=210, Expect=2e-57]} {Mouse: ENSMUSG00000032633, Flcn, folliculin, [Score=209, Expect=3e-57]} {Dmel: FBgn0029504, CHES-1-like, Checkpoint suppressor 1-like, [RH, Score=138, Expect=1e-32]} {Celegans: WBGene00017699, flcn-1, F22D3.2 protein; FoLliCuliN, [RH, Score=98.2, Expect=1e-20]} {Smed: dd_Smed_v6_4329_0_2, dd_Smed_v6_4329_0_2, [Score=149, Expect=1e-37]} {RNA1509_32094} {RNA1310_3296} {RNA815_1916} Mlig455_013662 {REF} {Length: 211} {NoTransDecoderORF} {RNA1310_36032} Mlig455_037887 {REF} {Length: 202} {NoTransDecoderORF} {RNA1310_36032} Mlig455_046315 {REF} {Length: 1134} {RNA1509_32094} {RNA1310_36032} {RNA815_33972} |