Data search
Results for MligTC455_38446
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_38446 | 270 | 5.61 | Mlig455_040804 | Neo: Irradiation Age: - Region-enriched R5: 1.394/0.00361 |
USP1 | Mlig455_040804 {REF} {Length: 12141} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=119.0]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=47.0]; Thyroglobulin type-1 repeat [PF00086.20, score=45.3]} {Human: ENSG00000162607, USP1, ubiquitin specific peptidase 1, [Score=77.8, Expect=3e-13]; ENSG00000152484, USP12, ubiquitin specific peptidase 12, [Score=76.6, Expect=2e-13]; ENSG00000090686, USP48, ubiquitin specific peptidase 48, [Score=74.3, Expect=4e-12]} {Mouse: ENSMUSG00000028560, Usp1, ubiquitin specific peptidase 1, [Score=86.3, Expect=5e-16]} {Dmel: FBgn0039025, Usp12-46, Ubiquitin-specific protease 12/46, [Score=80.9, Expect=6e-15]} {Celegans: WBGene00011216, usp-46, Ubiquitin carboxyl-terminal hydrolase 46, [Score=84.7, Expect=2e-16]} {Smed: dd_Smed_v6_6911_0_2, dd_Smed_v6_6911_0_2, [Score=80.9, Expect=3e-15]} {RNA1509_26776, RNA1509_40394, RNA1509_44304} {RNA1310_5651.2, RNA1509_40394, RNA1509_44304} {RNA1509_40394, RNA1509_44304, RNA815_12588} |
Cumulative graph for MligTC455_38446
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.121 | 3.089 | 0.93813 | 1.00000 | |
| RegionR2 | -0.614 | 3.089 | 0.33526 | 0.72718 | |
| RegionR3 | -0.336 | 3.089 | 0.50326 | 0.99562 | |
| RegionR4 | 0.61 | 3.089 | 0.30240 | 0.61553 | |
| RegionR5 | 1.394 | 3.089 | 0.00027 | 0.00361 | |
| RegionR6 | -0.411 | 3.089 | 0.43484 | 0.99627 | |
| RegionR7 | -0.192 | 3.089 | 0.77904 | 1.00000 | |
| RegionR8 | -0.573 | 3.089 | 0.51242 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.635 | 3.089 | 0.28670 | 0.98568 | |
| RegenerationR2 | 0.102 | 3.089 | 0.83796 | 1.00000 | |
| RegenerationR3 | 0.203 | 3.089 | 0.71022 | 0.95157 | |
| RegenerationR4 | -0.406 | 3.089 | 0.45942 | 0.84713 | |
| RegenerationR5 | -0.832 | 3.089 | 0.05486 | 0.37585 | |
| RegenerationR6 | 0.514 | 3.089 | 0.36245 | 0.70671 | |
| RegenerationBL | -0.043 | 3.089 | 0.95651 | 1.00000 | |
| RegenerationTP | -0.658 | 3.089 | 0.44856 | 0.86608 |
Genes with expression patterns similar to MligTC455_38446
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_38446 | 270 | 5.61 | Mlig455_040804 | Neo: Irradiation Age: - Region-enriched R5: 1.394/0.00361 |
USP1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_040804 {REF} {Length: 12141} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=119.0]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=47.0]; Thyroglobulin type-1 repeat [PF00086.20, score=45.3]} {Human: ENSG00000162607, USP1, ubiquitin specific peptidase 1, [Score=77.8, Expect=3e-13]; ENSG00000152484, USP12, ubiquitin specific peptidase 12, [Score=76.6, Expect=2e-13]; ENSG00000090686, USP48, ubiquitin specific peptidase 48, [Score=74.3, Expect=4e-12]} {Mouse: ENSMUSG00000028560, Usp1, ubiquitin specific peptidase 1, [Score=86.3, Expect=5e-16]} {Dmel: FBgn0039025, Usp12-46, Ubiquitin-specific protease 12/46, [Score=80.9, Expect=6e-15]} {Celegans: WBGene00011216, usp-46, Ubiquitin carboxyl-terminal hydrolase 46, [Score=84.7, Expect=2e-16]} {Smed: dd_Smed_v6_6911_0_2, dd_Smed_v6_6911_0_2, [Score=80.9, Expect=3e-15]} {RNA1509_26776, RNA1509_40394, RNA1509_44304} {RNA1310_5651.2, RNA1509_40394, RNA1509_44304} {RNA1509_40394, RNA1509_44304, RNA815_12588} |
| 2. | MligTC455_17699 | 65 | 1.36 | Mlig455_043426 | Neo: - Age: Up-Down-Down |
1.874 | - | - | - | 0.892 | - | 0.982 | Mlig455_043426 {REF} {Length: 3824} {RNA1509_38864} {RNA1310_23415, RNA1509_38864} {RNA1509_38864, RNA815_19995} | |
| 3. | MligTC455_10562 | 356 | 7.42 | Mlig455_023642 | Neo: - Age: - |
RRAGC | 1.834 | - | - | - | - | 0.872 | 0.962 | Mlig455_023642 {REF} {Length: 3636} {Pfam: Gtr1/RagA G protein conserved region [PF04670.14, score=210.6]; ADP-ribosylation factor family [PF00025.23, score=31.8]; Signal recognition particle receptor beta subunit [PF09439.12, score=24.0]; Elongation factor Tu GTP binding domain [PF00009.29, score=19.5]; 50S ribosome-binding GTPase [PF01926.25, score=19.2]} {Human: ENSG00000116954, RRAGC, Ras related GTP binding C, [RH, Score=409, Expect=2e-140]; ENSG00000025039, RRAGD, Ras related GTP binding D, [RH, Score=399, Expect=1e-136]} {Mouse: ENSMUSG00000028646, Rragc, Ras-related GTP binding C, [RH, Score=408, Expect=2e-140]; ENSMUSG00000028278, Rragd, Ras-related GTP binding D, [RH, Score=399, Expect=5e-137]} {Dmel: FBgn0033272, RagC-D, Ras-related GTP binding C/D, [RH, Score=400, Expect=2e-137]} {Celegans: WBGene00012497, ragc-1, RAs-related GTP binding protein C homolog, [RH, Score=283, Expect=1e-92]} {Smed: dd_Smed_v6_5653_0_1, dd_Smed_v6_5653_0_1, [RH, Score=419, Expect=2e-145]} {RNA1509_9291} {RNA1310_15858.1} {RNA815_8637} |
| 4. | MligTC455_20046 | 292 | 6.08 | Mlig455_028903 | Neo: - Age: - |
WDR89 | 1.675 | - | - | - | 0.711 | 0.964 | - | Mlig455_028903 {REF} {Length: 1762} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=20.3]} {Human: ENSG00000140006, WDR89, WD repeat domain 89, [RH, Score=108, Expect=1e-25]} {Mouse: ENSMUSG00000045690, Wdr89, WD repeat domain 89, [RH, Score=110, Expect=1e-26]} {Dmel: FBgn0033471, CG12134, [RH, Score=76.3, Expect=8e-15]} {Smed: dd_Smed_v6_13963_0_1, dd_Smed_v6_13963_0_1, [RH, Score=65.5, Expect=8e-12]} {RNA1509_41108, RNA1509_53990} {RNA1310_19275, RNA1509_41108, RNA1509_53990} {RNA1509_41108, RNA1509_53990, RNA815_7400} |
| 5. | MligTC455_49590 | 1773 | 36.94 | Mlig455_020347 | Neo: - |
KLF10 | 0.977 | - | - | - | - | 0.977 | - | Mlig455_020347 {REF} {Length: 1937} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=43.3]; Zinc-finger double domain [PF13465.8, score=32.8]; C2H2-type zinc finger [PF13894.8, score=23.2]; C2H2-type zinc ribbon [PF15909.7, score=20.2]} {Human: ENSG00000155090, KLF10, Kruppel like factor 10, [RH, Score=152, Expect=1e-41]; ENSG00000172059, KLF11, Kruppel like factor 11, [RH, Score=146, Expect=4e-39]} {Mouse: ENSMUSG00000037465, Klf10, Kruppel-like factor 10, [RH, Score=151, Expect=2e-41]; ENSMUSG00000020653, Klf11, Kruppel-like factor 11, [RH, Score=144, Expect=1e-38]} {Dmel: FBgn0043364, cbt, cabut, [RH, Score=147, Expect=4e-40]} {Celegans: WBGene00018990, klf-1, Kruppel-Like Factor (Zinc finger protein), [Score=135, Expect=2e-35]} {Smed: dd_Smed_v6_3638_0_1, dd_Smed_v6_3638_0_1, [RH, Score=139, Expect=2e-39]} {RNA1509_6317} {RNA1310_17904} {RNA815_7581} |
| 6. | MligTC455_45484 | 127 | 2.64 | Mlig455_054852 | Neo: - Age: - Region-enriched R8: 4.705/0.02905 |
DNTTIP2 | 0.969 | - | - | - | - | - | 0.969 | Mlig455_054852 {REF} {Length: 2704} {TRANSSPLICED} {Pfam: Fcf2 pre-rRNA processing [PF08698.13, score=82.8]} {Human: ENSG00000067334, DNTTIP2, deoxynucleotidyltransferase terminal interacting protein 2, [RH, Score=103, Expect=1e-24]} {Mouse: ENSMUSG00000039756, Dnttip2, deoxynucleotidyltransferase, terminal, interacting protein 2, [RH, Score=106, Expect=5e-26]} {Dmel: FBgn0037504, CG1142, [RH, Score=70.9, Expect=3e-14]} {Celegans: WBGene00021715, Y49F6B.2, [RH, Score=93.6, Expect=6e-23]} {Smed: dd_Smed_v6_10912_0_1, dd_Smed_v6_10912_0_1, [RH, Score=62.4, Expect=8e-12]} {RNA1509_18463} {RNA1310_33257, RNA1509_18463} {RNA1509_18463, RNA815_17985} |
| 7. | MligTC455_05024 | 1378 | 28.71 | Mlig455_052094, Mlig455_057240 | Neo: - Age: - |
STIM1 | 0.966 | - | - | - | - | - | 0.966 | Mlig455_052094 {REF} {Length: 2805} {TRANSSPLICED} {Pfam: STIM1 Orai1-activating region [PF16533.7, score=68.8]; SAM domain (Sterile alpha motif) [PF07647.19, score=19.7]} {Human: ENSG00000167323, STIM1, stromal interaction molecule 1, [RH, Score=212, Expect=6e-58]} {Mouse: ENSMUSG00000030987, Stim1, stromal interaction molecule 1, [RH, Score=213, Expect=1e-58]} {Dmel: FBgn0045073, Stim, Stromal interaction molecule, [RH, Score=171, Expect=3e-45]} {Smed: dd_Smed_v6_7756_0_1, dd_Smed_v6_7756_0_1, [Score=187, Expect=3e-50]} {RNA1509_28451} {RNA1310_6332} {RNA815_2322.1} Mlig455_057240 {REF} {Length: 3276} {TRANSSPLICED} {Pfam: STIM1 Orai1-activating region [PF16533.7, score=70.1]} {Human: ENSG00000167323, STIM1, stromal interaction molecule 1, [RH, Score=142, Expect=4e-35]} {Mouse: ENSMUSG00000030987, Stim1, stromal interaction molecule 1, [Score=148, Expect=1e-36]} {Dmel: FBgn0045073, Stim, Stromal interaction molecule, [Score=110, Expect=7e-25]} {Smed: dd_Smed_v6_7756_0_1, dd_Smed_v6_7756_0_1, [Score=129, Expect=1e-30]} {RNA1509_34755} {RNA1310_6143.1, RNA1509_34755} {RNA1509_34755, RNA815_2322.1} |
| 8. | MligTC455_28230 | 71 | 1.48 | Mlig455_017278 | Neo: - Age: Down-Down-Up |
0.964 | - | - | - | 0.964 | - | - | Mlig455_017278 {REF} {Length: 1528} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_57922} {RNA1310_17737.1} {RNA815_22796.1} | |
| 9. | MligTC455_11729 | 86 | 1.78 | Mlig455_050561 | Neo: - Age: Down-Up-Down |
SLC6A5 | 0.958 | - | - | - | - | 0.958 | - | Mlig455_050561 {REF} {Length: 2387} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=630.4]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=531, Expect=4e-180]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=536, Expect=0.0]} {Dmel: FBgn0034911, CG5549, [Score=489, Expect=6e-160]} {Celegans: WBGene00000934, dat-1, Sodium-dependent dopamine transporter, [Score=423, Expect=6e-141]} {Smed: dd_Smed_v6_4290_0_1, dd_Smed_v6_4290_0_1, [Score=494, Expect=9e-169]} {RNA1509_16667} {RNA1310_11330.2, RNA1509_16667} {RNA1509_16667, RNA815_5814} |
| 10. | MligTC455_16406 | 348 | 7.25 | Mlig455_028620, Mlig455_028644 | Neo: - Age: Down-Up-Down Region-enriched R8: 2.089/0.02921 |
0.956 | - | - | - | - | - | 0.956 | Mlig455_028620 {REF} {Length: 2517} {TRANSSPLICED} {Pfam: Herpesvirus BLRF2 protein [PF05812.14, score=24.5]} {RNA1509_47366} {RNA1310_17978.1} {RNA815_10314} Mlig455_028644 {REF} {Length: 2358} {TRANSSPLICED} {Pfam: Herpesvirus BLRF2 protein [PF05812.14, score=24.5]} {RNA1509_26279, RNA1509_40579, RNA1509_45161, RNA1509_47366, RNA1509_53187, RNA1509_54275, RNA1509_59984} {RNA1310_17978.1, RNA1509_26279, RNA1509_40579, RNA1509_45161, RNA1509_47366, RNA1509_53187, RNA1509_54275, RNA1509_59984} {RNA1509_26279, RNA1509_40579, RNA1509_45161, RNA1509_47366, RNA1509_53187, RNA1509_54275, RNA1509_59984, RNA815_10314} |
|
| 11. | MligTC455_23469 | 443 | 9.24 | Mlig455_028370, Mlig455_068830 | Neo: - Age: - |
0.95 | - | - | - | - | - | 0.950 | Mlig455_028370 {REF} {Length: 3100} {Pfam: Ribosomal protein S31e [PF17067.7, score=20.5]} {RNA1509_25511, RNA1509_48699} {RNA1310_13694, RNA1509_48699} {RNA1509_48699, RNA815_7126.1} Mlig455_068830 {REF} {Length: 3621} {RNA1509_25511} {RNA1310_13694, RNA1509_25511} {RNA1509_25511, RNA815_7126.1} |
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