TomoSeq data search

Data search

Results for MligTC455_28330

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_28330

214

4.46

Mlig455_032193

Neo: -

Age: -

Mlig455_032193 {REF} {Length: 7051} {TRANSSPLICED} {Pfam: Adenovirus late L2 mu core protein (Protein X) [PF05829.14, score=30.0]} {RNA1509_28643} {RNA1310_576.1} {RNA815_2733.1}

Cumulative graph for MligTC455_28330

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.838	2.665	0.99970	1.00000
RegionR2	1.912	2.665	0.18477	0.53703
RegionR3	2.073	2.665	0.14081	0.64124
RegionR4	2.586	2.665	0.05251	0.19935
RegionR5	-0.452	2.665	0.99426	1.00000
RegionR6	-1.217	2.665	0.96098	1.00000
RegionR7	-1.089	2.665	0.94410	1.00000
RegionR8	-0.975	2.665	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	3.055	2.665	0.59917	1.00000
RegenerationR2	1.308	2.665	0.13701	0.56495
RegenerationR3	1.124	2.665	0.27837	0.71175
RegenerationR4	1.157	2.665	0.25210	0.70073
RegenerationR5	4.142	2.665	0.00161	0.06955
RegenerationR6	4.731	2.665	0.00227	0.05407
RegenerationBL	5.005	2.665	0.00165	0.03185
RegenerationTP	4.625	2.665	0.03814	0.32568

Genes with expression patterns similar to MligTC455_28330

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_28330	214	4.46	Mlig455_032193	Neo: - Age: -		4	-	-	1.000	1.000	1.000	1.000	Mlig455_032193 {REF} {Length: 7051} {TRANSSPLICED} {Pfam: Adenovirus late L2 mu core protein (Protein X) [PF05829.14, score=30.0]} {RNA1509_28643} {RNA1310_576.1} {RNA815_2733.1}
2.	MligTC455_29537	394	8.21	Mlig455_037986, Mlig455_043226, Mlig455_043771, Mlig455_044190, Mlig455_068627	Neo: - Age: -		1.691	-	-	-	-	0.953	0.738	Mlig455_037986 {REF} {Length: 729} {RNA1310_48817} {RNA815_318.1} Mlig455_043226 {REF} {Length: 610} {NoTransDecoderORF} {RNA1509_57867} {RNA1310_1374.1} {RNA815_43995.1} Mlig455_043771 {REF} {Length: 5753} {RNA1509_40552, RNA1509_57189} {RNA1310_1374.1, RNA1509_40552, RNA1509_57189} {RNA1509_40552, RNA1509_57189, RNA815_318.1} Mlig455_044190 {REF} {Length: 804} {NoTransDecoderORF} {RNA1509_57867} {RNA1310_1374.1} {RNA815_43995.1} Mlig455_068627 {REF} {Length: 1191} {NoTransDecoderORF} {RNA1509_40552} {RNA1310_48817} {RNA815_48299}
3.	MligTC455_31789	97	2.02	Mlig455_052721	Neo: - Age: Up-Down-Down	TRIM3	1.661	-	-	-	-	0.954	0.707	Mlig455_052721 {REF} {Length: 4303} {TRANSSPLICED} {Pfam: NHL repeat [PF01436.23, score=19.4]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=63.9, Expect=4e-10]; ENSG00000109654, TRIM2, tripartite motif containing 2, [Score=63.5, Expect=5e-10]} {Mouse: ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=63.9, Expect=2e-10]; ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=63.5, Expect=3e-10]} {RNA1509_23300} {RNA1310_14145.1} {RNA815_3900.1}
4.	MligTC455_16583	1882	39.21	Mlig455_035277	Neo: - Age: -	TTC26	0.977	-	-	-	-	0.977	-	Mlig455_035277 {REF} {Length: 2402} {Pfam: Tetratricopeptide repeat [PF14559.8, score=65.1]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=50.0]; Tetratricopeptide repeat [PF07719.19, score=36.6]; Tetratricopeptide repeat [PF13371.8, score=34.4]; Tetratricopeptide repeat [PF13428.8, score=34.3]; Tetratricopeptide repeat [PF00515.30, score=25.1]; Tetratricopeptide repeat [PF13174.8, score=24.7]; Tetratricopeptide repeat [PF13181.8, score=24.7]; Tetratricopeptide repeat [PF13176.8, score=21.5]} {Human: ENSG00000105948, TTC26, tetratricopeptide repeat domain 26, [RH, Score=871, Expect=0.0]} {Mouse: ENSMUSG00000056832, Ttc26, tetratricopeptide repeat domain 26, [RH, Score=878, Expect=0.0]} {Dmel: FBgn0038358, CG4525, [RH, Score=577, Expect=0.0]} {Celegans: WBGene00001129, dyf-13, Intraflagellar transport protein 56 homolog, [RH, Score=399, Expect=1e-131]} {Smed: dd_Smed_v6_12618_0_1, dd_Smed_v6_12618_0_1, [RH, Score=868, Expect=0.0]} {RNA1509_27276, RNA1509_35708, RNA1509_3925} {RNA1310_10479, RNA1509_27276, RNA1509_35708, RNA1509_3925} {RNA1509_27276, RNA1509_35708, RNA1509_3925, RNA815_3824}
5.	MligTC455_16582	2436	50.75	Mlig455_035232	Neo: - Age: Down-Down-Down	TTC26	0.973	-	-	-	-	0.973	-	Mlig455_035232 {REF} {Length: 2109} {Pfam: Tetratricopeptide repeat [PF14559.8, score=65.1]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=50.0]; Tetratricopeptide repeat [PF07719.19, score=36.6]; Tetratricopeptide repeat [PF13371.8, score=34.4]; Tetratricopeptide repeat [PF13428.8, score=34.3]; Tetratricopeptide repeat [PF00515.30, score=25.1]; Tetratricopeptide repeat [PF13174.8, score=24.7]; Tetratricopeptide repeat [PF13181.8, score=24.7]; Tetratricopeptide repeat [PF13176.8, score=21.5]} {Human: ENSG00000105948, TTC26, tetratricopeptide repeat domain 26, [RH, Score=871, Expect=0.0]} {Mouse: ENSMUSG00000056832, Ttc26, tetratricopeptide repeat domain 26, [RH, Score=878, Expect=0.0]} {Dmel: FBgn0038358, CG4525, [RH, Score=577, Expect=0.0]} {Celegans: WBGene00001129, dyf-13, Intraflagellar transport protein 56 homolog, [RH, Score=399, Expect=1e-131]} {Smed: dd_Smed_v6_12618_0_1, dd_Smed_v6_12618_0_1, [RH, Score=868, Expect=0.0]} {RNA1509_3925} {RNA1310_10479} {RNA815_3824}
6.	MligTC455_06092	762	15.88	Mlig455_069915	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.940		0.961	-	-	-	-	0.961	-	Mlig455_069915 {REF} {Length: 3038} {Pfam: Otopetrin [PF03189.15, score=32.6]} {RNA1509_10108} {RNA1310_8141, RNA1509_10108} {RNA1509_10108, RNA815_2847.1}
7.	MligTC455_39417	2459	51.22	Mlig455_053947	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.367		0.96	-	-	-	-	0.960	-	Mlig455_053947 {REF} {Length: 3184} {RNA1509_19407} {RNA1310_3937} {RNA815_2591.1}
8.	MligTC455_24519	1035	21.55	Mlig455_026505	Neo: - Age: Up-Down-Down Region-enriched R2: 1.364/0.03756	DNAH10	0.953	-	-	-	-	0.953	-	Mlig455_026505 {REF} {Length: 14733} {Pfam: Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=521.9]; Dynein heavy chain, N-terminal region 2 [PF08393.15, score=390.5]; P-loop containing dynein motor region D4 [PF12780.9, score=341.0]; Dynein heavy chain C-terminal domain [PF18199.3, score=306.8]; ATP-binding dynein motor region [PF12781.9, score=282.5]; P-loop containing dynein motor region [PF12775.9, score=264.2]; Microtubule-binding stalk of dynein motor [PF12777.9, score=214.4]; Dynein heavy chain AAA lid domain [PF18198.3, score=174.9]; Dynein heavy chain region D6 P-loop domain [PF03028.17, score=142.3]; AAA domain (dynein-related subfamily) [PF07728.16, score=92.9]; Dynein heavy chain AAA lid domain [PF17852.3, score=81.8]; AAA+ lid domain [PF17857.3, score=63.2]; AAA domain [PF13401.8, score=44.6]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=34.7]; AAA ATPase domain [PF13191.8, score=31.6]; AAA domain [PF13238.8, score=24.7]; MoxR domain in the MoxR-vWA-beta-propeller ternary systems [PF20030.1, score=21.4]; Sigma-54 interaction domain [PF00158.28, score=21.3]} {Human: ENSG00000281935, DNAH10, dynein axonemal heavy chain 10, [RH, Score=4662, Expect=0.0]} {Mouse: ENSMUSG00000038011, Dnah10, dynein, axonemal, heavy chain 10, [Score=4676, Expect=0.0]} {Dmel: FBgn0013813, Dhc98D, Dynein heavy chain at 89D, [RH, Score=3860, Expect=0.0]} {Celegans: WBGene00000962, dhc-1, Dynein heavy chain, cytoplasmic, [Score=1408, Expect=0.0]} {Smed: dd_Smed_v6_5169_0_1, dd_Smed_v6_5169_0_1, [RH, Score=4698, Expect=0.0]} {RNA1509_19877, RNA1509_2715, RNA1509_29080, RNA1509_395} {RNA1310_40.1, RNA1509_19877, RNA1509_2715, RNA1509_29080, RNA1509_395} {RNA1509_19877, RNA1509_2715, RNA1509_29080, RNA1509_395, RNA815_20}

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