Data search
Results for MligTC455_31789
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_31789 | 97 | 2.02 | Mlig455_052721 | Neo: - Age: Up-Down-Down |
TRIM3 | Mlig455_052721 {REF} {Length: 4303} {TRANSSPLICED} {Pfam: NHL repeat [PF01436.23, score=19.4]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=63.9, Expect=4e-10]; ENSG00000109654, TRIM2, tripartite motif containing 2, [Score=63.5, Expect=5e-10]} {Mouse: ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=63.9, Expect=2e-10]; ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=63.5, Expect=3e-10]} {RNA1509_23300} {RNA1310_14145.1} {RNA815_3900.1} |
Cumulative graph for MligTC455_31789
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -4.238 | 1.915 | 0.99962 | 1.00000 | |
| RegionR2 | 1.88 | 1.915 | 0.13783 | 0.46107 | |
| RegionR3 | 0.879 | 1.915 | 0.43949 | 0.95608 | |
| RegionR4 | 0.257 | 1.915 | 0.68355 | 0.97663 | |
| RegionR5 | 1.571 | 1.915 | 0.12355 | 0.35337 | |
| RegionR6 | 0.832 | 1.915 | 0.46148 | 1.00000 | |
| RegionR7 | 2.681 | 1.915 | 0.02412 | 0.29049 | |
| RegionR8 | -3.862 | 1.915 | 1.00000 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.005 | 1.915 | 0.99999 | 1.00000 | |
| RegenerationR2 | 0.566 | 1.915 | 0.35831 | 0.78802 | |
| RegenerationR3 | 0.355 | 1.915 | 0.65768 | 0.93225 | |
| RegenerationR4 | 0.444 | 1.915 | 0.59113 | 0.90956 | |
| RegenerationR5 | -0.769 | 1.915 | 0.26048 | 0.69215 | |
| RegenerationR6 | 0.254 | 1.915 | 0.77021 | 0.96215 | |
| RegenerationBL | 1.754 | 1.915 | 0.25074 | 0.60685 | |
| RegenerationTP | 1.765 | 1.915 | 0.39872 | 0.82828 |
Genes with expression patterns similar to MligTC455_31789
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_31789 | 97 | 2.02 | Mlig455_052721 | Neo: - Age: Up-Down-Down |
TRIM3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_052721 {REF} {Length: 4303} {TRANSSPLICED} {Pfam: NHL repeat [PF01436.23, score=19.4]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=63.9, Expect=4e-10]; ENSG00000109654, TRIM2, tripartite motif containing 2, [Score=63.5, Expect=5e-10]} {Mouse: ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=63.9, Expect=2e-10]; ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=63.5, Expect=3e-10]} {RNA1509_23300} {RNA1310_14145.1} {RNA815_3900.1} |
| 2. | MligTC455_28330 | 214 | 4.46 | Mlig455_032193 | Neo: - Age: - |
1.661 | - | - | - | - | 0.954 | 0.707 | Mlig455_032193 {REF} {Length: 7051} {TRANSSPLICED} {Pfam: Adenovirus late L2 mu core protein (Protein X) [PF05829.14, score=30.0]} {RNA1509_28643} {RNA1310_576.1} {RNA815_2733.1} | |
| 3. | MligTC455_29537 | 394 | 8.21 | Mlig455_037986, Mlig455_043226, Mlig455_043771, Mlig455_044190, Mlig455_068627 | Neo: - Age: - |
0.963 | - | - | - | - | 0.963 | - | Mlig455_037986 {REF} {Length: 729} {RNA1310_48817} {RNA815_318.1} Mlig455_043226 {REF} {Length: 610} {NoTransDecoderORF} {RNA1509_57867} {RNA1310_1374.1} {RNA815_43995.1} Mlig455_043771 {REF} {Length: 5753} {RNA1509_40552, RNA1509_57189} {RNA1310_1374.1, RNA1509_40552, RNA1509_57189} {RNA1509_40552, RNA1509_57189, RNA815_318.1} Mlig455_044190 {REF} {Length: 804} {NoTransDecoderORF} {RNA1509_57867} {RNA1310_1374.1} {RNA815_43995.1} Mlig455_068627 {REF} {Length: 1191} {NoTransDecoderORF} {RNA1509_40552} {RNA1310_48817} {RNA815_48299} |
|
| 4. | MligTC455_16583 | 1882 | 39.21 | Mlig455_035277 | Neo: - Age: - |
TTC26 | 0.956 | - | - | - | - | 0.956 | - | Mlig455_035277 {REF} {Length: 2402} {Pfam: Tetratricopeptide repeat [PF14559.8, score=65.1]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=50.0]; Tetratricopeptide repeat [PF07719.19, score=36.6]; Tetratricopeptide repeat [PF13371.8, score=34.4]; Tetratricopeptide repeat [PF13428.8, score=34.3]; Tetratricopeptide repeat [PF00515.30, score=25.1]; Tetratricopeptide repeat [PF13174.8, score=24.7]; Tetratricopeptide repeat [PF13181.8, score=24.7]; Tetratricopeptide repeat [PF13176.8, score=21.5]} {Human: ENSG00000105948, TTC26, tetratricopeptide repeat domain 26, [RH, Score=871, Expect=0.0]} {Mouse: ENSMUSG00000056832, Ttc26, tetratricopeptide repeat domain 26, [RH, Score=878, Expect=0.0]} {Dmel: FBgn0038358, CG4525, [RH, Score=577, Expect=0.0]} {Celegans: WBGene00001129, dyf-13, Intraflagellar transport protein 56 homolog, [RH, Score=399, Expect=1e-131]} {Smed: dd_Smed_v6_12618_0_1, dd_Smed_v6_12618_0_1, [RH, Score=868, Expect=0.0]} {RNA1509_27276, RNA1509_35708, RNA1509_3925} {RNA1310_10479, RNA1509_27276, RNA1509_35708, RNA1509_3925} {RNA1509_27276, RNA1509_35708, RNA1509_3925, RNA815_3824} |
| 5. | MligTC455_06092 | 762 | 15.88 | Mlig455_069915 | Neo: - |
0.952 | - | - | - | - | 0.952 | - | Mlig455_069915 {REF} {Length: 3038} {Pfam: Otopetrin [PF03189.15, score=32.6]} {RNA1509_10108} {RNA1310_8141, RNA1509_10108} {RNA1509_10108, RNA815_2847.1} | |
| 6. | MligTC455_39645 | 162 | 3.37 | Mlig455_020209 | Neo: - Age: - |
SCNN1B | 0.952 | - | - | - | - | - | 0.952 | Mlig455_020209 {REF} {Length: 3023} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=191.2]} {Human: ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [Score=62.0, Expect=3e-09]} {Mouse: ENSMUSG00000030873, Scnn1b, sodium channel, nonvoltage-gated 1 beta, [Score=51.6, Expect=3e-06]; ENSMUSG00000000216, Scnn1g, sodium channel, nonvoltage-gated 1 gamma, [Score=50.8, Expect=6e-06]} {Celegans: WBGene00006832, unc-105, Degenerin-like protein unc-105, [Score=89.4, Expect=4e-18]} {Smed: dd_Smed_v6_22997_0_1, dd_Smed_v6_22997_0_1, [RH, Score=359, Expect=1e-114]} {RNA1509_55954} {RNA1310_12497, RNA1509_55954} {RNA1509_55954, RNA815_17110} |
| 7. | MligTC455_24519 | 1035 | 21.55 | Mlig455_026505 | Neo: - Age: Up-Down-Down Region-enriched R2: 1.364/0.03756 |
DNAH10 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_026505 {REF} {Length: 14733} {Pfam: Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=521.9]; Dynein heavy chain, N-terminal region 2 [PF08393.15, score=390.5]; P-loop containing dynein motor region D4 [PF12780.9, score=341.0]; Dynein heavy chain C-terminal domain [PF18199.3, score=306.8]; ATP-binding dynein motor region [PF12781.9, score=282.5]; P-loop containing dynein motor region [PF12775.9, score=264.2]; Microtubule-binding stalk of dynein motor [PF12777.9, score=214.4]; Dynein heavy chain AAA lid domain [PF18198.3, score=174.9]; Dynein heavy chain region D6 P-loop domain [PF03028.17, score=142.3]; AAA domain (dynein-related subfamily) [PF07728.16, score=92.9]; Dynein heavy chain AAA lid domain [PF17852.3, score=81.8]; AAA+ lid domain [PF17857.3, score=63.2]; AAA domain [PF13401.8, score=44.6]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=34.7]; AAA ATPase domain [PF13191.8, score=31.6]; AAA domain [PF13238.8, score=24.7]; MoxR domain in the MoxR-vWA-beta-propeller ternary systems [PF20030.1, score=21.4]; Sigma-54 interaction domain [PF00158.28, score=21.3]} {Human: ENSG00000281935, DNAH10, dynein axonemal heavy chain 10, [RH, Score=4662, Expect=0.0]} {Mouse: ENSMUSG00000038011, Dnah10, dynein, axonemal, heavy chain 10, [Score=4676, Expect=0.0]} {Dmel: FBgn0013813, Dhc98D, Dynein heavy chain at 89D, [RH, Score=3860, Expect=0.0]} {Celegans: WBGene00000962, dhc-1, Dynein heavy chain, cytoplasmic, [Score=1408, Expect=0.0]} {Smed: dd_Smed_v6_5169_0_1, dd_Smed_v6_5169_0_1, [RH, Score=4698, Expect=0.0]} {RNA1509_19877, RNA1509_2715, RNA1509_29080, RNA1509_395} {RNA1310_40.1, RNA1509_19877, RNA1509_2715, RNA1509_29080, RNA1509_395} {RNA1509_19877, RNA1509_2715, RNA1509_29080, RNA1509_395, RNA815_20} |
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