Data search
Results for MligTC455_28430
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_28430 | 161 | 3.35 | Mlig455_058777, Mlig455_066475 | Neo: - Age: - |
Mlig455_058777 {REF} {Length: 1822} {RNA1509_18349} {RNA1310_37185} {RNA815_17990} Mlig455_066475 {REF} {Length: 5204} {tRNA: Val(CAC),pseudo, score=36.5} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1} |
Cumulative graph for MligTC455_28430
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.652 | 2.35 | 0.64174 | 1.00000 | |
| RegionR2 | 1.28 | 2.35 | 0.29280 | 0.68107 | |
| RegionR3 | -0.913 | 2.35 | 0.98586 | 1.00000 | |
| RegionR4 | -0.133 | 2.35 | 0.90274 | 1.00000 | |
| RegionR5 | -0.003 | 2.35 | 0.85307 | 1.00000 | |
| RegionR6 | -0.494 | 2.35 | 0.95792 | 1.00000 | |
| RegionR7 | 1.829 | 2.35 | 0.13119 | 0.68214 | |
| RegionR8 | 1.086 | 2.35 | 0.53601 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -2.077 | 2.35 | 0.99981 | 1.00000 | |
| RegenerationR2 | 0.256 | 2.35 | 0.72534 | 0.96407 | |
| RegenerationR3 | 1.403 | 2.35 | 0.17009 | 0.60508 | |
| RegenerationR4 | 0.224 | 2.35 | 0.79509 | 0.98494 | |
| RegenerationR5 | 0.223 | 2.35 | 0.80484 | 0.98981 | |
| RegenerationR6 | 1.264 | 2.35 | 0.20458 | 0.54654 | |
| RegenerationBL | 1.012 | 2.35 | 0.31416 | 0.68018 | |
| RegenerationTP | 0.25 | 2.35 | 0.83290 | 1.00000 |
Genes with expression patterns similar to MligTC455_28430
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_28430 | 161 | 3.35 | Mlig455_058777, Mlig455_066475 | Neo: - Age: - |
5 | 1.000 | - | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_058777 {REF} {Length: 1822} {RNA1509_18349} {RNA1310_37185} {RNA815_17990} Mlig455_066475 {REF} {Length: 5204} {tRNA: Val(CAC),pseudo, score=36.5} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1} |
|
| 2. | MligTC455_28281 | 261 | 5.44 | Mlig455_038001, Mlig455_038004 | Neo: - Age: logFC(26M/2M)=1.320 |
3.502 | 0.981 | - | 0.860 | - | 0.725 | 0.936 | Mlig455_038001 {REF} {Length: 3662} {tRNA: Val(CAC),pseudo, score=27.5} {RNA1509_18349} {RNA1310_29429.1} {RNA815_17990} Mlig455_038004 {REF} {Length: 5974} {tRNA: Val(CAC),pseudo, score=27.5} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=51.2]; DDHD domain [PF02862.19, score=28.2]; SIT4 phosphatase-associated protein [PF04499.17, score=21.1]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=47.0, Expect=2e-06]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1} |
|
| 3. | MligTC455_28280 | 163 | 3.4 | Mlig455_017596 | Neo: - Age: Up-Down-Down |
2.666 | 0.977 | - | - | 0.777 | - | 0.912 | Mlig455_017596 {REF} {Length: 6760} {tRNA: Val(CAC),pseudo, score=25.0} {RNA1509_40399} {RNA1310_340.1} {RNA815_1857} | |
| 4. | MligTC455_21518 | 2357 | 49.1 | Mlig455_012901 | Neo: - Age: logFC(26M/2M)=-0.284 |
GHDC | 1.774 | - | - | - | - | 0.972 | 0.802 | Mlig455_012901 {REF} {Length: 2002} {Pfam: GH3 auxin-responsive promoter [PF03321.15, score=191.7]} {Human: ENSG00000167925, GHDC, GH3 domain containing, [Score=52.0, Expect=1e-06]} {RNA1509_59400} {RNA1310_11058.2} {RNA815_4223.1} |
| 5. | MligTC455_25820 | 32 | 0.67 | Mlig455_061208 | Neo: - Age: - |
1.769 | - | - | 0.961 | - | 0.808 | - | Mlig455_061208 {REF} {Length: 1262} {Celegans: WBGene00018026, F35A5.4, [Score=48.1, Expect=1e-06]} {RNA1310_123558} | |
| 6. | MligTC455_39860 | 56 | 1.17 | Mlig455_046932 | Neo: - Age: - |
1.673 | 0.719 | - | - | - | 0.954 | - | Mlig455_046932 {REF} {Length: 920} {RNA1310_30968} {RNA815_45889} | |
| 7. | MligTC455_30309 | 841 | 17.51 | Mlig455_029677 | Neo: - Age: logFC(26M/2M)=-0.331 |
CASP7 | 0.96 | - | - | - | - | 0.960 | - | Mlig455_029677 {REF} {Length: 3720} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=143.2]; Ankyrin repeats (many copies) [PF13637.8, score=117.0]; Caspase domain [PF00656.24, score=107.2]; Ankyrin repeat [PF00023.32, score=78.6]; Ankyrin repeats (many copies) [PF13857.8, score=77.0]; Ankyrin repeat [PF13606.8, score=70.6]; Baculovirus polyhedron envelope protein, PEP, N terminus [PF04512.14, score=24.1]; L27_2 [PF09045.12, score=19.1]} {Human: ENSG00000165806, CASP7, caspase 7, [Score=115, Expect=2e-27]; ENSG00000003400, CASP10, caspase 10, [Score=114, Expect=7e-26]; ENSG00000164305, CASP3, caspase 3, [Score=111, Expect=1e-26]} {Mouse: ENSMUSG00000025076, Casp7, caspase 7, [Score=114, Expect=1e-27]} {Dmel: FBgn0028381, Decay, Death executioner caspase related to Apopain/Yama, [Score=80.9, Expect=3e-16]} {Celegans: WBGene00000819, csp-1, Caspase A Caspase A subunit p16 Caspase A subunit p14, [Score=73.9, Expect=3e-14]} {Smed: dd_Smed_v6_1167_0_1, dd_Smed_v6_1167_0_1, [Score=121, Expect=8e-31]} {RNA1509_18682, RNA1509_35845} {RNA1310_39251, RNA1509_18682} {RNA1509_18682, RNA815_2803.1} |
| 8. | MligTC455_29517 | 224 | 4.66 | Mlig455_029414 | Neo: - Age: - Region-enriched R4: 1.973/0.03463 |
GRIA2 | 0.956 | - | - | - | - | 0.956 | - | Mlig455_029414 {REF} {Length: 4533} {Pfam: Ligand-gated ion channel [PF00060.28, score=102.7]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=60.2]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=22.3]} {Human: ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [Score=156, Expect=9e-39]; ENSG00000125675, GRIA3, glutamate ionotropic receptor AMPA type subunit 3, [Score=155, Expect=2e-38]; ENSG00000182771, GRID1, glutamate ionotropic receptor delta type subunit 1, [Score=154, Expect=5e-38]; ENSG00000152578, GRIA4, glutamate ionotropic receptor AMPA type subunit 4, [Score=152, Expect=2e-37]} {Mouse: ENSMUSG00000033981, Gria2, glutamate receptor, ionotropic, AMPA2 (alpha 2), [Score=156, Expect=6e-39]; ENSMUSG00000001986, Gria3, glutamate receptor, ionotropic, AMPA3 (alpha 3), [Score=155, Expect=2e-38]; ENSMUSG00000025892, Gria4, glutamate receptor, ionotropic, AMPA4 (alpha 4), [Score=153, Expect=7e-38]} {Dmel: FBgn0038837, CG3822, [Score=148, Expect=1e-36]} {Celegans: WBGene00001615, glr-4, GLutamate Receptor family (AMPA), [Score=132, Expect=1e-31]} {Smed: dd_Smed_v6_31078_0_1, dd_Smed_v6_31078_0_1, [Score=234, Expect=8e-70]} {RNA1509_31776} {RNA1310_7321.1} {RNA815_2521.1} |
| 9. | MligTC455_24149 | 82 | 1.71 | Mlig455_021675 | Neo: - Age: - |
0.953 | - | - | 0.953 | - | - | - | Mlig455_021675 {REF} {Length: 3991} {RNA1310_30193} {RNA815_26107} | |
| 10. | MligTC455_46399 | 80 | 1.66 | Mlig455_022117 | Neo: - Age: Up-Up-Down |
0.952 | - | - | - | - | 0.952 | - | Mlig455_022117 {REF} {Length: 1088} {TRANSSPLICED} {RNA1310_7748.1} {RNA815_21787} |
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