Data search
Results for MligTC455_28458
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_28458 | 1235 | 25.73 | Mlig455_022376 | Neo: - Age: Down-Down-Up, logFC(26M/2M)=2.894 Region-enriched R4: 1.800/0.00006 |
CHD3 | Mlig455_022376 {REF} {Length: 8563} {Pfam: CHDCT2 (NUC038) domain [PF08074.13, score=236.8]; SNF2-related domain [PF00176.25, score=208.8]; Domain of Unknown Function (DUF1086) [PF06461.13, score=160.0]; Helicase conserved C-terminal domain [PF00271.33, score=74.7]; Domain of Unknown Function (DUF1087) [PF06465.15, score=70.2]; PHD-finger [PF00628.31, score=62.7]; Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=56.9]; Type III restriction enzyme, res subunit [PF04851.17, score=31.8]; CHDNT (NUC034) domain [PF08073.14, score=30.0]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=28.2]; PHD-finger [PF13831.8, score=22.1]} {Human: ENSG00000170004, CHD3, chromodomain helicase DNA binding protein 3, [RH, Score=1751, Expect=0.0]; ENSG00000116254, CHD5, chromodomain helicase DNA binding protein 5, [RH, Score=1730, Expect=0.0]; ENSG00000111642, CHD4, chromodomain helicase DNA binding protein 4, [RH, Score=1730, Expect=0.0]} {Mouse: ENSMUSG00000005045, Chd5, chromodomain helicase DNA binding protein 5, [RH, Score=1755, Expect=0.0]; ENSMUSG00000018474, Chd3, chromodomain helicase DNA binding protein 3, [RH, Score=1727, Expect=0.0]} {Dmel: FBgn0262519, Mi-2, [RH, Score=1763, Expect=0.0]} {Celegans: WBGene00000482, chd-3, Chromodomain-helicase-DNA-binding protein 3 homolog, [RH, Score=1548, Expect=0.0]} {Smed: dd_Smed_v6_2331_0_1, dd_Smed_v6_2331_0_1, [RH, Score=1723, Expect=0.0]} {RNA1509_4759} {RNA1310_3082.1} {RNA815_1229} |
Cumulative graph for MligTC455_28458
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.558 | 4.784 | 0.05608 | 0.54900 | |
| RegionR2 | -0.259 | 4.784 | 0.56222 | 0.92422 | |
| RegionR3 | 0.163 | 4.784 | 0.64749 | 1.00000 | |
| RegionR4 | 1.8 | 4.784 | 0.00000 | 0.00006 | |
| RegionR5 | 1.19 | 4.784 | 0.00008 | 0.00140 | |
| RegionR6 | 0.564 | 4.784 | 0.10693 | 0.59903 | |
| RegionR7 | 0.468 | 4.784 | 0.27706 | 0.90849 | |
| RegionR8 | -1.369 | 4.784 | 0.05180 | 0.44377 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 2.396 | 4.784 | 0.14826 | 0.88929 | |
| RegenerationR2 | 0.162 | 4.784 | 0.58315 | 0.90841 | |
| RegenerationR3 | 0.192 | 4.784 | 0.55883 | 0.88797 | |
| RegenerationR4 | -0.386 | 4.784 | 0.24495 | 0.69314 | |
| RegenerationR5 | -0.005 | 4.784 | 0.98356 | 1.00000 | |
| RegenerationR6 | 0.543 | 4.784 | 0.08905 | 0.37215 | |
| RegenerationBL | 0.985 | 4.784 | 0.01088 | 0.10563 | |
| RegenerationTP | 0.045 | 4.784 | 0.92915 | 1.00000 |
Genes with expression patterns similar to MligTC455_28458
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_28458 | 1235 | 25.73 | Mlig455_022376 | Neo: - Age: Down-Down-Up, logFC(26M/2M)=2.894 Region-enriched R4: 1.800/0.00006 |
CHD3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_022376 {REF} {Length: 8563} {Pfam: CHDCT2 (NUC038) domain [PF08074.13, score=236.8]; SNF2-related domain [PF00176.25, score=208.8]; Domain of Unknown Function (DUF1086) [PF06461.13, score=160.0]; Helicase conserved C-terminal domain [PF00271.33, score=74.7]; Domain of Unknown Function (DUF1087) [PF06465.15, score=70.2]; PHD-finger [PF00628.31, score=62.7]; Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=56.9]; Type III restriction enzyme, res subunit [PF04851.17, score=31.8]; CHDNT (NUC034) domain [PF08073.14, score=30.0]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=28.2]; PHD-finger [PF13831.8, score=22.1]} {Human: ENSG00000170004, CHD3, chromodomain helicase DNA binding protein 3, [RH, Score=1751, Expect=0.0]; ENSG00000116254, CHD5, chromodomain helicase DNA binding protein 5, [RH, Score=1730, Expect=0.0]; ENSG00000111642, CHD4, chromodomain helicase DNA binding protein 4, [RH, Score=1730, Expect=0.0]} {Mouse: ENSMUSG00000005045, Chd5, chromodomain helicase DNA binding protein 5, [RH, Score=1755, Expect=0.0]; ENSMUSG00000018474, Chd3, chromodomain helicase DNA binding protein 3, [RH, Score=1727, Expect=0.0]} {Dmel: FBgn0262519, Mi-2, [RH, Score=1763, Expect=0.0]} {Celegans: WBGene00000482, chd-3, Chromodomain-helicase-DNA-binding protein 3 homolog, [RH, Score=1548, Expect=0.0]} {Smed: dd_Smed_v6_2331_0_1, dd_Smed_v6_2331_0_1, [RH, Score=1723, Expect=0.0]} {RNA1509_4759} {RNA1310_3082.1} {RNA815_1229} |
| 2. | MligTC455_28459 | 1199 | 24.98 | Mlig455_022464 | Neo: - Age: logFC(26M/2M)=-0.694 Region-enriched R4: 1.862/0.00004 |
5.967 | 0.985 | 0.999 | 1.000 | 0.998 | 0.988 | 0.997 | Mlig455_022464 {REF} {Length: 1471} {NoTransDecoderORF} {RNA1509_51870} {RNA1310_47270.1} {RNA815_29395} | |
| 3. | MligTC455_28460 | 1288 | 26.83 | Mlig455_069869 | Neo: Int S/G2/M Age: logFC(26M/2M)=-0.231 Region-enriched R4: 1.755/0.00011 |
CHD4 | 5.912 | 0.995 | 0.983 | 0.957 | 0.993 | 0.995 | 0.989 | Mlig455_069869 {REF} {Length: 7096} {TRANSSPLICED} {Pfam: CHDCT2 (NUC038) domain [PF08074.13, score=236.8]; SNF2-related domain [PF00176.25, score=208.8]; Domain of Unknown Function (DUF1086) [PF06461.13, score=159.6]; Helicase conserved C-terminal domain [PF00271.33, score=74.7]; Domain of Unknown Function (DUF1087) [PF06465.15, score=70.1]; PHD-finger [PF00628.31, score=62.6]; Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=56.8]; Type III restriction enzyme, res subunit [PF04851.17, score=34.6]; CHDNT (NUC034) domain [PF08073.14, score=30.0]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=28.2]; PHD-finger [PF13831.8, score=22.0]} {Human: ENSG00000111642, CHD4, chromodomain helicase DNA binding protein 4, [RH, Score=1731, Expect=0.0]; ENSG00000116254, CHD5, chromodomain helicase DNA binding protein 5, [RH, Score=1727, Expect=0.0]; ENSG00000170004, CHD3, chromodomain helicase DNA binding protein 3, [RH, Score=1726, Expect=0.0]} {Mouse: ENSMUSG00000018474, Chd3, chromodomain helicase DNA binding protein 3, [RH, Score=1734, Expect=0.0]; ENSMUSG00000063870, Chd4, chromodomain helicase DNA binding protein 4, [RH, Score=1726, Expect=0.0]} {Dmel: FBgn0262519, Mi-2, [RH, Score=1761, Expect=0.0]} {Celegans: WBGene00000482, chd-3, Chromodomain-helicase-DNA-binding protein 3 homolog, [RH, Score=1551, Expect=0.0]} {Smed: dd_Smed_v6_2331_0_1, dd_Smed_v6_2331_0_1, [RH, Score=1723, Expect=0.0]} {RNA1509_26970, RNA1509_34830, RNA1509_4759, RNA1509_51016, RNA1509_51870} {RNA1310_3082.1, RNA1509_26970, RNA1509_34830, RNA1509_51016, RNA1509_51870} {RNA1509_26970, RNA1509_34830, RNA1509_51016, RNA1509_51870, RNA815_1229} |
| 4. | MligTC455_22791 | 8103 | 168.82 | Mlig455_037099 | Neo: Int S/G2/M Age: Down-Up-Down |
HNRNPK | 1.733 | - | - | - | 0.952 | 0.781 | - | Mlig455_037099 {REF} {Length: 1961} {TRANSSPLICED} {Pfam: KH domain [PF00013.31, score=155.3]; KH domain [PF07650.19, score=61.7]; KH domain [PF13083.8, score=20.5]} {Human: ENSG00000165119, HNRNPK, heterogeneous nuclear ribonucleoprotein K, [RH, Score=161, Expect=2e-45]} {Mouse: ENSMUSG00000021546, Hnrnpk, heterogeneous nuclear ribonucleoprotein K, [RH, Score=162, Expect=1e-46]} {Dmel: FBgn0267791, HnRNP-K, Heterogeneous nuclear ribonucleoprotein K, [RH, Score=151, Expect=3e-41]} {Celegans: WBGene00017816, hrpk-1, Heterogeneous nuclear RibonucleoProtein (HnRNP) K homolog, [RH, Score=213, Expect=1e-65]} {Smed: dd_Smed_v6_1569_0_1, dd_Smed_v6_1569_0_1, [RH, Score=206, Expect=3e-63]} {RNA1509_10759} {RNA1310_6557.1} {RNA815_5052.1} |
| 5. | MligTC455_39193 | 2183 | 45.47 | Mlig455_062607 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.251 Region-enriched R5: 1.083/0.00008 |
SND1 | 1.714 | - | - | 0.763 | - | - | 0.951 | Mlig455_062607 {REF} {Length: 6180} {Pfam: Staphylococcal nuclease homologue [PF00565.19, score=182.0]; Tudor domain [PF00567.26, score=37.9]} {Human: ENSG00000197157, SND1, staphylococcal nuclease and tudor domain containing 1, [RH, Score=698, Expect=0.0]} {Mouse: ENSMUSG00000001424, Snd1, staphylococcal nuclease and tudor domain containing 1, [RH, Score=696, Expect=0.0]} {Dmel: FBgn0035121, Tudor-SN, Tudor staphylococcal nuclease, [RH, Score=602, Expect=0.0]} {Celegans: WBGene00006626, tsn-1, Tudor Staphylococcal Nuclease homolog, [RH, Score=607, Expect=0.0]} {Smed: dd_Smed_v6_906_0_1, dd_Smed_v6_906_0_1, [RH, Score=698, Expect=0.0]} {RNA1509_16100, RNA1509_16974, RNA1509_18184, RNA1509_22268, RNA1509_3189, RNA1509_38948, RNA1509_54714} {RNA1310_6353, RNA1509_16100, RNA1509_16974, RNA1509_18184, RNA1509_22268, RNA1509_3189, RNA1509_38948, RNA1509_54714} {RNA1509_16100, RNA1509_16974, RNA1509_18184, RNA1509_22268, RNA1509_3189, RNA1509_38948, RNA1509_54714, RNA815_2807} |
| 6. | MligTC455_43046 | 1867 | 38.9 | Mlig455_016895, Mlig455_017001 | Neo: - Age: - Region-enriched R5: 1.031/0.00546 |
0.96 | - | - | - | - | 0.960 | - | Mlig455_016895 {REF} {Length: 3557} {TRANSSPLICED} {RNA1509_42180} {RNA1310_32828, RNA1509_42180} {RNA1509_42180, RNA815_11330} Mlig455_017001 {REF} {Length: 2032} {TRANSSPLICED} {RNA1509_42180} {RNA1310_32828} {RNA815_11330} |
|
| 7. | MligTC455_32859 | 280 | 5.83 | Mlig455_055206 | Neo: - Age: - |
0.957 | - | - | - | - | 0.957 | - | Mlig455_055206 {REF} {Length: 1588} {TRANSSPLICED} {Pfam: Nucleolar and spindle-associated protein [PF16006.7, score=49.6]} {RNA1509_35887} {RNA1310_11141.1} {RNA815_19948} |
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