Data search
Results for MligTC455_28526
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_28526 | 593 | 12.36 | Mlig455_056211, Mlig455_056221 | Neo: - Age: - Region-enriched R4: 2.101/0.03632 |
OCA2 | Mlig455_056211 {REF} {Length: 5739} {Pfam: Citrate transporter [PF03600.18, score=173.5]; Metallopeptidase family M24 [PF00557.26, score=104.5]; Sodium:sulfate symporter transmembrane region [PF00939.21, score=57.9]; C-terminal region of peptidase_M24 [PF16188.7, score=47.6]; Arsenical pump membrane protein [PF02040.17, score=19.4]} {Human: ENSG00000104044, OCA2, OCA2 melanosomal transmembrane protein, [RH, Score=596, Expect=0.0]} {Mouse: ENSMUSG00000030450, Oca2, oculocutaneous albinism II, [RH, Score=585, Expect=0.0]} {Dmel: FBgn0041150, hoe1, hoepel1, [RH, Score=540, Expect=7e-175]} {Celegans: WBGene00000155, app-1, Xaa-Pro aminopeptidase app-1, [Score=172, Expect=8e-45]} {Smed: dd_Smed_v6_5800_0_1, dd_Smed_v6_5800_0_1, [RH, Score=652, Expect=0.0]} {RNA1509_12085} {RNA1310_6295.2} {RNA815_1356.1} Mlig455_056221 {REF} {Length: 7398} {Pfam: Citrate transporter [PF03600.18, score=113.0]; Metallopeptidase family M24 [PF00557.26, score=107.5]; Creatinase/Prolidase N-terminal domain [PF16189.7, score=73.5]; Creatinase/Prolidase N-terminal domain [PF01321.20, score=53.3]; C-terminal region of peptidase_M24 [PF16188.7, score=47.7]; Arsenical pump membrane protein [PF02040.17, score=20.6]; Dicarboxylate carrier protein MatC N-terminus [PF07158.13, score=19.0]} {Human: ENSG00000277361, OCA2, OCA2 melanosomal transmembrane protein, [Score=330, Expect=2e-97]; ENSG00000104044, OCA2, OCA2 melanosomal transmembrane protein, [Score=329, Expect=3e-96]} {Mouse: ENSMUSG00000030450, Oca2, oculocutaneous albinism II, [Score=320, Expect=2e-93]} {Dmel: FBgn0041150, hoe1, hoepel1, [Score=278, Expect=4e-79]} {Celegans: WBGene00000155, app-1, Xaa-Pro aminopeptidase app-1, [Score=217, Expect=1e-59]} {Smed: dd_Smed_v6_5800_0_1, dd_Smed_v6_5800_0_1, [Score=348, Expect=8e-105]} {RNA1509_12085, RNA1509_56882} {RNA1310_6295.2, RNA1509_56882} {RNA1509_56882, RNA815_1356.1} |
Cumulative graph for MligTC455_28526
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -6.377 | 4.147 | 0.10135 | 0.67128 | |
| RegionR2 | 0.697 | 4.147 | 0.47439 | 0.86005 | |
| RegionR3 | 1.94 | 4.147 | 0.00203 | 0.05002 | |
| RegionR4 | 2.101 | 4.147 | 0.00501 | 0.03632 | |
| RegionR5 | 1.897 | 4.147 | 0.00127 | 0.01233 | |
| RegionR6 | 1.166 | 4.147 | 0.13824 | 0.66804 | |
| RegionR7 | -0.467 | 4.147 | 0.95091 | 1.00000 | |
| RegionR8 | -0.958 | 4.147 | 0.98537 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.095 | 4.147 | 0.99994 | 1.00000 | |
| RegenerationR2 | 0.26 | 4.147 | 0.58634 | 0.90916 | |
| RegenerationR3 | 0.079 | 4.147 | 0.87641 | 1.00000 | |
| RegenerationR4 | 0.031 | 4.147 | 0.95920 | 1.00000 | |
| RegenerationR5 | 0.505 | 4.147 | 0.26896 | 0.70033 | |
| RegenerationR6 | -0.174 | 4.147 | 0.74098 | 0.94754 | |
| RegenerationBL | 0.638 | 4.147 | 0.37936 | 0.74790 | |
| RegenerationTP | 0.584 | 4.147 | 0.51382 | 0.91048 |
Genes with expression patterns similar to MligTC455_28526
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_28526 | 593 | 12.36 | Mlig455_056211, Mlig455_056221 | Neo: - Age: - Region-enriched R4: 2.101/0.03632 |
OCA2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_056211 {REF} {Length: 5739} {Pfam: Citrate transporter [PF03600.18, score=173.5]; Metallopeptidase family M24 [PF00557.26, score=104.5]; Sodium:sulfate symporter transmembrane region [PF00939.21, score=57.9]; C-terminal region of peptidase_M24 [PF16188.7, score=47.6]; Arsenical pump membrane protein [PF02040.17, score=19.4]} {Human: ENSG00000104044, OCA2, OCA2 melanosomal transmembrane protein, [RH, Score=596, Expect=0.0]} {Mouse: ENSMUSG00000030450, Oca2, oculocutaneous albinism II, [RH, Score=585, Expect=0.0]} {Dmel: FBgn0041150, hoe1, hoepel1, [RH, Score=540, Expect=7e-175]} {Celegans: WBGene00000155, app-1, Xaa-Pro aminopeptidase app-1, [Score=172, Expect=8e-45]} {Smed: dd_Smed_v6_5800_0_1, dd_Smed_v6_5800_0_1, [RH, Score=652, Expect=0.0]} {RNA1509_12085} {RNA1310_6295.2} {RNA815_1356.1} Mlig455_056221 {REF} {Length: 7398} {Pfam: Citrate transporter [PF03600.18, score=113.0]; Metallopeptidase family M24 [PF00557.26, score=107.5]; Creatinase/Prolidase N-terminal domain [PF16189.7, score=73.5]; Creatinase/Prolidase N-terminal domain [PF01321.20, score=53.3]; C-terminal region of peptidase_M24 [PF16188.7, score=47.7]; Arsenical pump membrane protein [PF02040.17, score=20.6]; Dicarboxylate carrier protein MatC N-terminus [PF07158.13, score=19.0]} {Human: ENSG00000277361, OCA2, OCA2 melanosomal transmembrane protein, [Score=330, Expect=2e-97]; ENSG00000104044, OCA2, OCA2 melanosomal transmembrane protein, [Score=329, Expect=3e-96]} {Mouse: ENSMUSG00000030450, Oca2, oculocutaneous albinism II, [Score=320, Expect=2e-93]} {Dmel: FBgn0041150, hoe1, hoepel1, [Score=278, Expect=4e-79]} {Celegans: WBGene00000155, app-1, Xaa-Pro aminopeptidase app-1, [Score=217, Expect=1e-59]} {Smed: dd_Smed_v6_5800_0_1, dd_Smed_v6_5800_0_1, [Score=348, Expect=8e-105]} {RNA1509_12085, RNA1509_56882} {RNA1310_6295.2, RNA1509_56882} {RNA1509_56882, RNA815_1356.1} |
| 2. | MligTC455_34247 | 392 | 8.17 | Mlig455_055985 | Neo: - Age: Up-Down-Down Region-enriched R3: 2.845/0.00559 |
MALRD1 | 2.521 | - | 0.772 | - | 0.964 | - | 0.785 | Mlig455_055985 {REF} {Length: 13804} {Pfam: MAM domain, meprin/A5/mu [PF00629.25, score=1742.1]; Low-density lipoprotein receptor domain class A [PF00057.20, score=251.5]} {Human: ENSG00000204740, MALRD1, MAM and LDL receptor class A domain containing 1, [Score=741, Expect=0.0]} {Mouse: ENSMUSG00000075520, Malrd1, MAM and LDL receptor class A domain containing 1, [Score=718, Expect=0.0]} {Dmel: FBgn0040505, Alk, Anaplastic lymphoma kinase, [Score=97.1, Expect=3e-19]} {RNA1509_339} {RNA1310_2} {RNA815_2} |
| 3. | MligTC455_13458 | 928 | 19.33 | Mlig455_024267, Mlig455_024269 | Neo: - Age: - Region-enriched R3: 2.154/0.00126 |
1.717 | - | - | - | 0.959 | - | 0.758 | Mlig455_024267 {REF} {Length: 4032} {TRANSSPLICED} {Dmel: FBgn0039113, CG10217, [RH, Score=308, Expect=2e-96]} {Smed: dd_Smed_v6_2624_0_1, dd_Smed_v6_2624_0_1, [RH, Score=566, Expect=0.0]} {RNA1509_53660} {RNA1310_12023.1} {RNA815_3958.1} Mlig455_024269 {REF} {Length: 3882} {TRANSSPLICED} {Dmel: FBgn0039113, CG10217, [RH, Score=308, Expect=2e-96]} {Smed: dd_Smed_v6_2624_0_1, dd_Smed_v6_2624_0_1, [RH, Score=566, Expect=0.0]} {RNA1509_24344, RNA1509_29477, RNA1509_40857, RNA1509_53660, RNA1509_54476, RNA1509_9360} {RNA1310_12023.1, RNA1509_24344, RNA1509_29477, RNA1509_40857, RNA1509_53660, RNA1509_54476, RNA1509_9360} {RNA1509_24344, RNA1509_29477, RNA1509_40857, RNA1509_53660, RNA1509_54476, RNA1509_9360, RNA815_3958.1} |
|
| 4. | MligTC455_39785 | 826 | 17.21 | Mlig455_060611, Mlig455_066648 | Neo: - Age: - Region-enriched R4: 1.206/0.01983 |
SHANK3 | 0.962 | - | - | - | 0.962 | - | - | Mlig455_060611 {REF} {Length: 6123} {TRANSSPLICED} {tRNA: Arg(ACG), score=72.3} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=80.8]; Ankyrin repeats (3 copies) [PF12796.9, score=78.2]; Ankyrin repeats (many copies) [PF13857.8, score=58.9]; Ankyrin repeat [PF00023.32, score=51.1]; Ankyrin repeat [PF13606.8, score=44.8]; PDZ domain [PF00595.26, score=41.6]; PDZ domain [PF17820.3, score=36.7]; N-terminal or F0 domain of Talin-head FERM [PF16511.7, score=23.8]; PDZ domain [PF13180.8, score=19.7]} {Human: ENSG00000251322, SHANK3, SH3 and multiple ankyrin repeat domains 3, [RH, Score=346, Expect=1e-103]; ENSG00000283243, SHANK3, SH3 and multiple ankyrin repeat domains 3, [RH, Score=346, Expect=1e-103]} {Mouse: ENSMUSG00000022623, Shank3, SH3 and multiple ankyrin repeat domains 3, [RH, Score=342, Expect=3e-102]; ENSMUSG00000037541, Shank2, SH3 and multiple ankyrin repeat domains 2, [RH, Score=325, Expect=2e-96]; ENSMUSG00000038738, Shank1, SH3 and multiple ankyrin repeat domains 1, [RH, Score=325, Expect=2e-96]} {Dmel: FBgn0040752, Prosap, [RH, Score=380, Expect=8e-116]} {Celegans: WBGene00006444, shn-1, SHaNk (SH3/ankyrin domain scaffold protein) related, [Score=315, Expect=6e-96]} {Smed: dd_Smed_v6_4371_0_1, dd_Smed_v6_4371_0_1, [RH, Score=417, Expect=6e-135]} {RNA1509_11929, RNA1509_12279, RNA1509_5286} {RNA1310_5766, RNA1509_11929, RNA1509_12279} {RNA1509_11929, RNA1509_12279, RNA815_2909} Mlig455_066648 {REF} {Length: 1068} {Human: ENSG00000283243, SHANK3, SH3 and multiple ankyrin repeat domains 3, [Score=91.3, Expect=3e-22]; ENSG00000251322, SHANK3, SH3 and multiple ankyrin repeat domains 3, [Score=90.9, Expect=3e-22]; ENSG00000161681, SHANK1, SH3 and multiple ankyrin repeat domains 1, [Score=87.0, Expect=8e-21]} {Mouse: ENSMUSG00000022623, Shank3, SH3 and multiple ankyrin repeat domains 3, [Score=93.2, Expect=4e-23]} {Dmel: FBgn0040752, Prosap, [Score=108, Expect=1e-28]} {Celegans: WBGene00006444, shn-1, SHaNk (SH3/ankyrin domain scaffold protein) related, [Score=90.5, Expect=2e-22]} {Smed: dd_Smed_v6_7862_0_1, dd_Smed_v6_7862_0_1, [Score=99.4, Expect=1e-25]} {RNA1509_5286} {RNA1310_5766} {RNA815_18299} |
| 5. | MligTC455_34742 | 1520 | 31.66 | Mlig455_024395 | Neo: - Age: - |
ETFB | 0.961 | - | - | - | 0.961 | - | - | Mlig455_024395 {REF} {Length: 1309} {TRANSSPLICED} {Pfam: Electron transfer flavoprotein domain [PF01012.23, score=144.8]} {Human: ENSG00000105379, ETFB, electron transfer flavoprotein subunit beta, [Score=286, Expect=7e-98]} {Mouse: ENSMUSG00000004610, Etfb, electron transferring flavoprotein, beta polypeptide, [Score=282, Expect=2e-96]} {Dmel: FBgn0039697, CG7834, [Score=281, Expect=2e-96]} {Celegans: WBGene00017734, F23C8.5, [Score=258, Expect=3e-87]} {Smed: dd_Smed_v6_1315_0_1, dd_Smed_v6_1315_0_1, [Score=303, Expect=4e-105]} {RNA1509_1293, RNA1509_2752} {RNA1310_37760.1, RNA1509_2752} {RNA1509_2752, RNA815_17048} |
| 6. | MligTC455_13254 | 255 | 5.31 | Mlig455_000419, Mlig455_024863 | Neo: - Age: Down-Down-Up Region-enriched R5: 2.435/0.02078 |
PRMT5 | 0.957 | - | - | - | 0.957 | - | - | Mlig455_000419 {REF} {Length: 2743} {Pfam: PRMT5 TIM barrel domain [PF17285.4, score=103.6]} {Human: ENSG00000100462, PRMT5, protein arginine methyltransferase 5, [Score=103, Expect=4e-25]} {Mouse: ENSMUSG00000023110, Prmt5, protein arginine N-methyltransferase 5, [Score=101, Expect=1e-24]} {Dmel: FBgn0015925, csul, capsuleen, [Score=58.2, Expect=9e-10]} {Celegans: WBGene00016408, prmt-5, Protein arginine N-methyltransferase 5, [Score=49.7, Expect=5e-07]} {RNA1509_6180} {RNA1310_7540.1} {RNA815_6900} Mlig455_024863 {REF} {Length: 2669} {TRANSSPLICED} {Pfam: PRMT5 arginine-N-methyltransferase [PF05185.18, score=193.6]; PRMT5 TIM barrel domain [PF17285.4, score=192.6]; PRMT5 oligomerisation domain [PF17286.4, score=155.4]} {Human: ENSG00000100462, PRMT5, protein arginine methyltransferase 5, [RH, Score=525, Expect=5e-179]} {Mouse: ENSMUSG00000023110, Prmt5, protein arginine N-methyltransferase 5, [RH, Score=518, Expect=4e-176]} {Dmel: FBgn0015925, csul, capsuleen, [RH, Score=360, Expect=2e-115]} {Celegans: WBGene00016408, prmt-5, Protein arginine N-methyltransferase 5, [RH, Score=288, Expect=8e-87]} {Smed: dd_Smed_v6_8688_0_1, dd_Smed_v6_8688_0_1, [RH, Score=466, Expect=6e-156]} {RNA1509_6180} {RNA1310_7540.1} {RNA815_6900} |
| 7. | MligTC455_44799 | 1254 | 26.12 | Mlig455_063760 | Neo: - Age: - |
MEST | 0.957 | - | - | - | 0.957 | - | - | Mlig455_063760 {REF} {Length: 1770} {TRANSSPLICED} {Pfam: Alpha/beta hydrolase family [PF12697.9, score=48.4]; alpha/beta hydrolase fold [PF00561.22, score=44.8]; Serine aminopeptidase, S33 [PF12146.10, score=32.6]} {Human: ENSG00000106484, MEST, mesoderm specific transcript, [RH, Score=113, Expect=4e-28]} {Mouse: ENSMUSG00000051855, Mest, mesoderm specific transcript, [RH, Score=114, Expect=2e-28]} {RNA1509_17233, RNA1509_29667, RNA1509_51421, RNA1509_59650, RNA1509_9916} {RNA1310_16921, RNA1509_17233, RNA1509_29667, RNA1509_51421, RNA1509_59650, RNA1509_9916} {RNA1509_17233, RNA1509_29667, RNA1509_51421, RNA1509_59650, RNA1509_9916, RNA815_7250.1} |