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Results for MligTC455_39785

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_39785 826 17.21 Mlig455_060611, Mlig455_066648

Neo: -

Age: -

Region-enriched R4: 1.206/0.01983

SHANK3

Mlig455_060611 {REF} {Length: 6123} {TRANSSPLICED} {tRNA: Arg(ACG), score=72.3} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=80.8]; Ankyrin repeats (3 copies) [PF12796.9, score=78.2]; Ankyrin repeats (many copies) [PF13857.8, score=58.9]; Ankyrin repeat [PF00023.32, score=51.1]; Ankyrin repeat [PF13606.8, score=44.8]; PDZ domain [PF00595.26, score=41.6]; PDZ domain [PF17820.3, score=36.7]; N-terminal or F0 domain of Talin-head FERM [PF16511.7, score=23.8]; PDZ domain [PF13180.8, score=19.7]} {Human: ENSG00000251322, SHANK3, SH3 and multiple ankyrin repeat domains 3, [RH, Score=346, Expect=1e-103]; ENSG00000283243, SHANK3, SH3 and multiple ankyrin repeat domains 3, [RH, Score=346, Expect=1e-103]} {Mouse: ENSMUSG00000022623, Shank3, SH3 and multiple ankyrin repeat domains 3, [RH, Score=342, Expect=3e-102]; ENSMUSG00000037541, Shank2, SH3 and multiple ankyrin repeat domains 2, [RH, Score=325, Expect=2e-96]; ENSMUSG00000038738, Shank1, SH3 and multiple ankyrin repeat domains 1, [RH, Score=325, Expect=2e-96]} {Dmel: FBgn0040752, Prosap, [RH, Score=380, Expect=8e-116]} {Celegans: WBGene00006444, shn-1, SHaNk (SH3/ankyrin domain scaffold protein) related, [Score=315, Expect=6e-96]} {Smed: dd_Smed_v6_4371_0_1, dd_Smed_v6_4371_0_1, [RH, Score=417, Expect=6e-135]} {RNA1509_11929, RNA1509_12279, RNA1509_5286} {RNA1310_5766, RNA1509_11929, RNA1509_12279} {RNA1509_11929, RNA1509_12279, RNA815_2909}

Mlig455_066648 {REF} {Length: 1068} {Human: ENSG00000283243, SHANK3, SH3 and multiple ankyrin repeat domains 3, [Score=91.3, Expect=3e-22]; ENSG00000251322, SHANK3, SH3 and multiple ankyrin repeat domains 3, [Score=90.9, Expect=3e-22]; ENSG00000161681, SHANK1, SH3 and multiple ankyrin repeat domains 1, [Score=87.0, Expect=8e-21]} {Mouse: ENSMUSG00000022623, Shank3, SH3 and multiple ankyrin repeat domains 3, [Score=93.2, Expect=4e-23]} {Dmel: FBgn0040752, Prosap, [Score=108, Expect=1e-28]} {Celegans: WBGene00006444, shn-1, SHaNk (SH3/ankyrin domain scaffold protein) related, [Score=90.5, Expect=2e-22]} {Smed: dd_Smed_v6_7862_0_1, dd_Smed_v6_7862_0_1, [Score=99.4, Expect=1e-25]} {RNA1509_5286} {RNA1310_5766} {RNA815_18299}

Cumulative graph for MligTC455_39785

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.169 4.482 0.85674 1.00000
RegionR2 -0.397 4.482 0.36414 0.75884
RegionR3 0.225 4.482 0.50008 0.99478
RegionR4 1.206 4.482 0.00229 0.01983
RegionR5 -0.002 4.482 0.99502 1.00000
RegionR6 0.213 4.482 0.53649 1.00000
RegionR7 -0.425 4.482 0.34320 0.98028
RegionR8 -0.652 4.482 0.23890 0.85504

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -7.279 4.482 0.05916 0.72600
RegenerationR2 -0.583 4.482 0.13559 0.56274
RegenerationR3 -0.485 4.482 0.22787 0.66330
RegenerationR4 -1.009 4.482 0.01430 0.18728
RegenerationR5 0.184 4.482 0.62933 0.92238
RegenerationR6 -0.61 4.482 0.14215 0.46187
RegenerationBL -0.268 4.482 0.59578 0.94427
RegenerationTP -0.155 4.482 0.77391 1.00000


Genes with expression patterns similar to MligTC455_39785

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_39785 826 17.21 Mlig455_060611, Mlig455_066648

Neo: -

Age: -

Region-enriched R4: 1.206/0.01983

SHANK3 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_060611 {REF} {Length: 6123} {TRANSSPLICED} {tRNA: Arg(ACG), score=72.3} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=80.8]; Ankyrin repeats (3 copies) [PF12796.9, score=78.2]; Ankyrin repeats (many copies) [PF13857.8, score=58.9]; Ankyrin repeat [PF00023.32, score=51.1]; Ankyrin repeat [PF13606.8, score=44.8]; PDZ domain [PF00595.26, score=41.6]; PDZ domain [PF17820.3, score=36.7]; N-terminal or F0 domain of Talin-head FERM [PF16511.7, score=23.8]; PDZ domain [PF13180.8, score=19.7]} {Human: ENSG00000251322, SHANK3, SH3 and multiple ankyrin repeat domains 3, [RH, Score=346, Expect=1e-103]; ENSG00000283243, SHANK3, SH3 and multiple ankyrin repeat domains 3, [RH, Score=346, Expect=1e-103]} {Mouse: ENSMUSG00000022623, Shank3, SH3 and multiple ankyrin repeat domains 3, [RH, Score=342, Expect=3e-102]; ENSMUSG00000037541, Shank2, SH3 and multiple ankyrin repeat domains 2, [RH, Score=325, Expect=2e-96]; ENSMUSG00000038738, Shank1, SH3 and multiple ankyrin repeat domains 1, [RH, Score=325, Expect=2e-96]} {Dmel: FBgn0040752, Prosap, [RH, Score=380, Expect=8e-116]} {Celegans: WBGene00006444, shn-1, SHaNk (SH3/ankyrin domain scaffold protein) related, [Score=315, Expect=6e-96]} {Smed: dd_Smed_v6_4371_0_1, dd_Smed_v6_4371_0_1, [RH, Score=417, Expect=6e-135]} {RNA1509_11929, RNA1509_12279, RNA1509_5286} {RNA1310_5766, RNA1509_11929, RNA1509_12279} {RNA1509_11929, RNA1509_12279, RNA815_2909}

Mlig455_066648 {REF} {Length: 1068} {Human: ENSG00000283243, SHANK3, SH3 and multiple ankyrin repeat domains 3, [Score=91.3, Expect=3e-22]; ENSG00000251322, SHANK3, SH3 and multiple ankyrin repeat domains 3, [Score=90.9, Expect=3e-22]; ENSG00000161681, SHANK1, SH3 and multiple ankyrin repeat domains 1, [Score=87.0, Expect=8e-21]} {Mouse: ENSMUSG00000022623, Shank3, SH3 and multiple ankyrin repeat domains 3, [Score=93.2, Expect=4e-23]} {Dmel: FBgn0040752, Prosap, [Score=108, Expect=1e-28]} {Celegans: WBGene00006444, shn-1, SHaNk (SH3/ankyrin domain scaffold protein) related, [Score=90.5, Expect=2e-22]} {Smed: dd_Smed_v6_7862_0_1, dd_Smed_v6_7862_0_1, [Score=99.4, Expect=1e-25]} {RNA1509_5286} {RNA1310_5766} {RNA815_18299}
2. MligTC455_44799 1254 26.12 Mlig455_063760

Neo: -

Age: -

MEST 1.781 - - - 0.960 0.821 - Mlig455_063760 {REF} {Length: 1770} {TRANSSPLICED} {Pfam: Alpha/beta hydrolase family [PF12697.9, score=48.4]; alpha/beta hydrolase fold [PF00561.22, score=44.8]; Serine aminopeptidase, S33 [PF12146.10, score=32.6]} {Human: ENSG00000106484, MEST, mesoderm specific transcript, [RH, Score=113, Expect=4e-28]} {Mouse: ENSMUSG00000051855, Mest, mesoderm specific transcript, [RH, Score=114, Expect=2e-28]} {RNA1509_17233, RNA1509_29667, RNA1509_51421, RNA1509_59650, RNA1509_9916} {RNA1310_16921, RNA1509_17233, RNA1509_29667, RNA1509_51421, RNA1509_59650, RNA1509_9916} {RNA1509_17233, RNA1509_29667, RNA1509_51421, RNA1509_59650, RNA1509_9916, RNA815_7250.1}
3. MligTC455_04257 1951 40.65 Mlig455_051547

Neo: -

Age: logFC(26M/2M)=0.395

1.763 - - - 0.955 - 0.808 Mlig455_051547 {REF} {Length: 1477} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF1295) [PF06966.14, score=155.4]; 3-oxo-5-alpha-steroid 4-dehydrogenase [PF02544.18, score=20.9]} {Dmel: FBgn0035914, CG6282, [Score=125, Expect=4e-34]} {Smed: dd_Smed_v6_14327_0_1, dd_Smed_v6_14327_0_1, [Score=129, Expect=1e-35]} {RNA1509_8618} {RNA1310_22044, RNA1509_8618} {RNA1509_8618, RNA815_9497.1}
4. MligTC455_42271 1246 25.97 Mlig455_008840, Mlig455_008941

Neo: -

Age: -

Region-enriched R5: 1.156/0.02438

PGPEP1 1.753 - - - 0.952 0.801 -

Mlig455_008840 {REF} {Length: 2675} {TRANSSPLICED} {Pfam: Pyroglutamyl peptidase [PF01470.19, score=60.7]} {Human: ENSG00000130517, PGPEP1, pyroglutamyl-peptidase I, [RH, Score=102, Expect=2e-26]} {Mouse: ENSMUSG00000056204, Pgpep1, pyroglutamyl-peptidase I, [RH, Score=101, Expect=2e-26]} {Celegans: WBGene00010858, M04C9.3, [RH, Score=82.8, Expect=1e-19]} {Smed: dd_Smed_v6_6468_0_1, dd_Smed_v6_6468_0_1, [RH, Score=87.4, Expect=2e-21]} {RNA1509_47016} {RNA1310_22856} {RNA815_10452}

Mlig455_008941 {REF} {Length: 2548} {TRANSSPLICED} {Pfam: Pyroglutamyl peptidase [PF01470.19, score=60.9]} {Human: ENSG00000130517, PGPEP1, pyroglutamyl-peptidase I, [RH, Score=101, Expect=4e-26]} {Mouse: ENSMUSG00000056204, Pgpep1, pyroglutamyl-peptidase I, [RH, Score=100, Expect=5e-26]} {Celegans: WBGene00010858, M04C9.3, [RH, Score=81.6, Expect=3e-19]} {Smed: dd_Smed_v6_6468_0_1, dd_Smed_v6_6468_0_1, [RH, Score=86.3, Expect=4e-21]} {RNA1509_15512, RNA1509_35772, RNA1509_47016, RNA1509_47085} {RNA1310_22856, RNA1509_15512, RNA1509_35772, RNA1509_47016, RNA1509_47085} {RNA1509_15512, RNA1509_35772, RNA1509_47016, RNA1509_47085, RNA815_10452}
5. MligTC455_28526 593 12.36 Mlig455_056211, Mlig455_056221

Neo: -

Age: -

Region-enriched R4: 2.101/0.03632
Region-enriched R5: 1.897/0.01233

OCA2 0.962 - - - 0.962 - -

Mlig455_056211 {REF} {Length: 5739} {Pfam: Citrate transporter [PF03600.18, score=173.5]; Metallopeptidase family M24 [PF00557.26, score=104.5]; Sodium:sulfate symporter transmembrane region [PF00939.21, score=57.9]; C-terminal region of peptidase_M24 [PF16188.7, score=47.6]; Arsenical pump membrane protein [PF02040.17, score=19.4]} {Human: ENSG00000104044, OCA2, OCA2 melanosomal transmembrane protein, [RH, Score=596, Expect=0.0]} {Mouse: ENSMUSG00000030450, Oca2, oculocutaneous albinism II, [RH, Score=585, Expect=0.0]} {Dmel: FBgn0041150, hoe1, hoepel1, [RH, Score=540, Expect=7e-175]} {Celegans: WBGene00000155, app-1, Xaa-Pro aminopeptidase app-1, [Score=172, Expect=8e-45]} {Smed: dd_Smed_v6_5800_0_1, dd_Smed_v6_5800_0_1, [RH, Score=652, Expect=0.0]} {RNA1509_12085} {RNA1310_6295.2} {RNA815_1356.1}

Mlig455_056221 {REF} {Length: 7398} {Pfam: Citrate transporter [PF03600.18, score=113.0]; Metallopeptidase family M24 [PF00557.26, score=107.5]; Creatinase/Prolidase N-terminal domain [PF16189.7, score=73.5]; Creatinase/Prolidase N-terminal domain [PF01321.20, score=53.3]; C-terminal region of peptidase_M24 [PF16188.7, score=47.7]; Arsenical pump membrane protein [PF02040.17, score=20.6]; Dicarboxylate carrier protein MatC N-terminus [PF07158.13, score=19.0]} {Human: ENSG00000277361, OCA2, OCA2 melanosomal transmembrane protein, [Score=330, Expect=2e-97]; ENSG00000104044, OCA2, OCA2 melanosomal transmembrane protein, [Score=329, Expect=3e-96]} {Mouse: ENSMUSG00000030450, Oca2, oculocutaneous albinism II, [Score=320, Expect=2e-93]} {Dmel: FBgn0041150, hoe1, hoepel1, [Score=278, Expect=4e-79]} {Celegans: WBGene00000155, app-1, Xaa-Pro aminopeptidase app-1, [Score=217, Expect=1e-59]} {Smed: dd_Smed_v6_5800_0_1, dd_Smed_v6_5800_0_1, [Score=348, Expect=8e-105]} {RNA1509_12085, RNA1509_56882} {RNA1310_6295.2, RNA1509_56882} {RNA1509_56882, RNA815_1356.1}

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