TomoSeq data search

Data search

Results for MligTC455_28613

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_28613

1140

23.75

Mlig455_020535

Neo: -

Age: -

KIFAP3

Mlig455_020535 {REF} {Length: 627} {Pfam: Kinesin-associated protein (KAP) [PF05804.14, score=455.0]; SAP domain [PF02037.29, score=21.9]} {Human: ENSG00000075945, KIFAP3, kinesin associated protein 3, [Score=367, Expect=2e-116]} {Mouse: ENSMUSG00000026585, Kifap3, kinesin-associated protein 3, [Score=364, Expect=1e-114]} {Dmel: FBgn0028421, Kap3, Kinesin associated protein 3, [RH, Score=288, Expect=5e-85]} {Celegans: WBGene00002182, kap-1, Kinesin associated protein kap-1; Kinesin-Associated Protein, [Score=170, Expect=2e-44]} {Smed: dd_Smed_v6_4094_0_2, dd_Smed_v6_4094_0_2, [Score=408, Expect=2e-131]} {RNA1509_2219} {RNA1310_1880.1} {RNA815_617.1}

Cumulative graph for MligTC455_28613

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.849	4.774	0.35761	1.00000
RegionR2	0.984	4.774	0.02527	0.17786
RegionR3	0.449	4.774	0.22298	0.76458
RegionR4	0.092	4.774	0.82834	1.00000
RegionR5	-0.609	4.774	0.10193	0.30899
RegionR6	-0.274	4.774	0.48958	1.00000
RegionR7	-0.104	4.774	0.82915	1.00000
RegionR8	0.31	4.774	0.57413	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.299	4.774	0.22023	0.95502
RegenerationR2	-0.058	4.774	0.88376	1.00000
RegenerationR3	-0.229	4.774	0.60344	0.90936
RegenerationR4	-0.161	4.774	0.72510	0.96327
RegenerationR5	0.235	4.774	0.59600	0.90853
RegenerationR6	-0.116	4.774	0.80568	0.98010
RegenerationBL	-0.069	4.774	0.88797	1.00000
RegenerationTP	-0.505	4.774	0.34631	0.78794

Genes with expression patterns similar to MligTC455_28613

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_28613	1140	23.75	Mlig455_020535	Neo: - Age: -	KIFAP3	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_020535 {REF} {Length: 627} {Pfam: Kinesin-associated protein (KAP) [PF05804.14, score=455.0]; SAP domain [PF02037.29, score=21.9]} {Human: ENSG00000075945, KIFAP3, kinesin associated protein 3, [Score=367, Expect=2e-116]} {Mouse: ENSMUSG00000026585, Kifap3, kinesin-associated protein 3, [Score=364, Expect=1e-114]} {Dmel: FBgn0028421, Kap3, Kinesin associated protein 3, [RH, Score=288, Expect=5e-85]} {Celegans: WBGene00002182, kap-1, Kinesin associated protein kap-1; Kinesin-Associated Protein, [Score=170, Expect=2e-44]} {Smed: dd_Smed_v6_4094_0_2, dd_Smed_v6_4094_0_2, [Score=408, Expect=2e-131]} {RNA1509_2219} {RNA1310_1880.1} {RNA815_617.1}
2.	MligTC455_28524	1043	21.72	Mlig455_046600	Neo: - Age: logFC(26M/2M)=-0.185	PDXDC1	2.662	-	-	0.879	0.967	-	0.816	Mlig455_046600 {REF} {Length: 4710} {TRANSSPLICED} {Pfam: Pyridoxal-dependent decarboxylase conserved domain [PF00282.21, score=48.8]} {Human: ENSG00000275498, PDXDC1, pyridoxal dependent decarboxylase domain containing 1, [Score=149, Expect=3e-36]; ENSG00000179889, PDXDC1, pyridoxal dependent decarboxylase domain containing 1, [Score=149, Expect=3e-36]; ENSG00000276709, PDXDC1, pyridoxal dependent decarboxylase domain containing 1, [Score=145, Expect=2e-36]} {Mouse: ENSMUSG00000022680, Pdxdc1, pyridoxal-dependent decarboxylase domain containing 1, [Score=146, Expect=1e-35]} {Dmel: FBgn0031174, CG1486, [RH, Score=107, Expect=2e-23]} {Celegans: WBGene00007593, C14H10.3, [RH, Score=107, Expect=2e-23]} {Smed: dd_Smed_v6_8663_0_1, dd_Smed_v6_8663_0_1, [RH, Score=290, Expect=6e-85]} {RNA1509_57468, RNA1509_7244} {RNA1310_4258.1, RNA1509_57468, RNA1509_7244} {RNA1509_57468, RNA1509_7244, RNA815_1517}
3.	MligTC455_47160	747	15.56	Mlig455_021750	Neo: - Age: logFC(26M/2M)=-0.246	FAM184A	2.646	-	-	0.790	0.966	-	0.890	Mlig455_021750 {REF} {Length: 3705} {Pfam: Family with sequence similarity 184, A and B [PF15665.7, score=130.1]} {Human: ENSG00000111879, FAM184A, family with sequence similarity 184 member A, [RH, Score=340, Expect=5e-99]} {Mouse: ENSMUSG00000019856, Fam184a, family with sequence similarity 184, member A, [RH, Score=308, Expect=7e-88]} {Celegans: WBGene00001328, epi-1, Laminin-like protein epi-1, [Score=60.8, Expect=5e-09]} {Smed: dd_Smed_v6_16975_0_1, dd_Smed_v6_16975_0_1, [RH, Score=264, Expect=3e-73]} {RNA1509_5806} {RNA1310_3258.1, RNA1509_5806} {RNA1509_5806, RNA815_936}
4.	MligTC455_28521	992	20.67	Mlig455_046502	Neo: - Age: -		2.623	-	-	0.862	0.956	-	0.805	Mlig455_046502 {REF} {Length: 2752} {Dmel: FBgn0031174, CG1486, [Score=81.3, Expect=3e-17]} {Celegans: WBGene00007593, C14H10.3, [Score=87.4, Expect=3e-19]} {Smed: dd_Smed_v6_8663_0_1, dd_Smed_v6_8663_0_1, [Score=84.0, Expect=3e-18]} {RNA1509_19144} {RNA1310_30735} {RNA815_1517}
5.	MligTC455_36789	1321	27.51	Mlig455_018585	Neo: - Age: Down-Up-Up	PARG	2.536	-	0.806	-	0.965	-	0.765	Mlig455_018585 {REF} {Length: 2171} {TRANSSPLICED} {Pfam: Poly (ADP-ribose) glycohydrolase (PARG) [PF05028.16, score=283.6]; CCR4-NOT transcription complex subunit 1 HEAT repeat [PF16418.7, score=18.9]} {Human: ENSG00000227345, PARG, poly(ADP-ribose) glycohydrolase, [Score=170, Expect=4e-45]} {Mouse: ENSMUSG00000021911, Parg, poly (ADP-ribose) glycohydrolase, [Score=169, Expect=4e-47]} {Dmel: FBgn0023216, Parg, Poly(ADP-ribose) glycohydrolase, [Score=181, Expect=7e-50]} {Celegans: WBGene00004051, parg-1, Poly(ADP-ribose) glycohydrolase 1, [Score=106, Expect=2e-24]} {Smed: dd_Smed_v6_8617_0_1, dd_Smed_v6_8617_0_1, [Score=169, Expect=4e-47]} {RNA1509_56170, RNA1509_6060} {RNA1310_11688.1, RNA1509_56170, RNA1509_6060} {RNA1509_56170, RNA1509_6060, RNA815_4093}
6.	MligTC455_08021	293	6.1	Mlig455_038321, Mlig455_050216	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.467		2.493	-	-	0.814	0.726	0.953	-	Mlig455_038321 {REF} {Length: 3145} {RNA1509_37284} {RNA1310_20751} {RNA815_26670} Mlig455_050216 {REF} {Length: 2542} {RNA1509_37284} {RNA1310_20751} {RNA815_41422}
7.	MligTC455_46564	403	8.4	Mlig455_040238	Neo: - Age: -		2.471	-	-	0.720	0.952	-	0.799	Mlig455_040238 {REF} {Length: 3013} {RNA1509_9486} {RNA1310_9854} {RNA815_15545}
8.	MligTC455_23575	2369	49.35	Mlig455_028178, Mlig455_028250	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.258	MORN1	1.888	-	-	-	0.963	-	0.925	Mlig455_028178 {REF} {Length: 1943} {Smed: dd_Smed_v6_9195_0_2, dd_Smed_v6_9195_0_2, [Score=47.0, Expect=7e-06]} {RNA1509_6782} {RNA1310_12404} {RNA815_4642} Mlig455_028250 {REF} {Length: 4470} {Pfam: MORN repeat [PF02493.22, score=113.6]} {Human: ENSG00000116151, MORN1, MORN repeat containing 1, [RH, Score=248, Expect=2e-75]} {Mouse: ENSMUSG00000029049, Morn1, MORN repeat containing 1, [RH, Score=226, Expect=1e-67]} {Dmel: FBgn0034281, CG14490, [Score=72.4, Expect=2e-14]} {Smed: dd_Smed_v6_9195_0_1, dd_Smed_v6_9195_0_1, [RH, Score=259, Expect=3e-80]} {RNA1509_6782} {RNA1310_12404} {RNA815_4642}
9.	MligTC455_23574	1043	21.72	Mlig455_028179	Neo: - Age: -		1.869	-	-	-	0.952	-	0.917	Mlig455_028179 {REF} {Length: 1770} {RNA1509_19086} {RNA1310_31262} {RNA815_21154}
10.	MligTC455_53961	290	6.04	Mlig455_051313	Neo: - Age: logFC(26M/2M)=-0.591 Region-enriched R2: 2.488/0.02898	TTLL7	1.788	-	-	0.828	0.960	-	-	Mlig455_051313 {REF} {Length: 3404} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=247.2]; Sugar-transfer associated ATP-grasp [PF14397.8, score=21.8]; YheC/D like ATP-grasp [PF14398.8, score=18.8]} {Human: ENSG00000137941, TTLL7, tubulin tyrosine ligase like 7, [RH, Score=478, Expect=1e-157]} {Mouse: ENSMUSG00000036745, Ttll7, tubulin tyrosine ligase-like family, member 7, [RH, Score=474, Expect=2e-153]} {Dmel: FBgn0039501, CG5987, [Score=289, Expect=2e-85]} {Celegans: WBGene00019230, ttll-11, Tubulin Tyrosine Ligase Like, [Score=184, Expect=5e-49]} {Smed: dd_Smed_v6_13600_0_1, dd_Smed_v6_13600_0_1, [RH, Score=408, Expect=4e-128]} {RNA1509_8901} {RNA1310_4651, RNA1509_8901} {RNA1509_8901, RNA815_1757}
11.	MligTC455_43176	1391	28.98	Mlig455_031202	Neo: - Age: -		1.742	-	-	-	0.950	-	0.792	Mlig455_031202 {REF} {Length: 1602} {tRNA: Val(CAC),pseudo, score=27.7} {RNA1509_5906} {RNA1310_10573} {RNA815_3643}
12.	MligTC455_10544	100	2.09	Mlig455_046282	Neo: - Age: Down-Down-Up	RIOK3	0.973	-	-	-	-	0.973	-	Mlig455_046282 {REF} {Length: 1830} {TRANSSPLICED} {Pfam: RIO1 family [PF01163.24, score=78.6]} {Human: ENSG00000101782, RIOK3, RIO kinase 3, [Score=216, Expect=4e-63]} {Mouse: ENSMUSG00000024404, Riok3, RIO kinase 3, [Score=221, Expect=4e-65]} {Dmel: FBgn0031643, CG3008, [Score=152, Expect=2e-39]} {Celegans: WBGene00014012, riok-3, Serine/threonine-protein kinase RIO3, [Score=107, Expect=1e-24]} {RNA1509_19648} {RNA1310_14682} {RNA815_16143}
13.	MligTC455_31747	4603	95.89	Mlig455_020372	Neo: - Age: logFC(26M/2M)=-0.254	PCCA	0.957	-	-	-	-	-	0.957	Mlig455_020372 {REF} {Length: 2927} {TRANSSPLICED} {Pfam: Carbamoyl-phosphate synthase L chain, ATP binding domain [PF02786.19, score=273.4]; Biotin carboxylase, N-terminal domain [PF00289.24, score=146.3]; Biotin carboxylase C-terminal domain [PF02785.21, score=118.3]; Propionyl-coenzyme A carboxylase BT domain [PF18140.3, score=67.3]; Biotin-requiring enzyme [PF00364.24, score=57.2]; Biotin-lipoyl like [PF13533.8, score=37.1]; D-ala D-ala ligase C-terminus [PF07478.15, score=33.8]; ATP-grasp domain [PF02222.24, score=29.9]; RimK-like ATP-grasp domain [PF08443.13, score=23.8]; ATP-grasp domain [PF02655.16, score=21.1]} {Human: ENSG00000175198, PCCA, propionyl-CoA carboxylase subunit alpha, [RH, Score=845, Expect=0.0]} {Mouse: ENSMUSG00000041650, Pcca, propionyl-Coenzyme A carboxylase, alpha polypeptide, [RH, Score=861, Expect=0.0]} {Dmel: FBgn0039877, CG2118, [Score=457, Expect=2e-151]} {Celegans: WBGene00017864, pcca-1, Propionyl-CoA carboxylase alpha chain, mitochondrial, [RH, Score=823, Expect=0.0]} {Smed: dd_Smed_v6_1247_0_1, dd_Smed_v6_1247_0_1, [RH, Score=1032, Expect=0.0]} {RNA1509_275} {RNA1310_9293.1, RNA1509_275} {RNA1509_275, RNA815_1830.1}
14.	MligTC455_31748	4554	94.87	Mlig455_020432	Neo: - Age: -	PCCA	0.956	-	-	-	-	-	0.956	Mlig455_020432 {REF} {Length: 2931} {TRANSSPLICED} {Pfam: Carbamoyl-phosphate synthase L chain, ATP binding domain [PF02786.19, score=272.9]; Biotin carboxylase, N-terminal domain [PF00289.24, score=146.4]; Biotin carboxylase C-terminal domain [PF02785.21, score=118.5]; Propionyl-coenzyme A carboxylase BT domain [PF18140.3, score=67.1]; Biotin-requiring enzyme [PF00364.24, score=57.8]; Biotin-lipoyl like [PF13533.8, score=37.6]; D-ala D-ala ligase C-terminus [PF07478.15, score=33.2]; ATP-grasp domain [PF02222.24, score=29.6]; RimK-like ATP-grasp domain [PF08443.13, score=23.5]; ATP-grasp domain [PF02655.16, score=20.7]} {Human: ENSG00000175198, PCCA, propionyl-CoA carboxylase subunit alpha, [RH, Score=846, Expect=0.0]} {Mouse: ENSMUSG00000041650, Pcca, propionyl-Coenzyme A carboxylase, alpha polypeptide, [RH, Score=861, Expect=0.0]} {Dmel: FBgn0039877, CG2118, [Score=456, Expect=4e-151]} {Celegans: WBGene00017864, pcca-1, Propionyl-CoA carboxylase alpha chain, mitochondrial, [RH, Score=830, Expect=0.0]} {Smed: dd_Smed_v6_1247_0_1, dd_Smed_v6_1247_0_1, [RH, Score=1027, Expect=0.0]} {RNA1509_275, RNA1509_3750} {RNA1310_9293.1, RNA1509_3750} {RNA1509_3750, RNA815_1830.1}
15.	MligTC455_45113	1515	31.56	Mlig455_057086	Neo: - Age: logFC(26M/2M)=-0.355	ANXA11	0.955	-	-	-	0.955	-	-	Mlig455_057086 {REF} {Length: 3442} {TRANSSPLICED} {Pfam: Annexin [PF00191.22, score=301.4]; Fn3 associated [PF13287.8, score=27.5]; Chitobiase/beta-hexosaminidase C-terminal domain [PF13290.8, score=22.1]} {Human: ENSG00000122359, ANXA11, annexin A11, [RH, Score=329, Expect=3e-104]; ENSG00000196975, ANXA4, annexin A4, [RH, Score=327, Expect=2e-105]} {Mouse: ENSMUSG00000021866, Anxa11, annexin A11, [RH, Score=325, Expect=3e-102]; ENSMUSG00000029994, Anxa4, annexin A4, [RH, Score=321, Expect=3e-103]} {Dmel: FBgn0030749, AnxB11, Annexin B11, [RH, Score=312, Expect=2e-97]} {Celegans: WBGene00003589, nex-2, Annexin, [RH, Score=289, Expect=2e-89]} {Smed: dd_Smed_v6_5798_0_1, dd_Smed_v6_5798_0_1, [RH, Score=699, Expect=0.0]} {RNA1509_3059, RNA1509_32629, RNA1509_40060, RNA1509_59218, RNA1509_6187, RNA1509_8995} {RNA1310_4049, RNA1509_3059, RNA1509_32629, RNA1509_40060, RNA1509_59218, RNA1509_6187, RNA1509_8995} {RNA1509_3059, RNA1509_32629, RNA1509_40060, RNA1509_59218, RNA1509_6187, RNA1509_8995, RNA815_1608.1}
16.	MligTC455_34333	29	0.59	Mlig455_005256	Neo: - Age: -	NKX3-2	0.952	-	-	-	-	0.952	-	Mlig455_005256 {REF} {Length: 1971} {Pfam: Homeodomain [PF00046.31, score=68.8]} {Human: ENSG00000109705, NKX3-2, NK3 homeobox 2, [RH, Score=119, Expect=3e-29]} {Mouse: ENSMUSG00000049691, Nkx3-2, NK3 homeobox 2, [RH, Score=119, Expect=2e-29]} {Dmel: FBgn0004862, bap, bagpipe, [RH, Score=115, Expect=5e-28]} {Celegans: WBGene00003377, mls-2, Mesodermal Lineage Specification, [Score=89.7, Expect=2e-19]} {Smed: dd_Smed_v6_34285_0_1, dd_Smed_v6_34285_0_1, [RH, Score=94.0, Expect=4e-23]}
17.	MligTC455_34332	28	0.59	Mlig455_005058	Neo: - Age: -	NKX3-2	0.951	-	-	-	-	0.951	-	Mlig455_005058 {REF} {Length: 1884} {Pfam: Homeodomain [PF00046.31, score=68.8]} {Human: ENSG00000109705, NKX3-2, NK3 homeobox 2, [RH, Score=118, Expect=4e-29]} {Mouse: ENSMUSG00000049691, Nkx3-2, NK3 homeobox 2, [RH, Score=118, Expect=2e-29]} {Dmel: FBgn0004862, bap, bagpipe, [RH, Score=115, Expect=7e-28]} {Celegans: WBGene00003377, mls-2, Mesodermal Lineage Specification, [Score=90.9, Expect=7e-20]} {Smed: dd_Smed_v6_34285_0_1, dd_Smed_v6_34285_0_1, [RH, Score=94.0, Expect=4e-23]}

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