M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_31748

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_31748 4554 94.87 Mlig455_020432

Neo: -

Age: -

 PCCA Mlig455_020432 {REF} {Length: 2931} {TRANSSPLICED} {Pfam: Carbamoyl-phosphate synthase L chain, ATP binding domain [PF02786.19, score=272.9]; Biotin carboxylase, N-terminal domain [PF00289.24, score=146.4]; Biotin carboxylase C-terminal domain [PF02785.21, score=118.5]; Propionyl-coenzyme A carboxylase BT domain [PF18140.3, score=67.1]; Biotin-requiring enzyme [PF00364.24, score=57.8]; Biotin-lipoyl like [PF13533.8, score=37.6]; D-ala D-ala ligase C-terminus [PF07478.15, score=33.2]; ATP-grasp domain [PF02222.24, score=29.6]; RimK-like ATP-grasp domain [PF08443.13, score=23.5]; ATP-grasp domain [PF02655.16, score=20.7]} {Human: ENSG00000175198, PCCA, propionyl-CoA carboxylase subunit alpha, [RH, Score=846, Expect=0.0]} {Mouse: ENSMUSG00000041650, Pcca, propionyl-Coenzyme A carboxylase, alpha polypeptide, [RH, Score=861, Expect=0.0]} {Dmel: FBgn0039877, CG2118, [Score=456, Expect=4e-151]} {Celegans: WBGene00017864, pcca-1, Propionyl-CoA carboxylase alpha chain, mitochondrial, [RH, Score=830, Expect=0.0]} {Smed: dd_Smed_v6_1247_0_1, dd_Smed_v6_1247_0_1, [RH, Score=1027, Expect=0.0]} {RNA1509_275, RNA1509_3750} {RNA1310_9293.1, RNA1509_3750} {RNA1509_3750, RNA815_1830.1}

Cumulative graph for MligTC455_31748

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.414 6.688 0.44653 1.00000
RegionR2 0.457 6.688 0.06859 0.31847
RegionR3 0.003 6.688 0.98812 1.00000
RegionR4 0.814 6.688 0.00098 0.01025
RegionR5 0.093 6.688 0.63864 0.99116
RegionR6 -0.386 6.688 0.07920 0.52043
RegionR7 -0.242 6.688 0.34964 0.98641
RegionR8 -0.326 6.688 0.32267 0.95631

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.384 6.688 0.60976 1.00000
RegenerationR2 0.46 6.688 0.03897 0.32617
RegenerationR3 0.058 6.688 0.81391 0.98603
RegenerationR4 -0.313 6.688 0.21631 0.66354
RegenerationR5 0.063 6.688 0.78931 0.98498
RegenerationR6 0.614 6.688 0.01386 0.14502
RegenerationBL -0.033 6.688 0.90302 1.00000
RegenerationTP -0.621 6.688 0.04713 0.35793


Genes with expression patterns similar to MligTC455_31748

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_31748 4554 94.87 Mlig455_020432

Neo: -

Age: -

 PCCA 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_020432 {REF} {Length: 2931} {TRANSSPLICED} {Pfam: Carbamoyl-phosphate synthase L chain, ATP binding domain [PF02786.19, score=272.9]; Biotin carboxylase, N-terminal domain [PF00289.24, score=146.4]; Biotin carboxylase C-terminal domain [PF02785.21, score=118.5]; Propionyl-coenzyme A carboxylase BT domain [PF18140.3, score=67.1]; Biotin-requiring enzyme [PF00364.24, score=57.8]; Biotin-lipoyl like [PF13533.8, score=37.6]; D-ala D-ala ligase C-terminus [PF07478.15, score=33.2]; ATP-grasp domain [PF02222.24, score=29.6]; RimK-like ATP-grasp domain [PF08443.13, score=23.5]; ATP-grasp domain [PF02655.16, score=20.7]} {Human: ENSG00000175198, PCCA, propionyl-CoA carboxylase subunit alpha, [RH, Score=846, Expect=0.0]} {Mouse: ENSMUSG00000041650, Pcca, propionyl-Coenzyme A carboxylase, alpha polypeptide, [RH, Score=861, Expect=0.0]} {Dmel: FBgn0039877, CG2118, [Score=456, Expect=4e-151]} {Celegans: WBGene00017864, pcca-1, Propionyl-CoA carboxylase alpha chain, mitochondrial, [RH, Score=830, Expect=0.0]} {Smed: dd_Smed_v6_1247_0_1, dd_Smed_v6_1247_0_1, [RH, Score=1027, Expect=0.0]} {RNA1509_275, RNA1509_3750} {RNA1310_9293.1, RNA1509_3750} {RNA1509_3750, RNA815_1830.1}
2. MligTC455_31747 4603 95.89 Mlig455_020372

Neo: -

Age: logFC(26M/2M)=-0.254

 PCCA 5.986 1.000 1.000 1.000 0.987 1.000 0.999 Mlig455_020372 {REF} {Length: 2927} {TRANSSPLICED} {Pfam: Carbamoyl-phosphate synthase L chain, ATP binding domain [PF02786.19, score=273.4]; Biotin carboxylase, N-terminal domain [PF00289.24, score=146.3]; Biotin carboxylase C-terminal domain [PF02785.21, score=118.3]; Propionyl-coenzyme A carboxylase BT domain [PF18140.3, score=67.3]; Biotin-requiring enzyme [PF00364.24, score=57.2]; Biotin-lipoyl like [PF13533.8, score=37.1]; D-ala D-ala ligase C-terminus [PF07478.15, score=33.8]; ATP-grasp domain [PF02222.24, score=29.9]; RimK-like ATP-grasp domain [PF08443.13, score=23.8]; ATP-grasp domain [PF02655.16, score=21.1]} {Human: ENSG00000175198, PCCA, propionyl-CoA carboxylase subunit alpha, [RH, Score=845, Expect=0.0]} {Mouse: ENSMUSG00000041650, Pcca, propionyl-Coenzyme A carboxylase, alpha polypeptide, [RH, Score=861, Expect=0.0]} {Dmel: FBgn0039877, CG2118, [Score=457, Expect=2e-151]} {Celegans: WBGene00017864, pcca-1, Propionyl-CoA carboxylase alpha chain, mitochondrial, [RH, Score=823, Expect=0.0]} {Smed: dd_Smed_v6_1247_0_1, dd_Smed_v6_1247_0_1, [RH, Score=1032, Expect=0.0]} {RNA1509_275} {RNA1310_9293.1, RNA1509_275} {RNA1509_275, RNA815_1830.1}
3. MligTC455_30436 247 5.16 Mlig455_005917, Mlig455_007902, Mlig455_028139

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.855

 2.58 - - 0.820 - 0.963 0.797

Mlig455_005917 {REF} {Length: 1826} {RNA1509_50227} {RNA1310_7741.2} {RNA815_2064.1}

Mlig455_007902 {REF} {Length: 6338} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=29.0]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=27.9]} {RNA1509_25737} {RNA1310_2048} {RNA815_551.1}

Mlig455_028139 {REF} {Length: 2097} {RNA1509_50227} {RNA1310_7741.2} {RNA815_2064.1}
4. MligTC455_22762 328 6.84 Mlig455_036232

Neo: -

Age: logFC(26M/2M)=0.467

 ELOVL4 2.501 - - 0.789 - 0.960 0.752 Mlig455_036232 {REF} {Length: 1770} {TRANSSPLICED} {Pfam: GNS1/SUR4 family [PF01151.20, score=205.6]} {Human: ENSG00000118402, ELOVL4, ELOVL fatty acid elongase 4, [RH, Score=308, Expect=2e-104]} {Mouse: ENSMUSG00000032262, Elovl4, elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4, [RH, Score=304, Expect=5e-103]} {Dmel: FBgn0052072, Elo68alpha, Elongase 68alpha, [RH, Score=214, Expect=2e-68]} {Celegans: WBGene00001245, elo-7, Elongation of very long chain fatty acids protein, [Score=81.3, Expect=1e-17]} {Smed: dd_Smed_v6_7835_0_1, dd_Smed_v6_7835_0_1, [Score=308, Expect=2e-105]} {RNA1509_11261} {RNA1310_21427.1} {RNA815_6649.1}
5. MligTC455_23501 375 7.81 Mlig455_002930

Neo: -

Age: logFC(26M/2M)=-0.247

 TTLL7 2.45 - - 0.704 - 0.968 0.778 Mlig455_002930 {REF} {Length: 5279} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=228.6]; YheC/D like ATP-grasp [PF14398.8, score=25.0]; Sugar-transfer associated ATP-grasp [PF14397.8, score=24.5]; ATP-grasp domain [PF02655.16, score=20.1]} {Human: ENSG00000137941, TTLL7, tubulin tyrosine ligase like 7, [Score=335, Expect=4e-99]; ENSG00000170703, TTLL6, tubulin tyrosine ligase like 6, [Score=319, Expect=3e-91]} {Mouse: ENSMUSG00000036745, Ttll7, tubulin tyrosine ligase-like family, member 7, [Score=328, Expect=1e-94]} {Dmel: FBgn0039501, CG5987, [Score=248, Expect=4e-69]} {Celegans: WBGene00019230, ttll-11, Tubulin Tyrosine Ligase Like, [Score=153, Expect=7e-38]} {Smed: dd_Smed_v6_13600_0_1, dd_Smed_v6_13600_0_1, [Score=276, Expect=4e-77]} {RNA1509_34152} {RNA1310_1361, RNA1509_34152} {RNA1509_34152, RNA815_278.1}
6. MligTC455_46255 2218 46.21 Mlig455_024833

Neo: -

Age: logFC(26M/2M)=-0.329

 CASC1 1.872 - - - - 0.903 0.969 Mlig455_024833 {REF} {Length: 2822} {Pfam: Cancer susceptibility candidate 1 N-terminus [PF15927.7, score=170.2]; Cancer susceptibility candidate 1 C-terminal [PF12366.10, score=30.7]} {Human: ENSG00000118307, CASC1, cancer susceptibility 1, [RH, Score=319, Expect=1e-97]} {Mouse: ENSMUSG00000043541, Casc1, cancer susceptibility candidate 1, [RH, Score=293, Expect=5e-88]} {Dmel: FBgn0030889, CG15373, [RH, Score=82.4, Expect=8e-16]} {Smed: dd_Smed_v6_11291_0_1, dd_Smed_v6_11291_0_1, [RH, Score=521, Expect=7e-175]} {RNA1509_1842} {RNA1310_6962.1} {RNA815_2139}
7. MligTC455_23642 573 11.93 Mlig455_069008

Neo: -

Age: logFC(26M/2M)=0.738

 ACTB 1.848 - - - - 0.960 0.888 Mlig455_069008 {REF} {Length: 2243} {Pfam: Actin [PF00022.21, score=267.5]; Protein kinase domain [PF00069.27, score=203.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=134.6]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=20.5]} {Human: ENSG00000075624, ACTB, actin beta, [Score=417, Expect=3e-141]; ENSG00000184009, ACTG1, actin gamma 1, [Score=417, Expect=5e-141]; ENSG00000107796, ACTA2, actin, alpha 2, smooth muscle, aorta, [Score=404, Expect=4e-136]; ENSG00000163017, ACTG2, actin, gamma 2, smooth muscle, enteric, [Score=404, Expect=5e-136]; ENSG00000159251, ACTC1, actin, alpha, cardiac muscle 1, [Score=403, Expect=2e-135]; ENSG00000169067, ACTBL2, actin, beta like 2, [Score=401, Expect=9e-135]; ENSG00000143632, ACTA1, actin, alpha 1, skeletal muscle, [Score=400, Expect=1e-134]} {Mouse: ENSMUSG00000062825, Actg1, actin, gamma, cytoplasmic 1, [Score=417, Expect=4e-141]; ENSMUSG00000029580, Actb, actin, beta, [Score=417, Expect=2e-141]; ENSMUSG00000035783, Acta2, actin, alpha 2, smooth muscle, aorta, [Score=404, Expect=2e-136]; ENSMUSG00000059430, Actg2, actin, gamma 2, smooth muscle, enteric, [Score=404, Expect=4e-136]; ENSMUSG00000055194, Actbl2, actin, beta-like 2, [Score=404, Expect=5e-136]; ENSMUSG00000068614, Actc1, actin, alpha, cardiac muscle 1, [Score=403, Expect=1e-135]; ENSMUSG00000031972, Acta1, actin, alpha 1, skeletal muscle, [Score=400, Expect=8e-135]} {Dmel: FBgn0000042, Act5C, Actin 5C, [Score=417, Expect=3e-141]} {Celegans: WBGene00000064, act-2, Actin-2, [Score=418, Expect=6e-142]} {Smed: dd_Smed_v6_3_0_1, dd_Smed_v6_3_0_1, [Score=419, Expect=4e-142]} {RNA1509_28185} {RNA1310_11665} {RNA815_6928}
8. MligTC455_46254 1114 23.21 Mlig455_000448

Neo: -

Age: -

 CASC1 1.828 - - - - 0.862 0.966 Mlig455_000448 {REF} {Length: 3104} {Pfam: Cancer susceptibility candidate 1 N-terminus [PF15927.7, score=168.4]; Cancer susceptibility candidate 1 C-terminal [PF12366.10, score=29.2]} {Human: ENSG00000118307, CASC1, cancer susceptibility 1, [RH, Score=320, Expect=4e-98]} {Mouse: ENSMUSG00000043541, Casc1, cancer susceptibility candidate 1, [RH, Score=295, Expect=2e-88]} {Dmel: FBgn0030889, CG15373, [RH, Score=83.6, Expect=4e-16]} {Smed: dd_Smed_v6_11291_0_1, dd_Smed_v6_11291_0_1, [RH, Score=521, Expect=7e-175]} {RNA1509_1842} {RNA1310_6962.1, RNA1509_1842} {RNA1509_1842, RNA815_2139}
9. MligTC455_49595 1965 40.94 Mlig455_063367

Neo: -

Age: logFC(26M/2M)=-0.273

 ARMC4 1.823 - - - 0.868 0.955 - Mlig455_063367 {REF} {Length: 3512} {TRANSSPLICED} {Pfam: Armadillo/beta-catenin-like repeat [PF00514.25, score=35.8]} {Human: ENSG00000169126, ARMC4, armadillo repeat containing 4, [Score=268, Expect=1e-79]} {Mouse: ENSMUSG00000061802, Armc4, armadillo repeat containing 4, [Score=268, Expect=5e-80]} {Dmel: FBgn0031905, gudu, [Score=136, Expect=3e-34]} {Smed: dd_Smed_v6_5065_0_1, dd_Smed_v6_5065_0_1, [Score=224, Expect=9e-66]} {RNA1509_13521, RNA1509_19449, RNA1509_28862, RNA1509_7449} {RNA1310_2954.1, RNA1509_13521, RNA1509_19449, RNA1509_28862, RNA1509_7449} {RNA1509_13521, RNA1509_19449, RNA1509_28862, RNA1509_7449, RNA815_1045}
10. MligTC455_48023 1581 32.94 Mlig455_059813, Mlig455_061497

Neo: -

Age: -

 1.816 - - - - 0.841 0.975

Mlig455_059813 {REF} {Length: 1348} {Pfam: SPATIAL [PF15256.8, score=42.6]} {RNA1509_36901} {RNA1310_27867} {RNA815_22701}

Mlig455_061497 {REF} {Length: 1463} {Pfam: SPATIAL [PF15256.8, score=48.2]} {Dmel: FBgn0261793, Trf2, TATA box binding protein-related factor 2, [Score=65.1, Expect=3e-10]} {RNA1509_36901} {RNA1310_27867, RNA1509_36901} {RNA1509_36901, RNA815_17643}
11. MligTC455_53842 1222 25.46 Mlig455_023890

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.345

Region-enriched R2: 1.546/0.01667

 1.786 - - - - 0.957 0.829 Mlig455_023890 {REF} {Length: 1336} {RNA1509_15580} {RNA1310_22487.1} {RNA815_10676.1}
12. MligTC455_22760 1202 25.04 Mlig455_005448

Neo: -

Age: -

 ELOVL4 1.703 - - - - 0.955 0.748 Mlig455_005448 {REF} {Length: 1604} {TRANSSPLICED} {Pfam: GNS1/SUR4 family [PF01151.20, score=208.1]} {Human: ENSG00000118402, ELOVL4, ELOVL fatty acid elongase 4, [Score=284, Expect=2e-95]} {Mouse: ENSMUSG00000032262, Elovl4, elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4, [Score=281, Expect=7e-95]} {Dmel: FBgn0052072, Elo68alpha, Elongase 68alpha, [Score=204, Expect=3e-65]} {Celegans: WBGene00001244, elo-6, Elongation of very long chain fatty acids protein 6, [Score=81.6, Expect=4e-18]} {Smed: dd_Smed_v6_7835_0_1, dd_Smed_v6_7835_0_1, [Score=286, Expect=2e-97]} {RNA1509_11261} {RNA1310_21427.2} {RNA815_6649.1}
13. MligTC455_25936 273 5.68 Mlig455_037036

Neo: -

Age: Up-Down-Down

 KIAA1841 1.684 - - - - 0.952 0.732 Mlig455_037036 {REF} {Length: 2749} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF3342) [PF11822.10, score=118.5]} {Human: ENSG00000162929, KIAA1841, KIAA1841, [Score=322, Expect=6e-99]} {Mouse: ENSMUSG00000042208, 0610010F05Rik, RIKEN cDNA 0610010F05 gene, [Score=380, Expect=5e-121]} {Dmel: FBgn0036031, CG6761, [Score=203, Expect=1e-54]} {Smed: dd_Smed_v6_11436_0_1, dd_Smed_v6_11436_0_1, [Score=335, Expect=1e-104]} {RNA1509_18348} {RNA1310_9169} {RNA815_752.1}
14. MligTC455_01405 72 1.51 Mlig455_040777

Neo: -

Age: -

 0.975 - - - - 0.975 - Mlig455_040777 {REF} {Length: 274} {NoTransDecoderORF} {RNA1509_34939} {RNA1310_613.1} {RNA815_5431}
15. MligTC455_23564 1404 29.25 Mlig455_012182

Neo: -

Age: logFC(26M/2M)=-0.411

 0.974 - - - - 0.974 - Mlig455_012182 {REF} {Length: 3676} {Smed: dd_Smed_v6_10823_0_1, dd_Smed_v6_10823_0_1, [RH, Score=164, Expect=4e-41]} {RNA1509_54958} {RNA1310_4804} {RNA815_699}
16. MligTC455_53472 864 17.99 Mlig455_062449

Neo: -

Age: logFC(26M/2M)=-0.311

 CFAP65 0.971 - - - - 0.971 - Mlig455_062449 {REF} {Length: 5820} {Pfam: Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin [PF15780.7, score=92.3]; MSP (Major sperm protein) domain [PF00635.28, score=45.2]; Transmembrane protein 131-like N-terminal [PF12371.10, score=24.9]; Protein of unknown function (DUF1573) [PF07610.13, score=23.0]} {Human: ENSG00000181378, CFAP65, cilia and flagella associated protein 65, [RH, Score=850, Expect=0.0]} {Mouse: ENSMUSG00000047021, Cfap65, cilia and flagella associated protein 65, [RH, Score=842, Expect=0.0]} {Smed: dd_Smed_v6_12428_0_1, dd_Smed_v6_12428_0_1, [RH, Score=1277, Expect=0.0]} {RNA1509_19700, RNA1509_38302, RNA1509_57456} {RNA1310_760, RNA1509_38302, RNA1509_57456} {RNA1509_38302, RNA1509_57456, RNA815_222.1}
17. MligTC455_03037 319 6.64 Mlig455_058181, Mlig455_058205

Neo: -

Age: Down-Up-Up

 FAM126A 0.968 - - - - 0.968 -

Mlig455_058181 {REF} {Length: 1804} {TRANSSPLICED} {Pfam: Hyccin [PF09790.11, score=125.7]} {Human: ENSG00000122591, FAM126A, family with sequence similarity 126 member A, [RH, Score=80.5, Expect=7e-16]} {Mouse: ENSMUSG00000038174, Fam126b, family with sequence similarity 126, member B, [Score=86.3, Expect=1e-17]} {Dmel: FBgn0034269, CG6406, [RH, Score=97.4, Expect=1e-21]} {Celegans: WBGene00017037, D1069.3, [Score=51.6, Expect=7e-07]} {RNA1509_44354} {RNA1310_17018} {RNA815_37064}

Mlig455_058205 {REF} {Length: 1804} {TRANSSPLICED} {Pfam: Hyccin [PF09790.11, score=125.7]} {Human: ENSG00000122591, FAM126A, family with sequence similarity 126 member A, [RH, Score=80.5, Expect=7e-16]} {Mouse: ENSMUSG00000038174, Fam126b, family with sequence similarity 126, member B, [Score=86.3, Expect=1e-17]} {Dmel: FBgn0034269, CG6406, [RH, Score=97.4, Expect=1e-21]} {Celegans: WBGene00017037, D1069.3, [Score=51.6, Expect=7e-07]} {RNA1509_44354} {RNA1310_17018, RNA1509_44354} {RNA1509_44354, RNA815_37064}
18. MligTC455_12553 207 4.31 Mlig455_039172

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.629

 0.963 - - - - 0.963 - Mlig455_039172 {REF} {Length: 1710} {Pfam: WSC domain [PF01822.21, score=101.1]; F5/8 type C domain [PF00754.27, score=57.4]; Clip-domain serine protease homolog Scarface [PF18399.3, score=25.3]} {Celegans: WBGene00005024, sqv-6, Xylosyltransferase sqv-6, [Score=49.7, Expect=4e-06]} {Smed: dd_Smed_v6_2342_0_1, dd_Smed_v6_2342_0_1, [Score=58.2, Expect=3e-09]} {RNA1509_17809} {RNA1310_28139} {RNA815_13563}
19. MligTC455_45917 870 18.12 Mlig455_035395

Neo: -

Age: -

 0.963 - - - - - 0.963 Mlig455_035395 {REF} {Length: 384} {NoTransDecoderORF} {RNA1509_13458} {RNA1310_34859} {RNA815_24075}
20. MligTC455_30343 1276 26.59 Mlig455_006443, Mlig455_009214, Mlig455_016332, Mlig455_046228, Mlig455_058013, Mlig455_060674

Neo: -

Age: -

 SLC5A8 0.96 - - - - 0.960 -

Mlig455_006443 {REF} {Length: 2720} {Pfam: Sodium:solute symporter family [PF00474.19, score=70.7]} {Human: ENSG00000256870, SLC5A8, solute carrier family 5 member 8, [Score=246, Expect=9e-72]; ENSG00000262217, SLC5A8, solute carrier family 5 member 8, [Score=246, Expect=9e-72]} {Mouse: ENSMUSG00000020062, Slc5a8, solute carrier family 5 (iodide transporter), member 8, [Score=247, Expect=2e-72]} {Dmel: FBgn0034494, CG10444, [Score=222, Expect=2e-63]} {Celegans: WBGene00014092, ZK822.5, [Score=180, Expect=1e-48]} {Smed: dd_Smed_v6_14173_0_1, dd_Smed_v6_14173_0_1, [Score=240, Expect=2e-70]} {RNA1509_5005} {RNA1310_632} {RNA815_4301}

Mlig455_009214 {REF} {Length: 1994} {TRANSSPLICED} {RNA1509_5005} {RNA1310_632} {RNA815_4301}

Mlig455_016332 {REF} {Length: 1994} {TRANSSPLICED} {RNA1509_5005} {RNA1310_632} {RNA815_4301}

Mlig455_046228 {REF} {Length: 2702} {TRANSSPLICED} {RNA1509_5005} {RNA1310_632} {RNA815_4301}

Mlig455_058013 {REF} {Length: 4526} {TRANSSPLICED} {RNA1509_5005} {RNA1310_632} {RNA815_4301}

Mlig455_060674 {REF} {Length: 1994} {TRANSSPLICED} {RNA1509_5005} {RNA1310_632} {RNA815_4301}
21. MligTC455_33396 487 10.16 Mlig455_055919

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.313

Region-enriched R2: 2.574/0.00387

 DNAH1 0.959 - - - - - 0.959 Mlig455_055919 {REF} {Length: 12844} {Pfam: Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=520.4]; Dynein heavy chain, N-terminal region 2 [PF08393.15, score=433.6]; Dynein heavy chain C-terminal domain [PF18199.3, score=396.5]; P-loop containing dynein motor region D4 [PF12780.9, score=336.0]; ATP-binding dynein motor region [PF12781.9, score=305.8]; P-loop containing dynein motor region [PF12775.9, score=271.1]; Microtubule-binding stalk of dynein motor [PF12777.9, score=165.7]; Dynein heavy chain AAA lid domain [PF18198.3, score=161.1]; Dynein heavy chain region D6 P-loop domain [PF03028.17, score=155.0]; Dynein heavy chain AAA lid domain [PF17852.3, score=107.7]; AAA+ lid domain [PF17857.3, score=77.3]; AAA domain (dynein-related subfamily) [PF07728.16, score=73.8]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=35.9]; AAA domain [PF13238.8, score=29.9]; AAA domain [PF13401.8, score=28.7]; AAA ATPase domain [PF13191.8, score=20.5]; Magnesium chelatase, subunit ChlI [PF01078.23, score=19.7]; DEAD/DEAH box helicase [PF00270.31, score=18.8]; Type III restriction enzyme, res subunit [PF04851.17, score=18.8]} {Human: ENSG00000114841, DNAH1, dynein axonemal heavy chain 1, [RH, Score=5214, Expect=0.0]} {Mouse: ENSMUSG00000019027, Dnah1, dynein, axonemal, heavy chain 1, [RH, Score=5198, Expect=0.0]} {Dmel: FBgn0013810, Dhc36C, Dynein heavy chain at 36C, [Score=2866, Expect=0.0]} {Celegans: WBGene00000962, dhc-1, Dynein heavy chain, cytoplasmic, [Score=1304, Expect=0.0]} {Smed: dd_Smed_v6_6790_0_1, dd_Smed_v6_6790_0_1, [RH, Score=4107, Expect=0.0]} {RNA1509_1216} {RNA1310_62} {RNA815_116.1}
22. MligTC455_29073 88 1.84 Mlig455_029132, Mlig455_040198

Neo: -

Age: -

 0.957 - - - - 0.957 -

Mlig455_029132 {REF} {Length: 2937} {NoTransDecoderORF} {RNA1509_45811} {RNA1310_50362} {RNA815_3257.3}

Mlig455_040198 {REF} {Length: 1035} {NoTransDecoderORF} {RNA1509_25000} {RNA1310_4307.1} {RNA815_2326}
23. MligTC455_28613 1140 23.75 Mlig455_020535

Neo: -

Age: -

 KIFAP3 0.956 - - - - - 0.956 Mlig455_020535 {REF} {Length: 627} {Pfam: Kinesin-associated protein (KAP) [PF05804.14, score=455.0]; SAP domain [PF02037.29, score=21.9]} {Human: ENSG00000075945, KIFAP3, kinesin associated protein 3, [Score=367, Expect=2e-116]} {Mouse: ENSMUSG00000026585, Kifap3, kinesin-associated protein 3, [Score=364, Expect=1e-114]} {Dmel: FBgn0028421, Kap3, Kinesin associated protein 3, [RH, Score=288, Expect=5e-85]} {Celegans: WBGene00002182, kap-1, Kinesin associated protein kap-1; Kinesin-Associated Protein, [Score=170, Expect=2e-44]} {Smed: dd_Smed_v6_4094_0_2, dd_Smed_v6_4094_0_2, [Score=408, Expect=2e-131]} {RNA1509_2219} {RNA1310_1880.1} {RNA815_617.1}
24. MligTC455_51713 737 15.35 Mlig455_003554, Mlig455_015507

Neo: -

Age: logFC(26M/2M)=-0.192

 ANKAR 0.952 - - - - 0.952 -

Mlig455_003554 {REF} {Length: 5287} {TRANSSPLICED} {Pfam: Armadillo/beta-catenin-like repeat [PF00514.25, score=131.3]; Ankyrin repeats (3 copies) [PF12796.9, score=56.3]; HEAT repeats [PF13646.8, score=38.5]; Ankyrin repeats (many copies) [PF13637.8, score=34.3]; Ankyrin repeat [PF13606.8, score=29.9]; Spinocerebellar ataxia type 10 protein domain [PF09759.11, score=29.3]; Ankyrin repeats (many copies) [PF13857.8, score=27.3]; Ankyrin repeat [PF00023.32, score=24.0]; V-ATPase subunit H [PF11698.10, score=21.3]} {Human: ENSG00000151687, ANKAR, ankyrin and armadillo repeat containing, [Score=782, Expect=0.0]} {Mouse: ENSMUSG00000039342, Ankar, ankyrin and armadillo repeat containing, [Score=829, Expect=0.0]} {Dmel: FBgn0016920, nompC, no mechanoreceptor potential C, [Score=60.5, Expect=1e-08]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=61.2, Expect=7e-09]} {Smed: dd_Smed_v6_13064_0_1, dd_Smed_v6_13064_0_1, [Score=843, Expect=0.0]} {RNA1509_7218} {RNA1310_1159.1} {RNA815_584.1}

Mlig455_015507 {REF} {Length: 5025} {TRANSSPLICED} {Pfam: Armadillo/beta-catenin-like repeat [PF00514.25, score=141.1]; Ankyrin repeats (3 copies) [PF12796.9, score=61.3]; HEAT repeats [PF13646.8, score=45.1]; Ankyrin repeats (many copies) [PF13637.8, score=33.3]; Ankyrin repeat [PF13606.8, score=31.9]; Spinocerebellar ataxia type 10 protein domain [PF09759.11, score=29.0]; Ankyrin repeats (many copies) [PF13857.8, score=25.5]; V-ATPase subunit H [PF11698.10, score=25.0]; Ankyrin repeat [PF00023.32, score=24.8]; HEAT repeat [PF02985.24, score=21.2]} {Human: ENSG00000151687, ANKAR, ankyrin and armadillo repeat containing, [RH, Score=917, Expect=0.0]} {Mouse: ENSMUSG00000039342, Ankar, ankyrin and armadillo repeat containing, [RH, Score=917, Expect=0.0]} {Dmel: FBgn0016920, nompC, no mechanoreceptor potential C, [Score=61.2, Expect=8e-09]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=61.6, Expect=5e-09]} {Smed: dd_Smed_v6_13064_0_1, dd_Smed_v6_13064_0_1, [RH, Score=927, Expect=0.0]} {RNA1509_7218} {RNA1310_1159.1} {RNA815_584.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA