M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_28977

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_28977 735 15.30 Mlig455_000572, Mlig455_003191, Mlig455_003290, Mlig455_016496, Mlig455_022341, Mlig455_023424, Mlig455_023450, Mlig455_032331

Neo: -

Age: -

Region-enriched R4: 4.319/0.02249

Mlig455_000572 {REF} {Length: 460} {NoTransDecoderORF} {RNA1509_41508} {RNA1310_1800.1} {RNA815_49293}

Mlig455_003191 {REF} {Length: 879} {NoTransDecoderORF} {RNA1509_47311} {RNA1310_1800.1} {RNA815_49293}

Mlig455_003290 {REF} {Length: 984} {NoTransDecoderORF} {RNA1509_39623} {RNA1310_1800.1} {RNA815_49293}

Mlig455_016496 {REF} {Length: 959} {RNA1509_39623} {RNA1310_1800.1} {RNA815_49293}

Mlig455_022341 {REF} {Length: 1260} {NoTransDecoderORF} {RNA1509_39623} {RNA1310_1800.1} {RNA815_49293}

Mlig455_023424 {REF} {Length: 1153} {NoTransDecoderORF} {RNA1509_39623} {RNA1310_1800.1} {RNA815_49293}

Mlig455_023450 {REF} {Length: 1739} {RNA1509_39623} {RNA1310_1800.1} {RNA815_49293}

Mlig455_032331 {REF} {Length: 855} {NoTransDecoderORF} {RNA1509_47311} {RNA1310_1800.1} {RNA815_49293}

Cumulative graph for MligTC455_28977

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.228 4.225 0.99938 1.00000
RegionR2 0.043 4.225 0.70365 1.00000
RegionR3 -4.277 4.225 0.99985 1.00000
RegionR4 4.319 4.225 0.00269 0.02249
RegionR5 0.332 4.225 0.53542 0.89834
RegionR6 -0.561 4.225 0.80953 1.00000
RegionR7 2.287 4.225 0.06971 0.50695
RegionR8 2.085 4.225 0.21470 0.81904

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.394 4.225 0.77638 1.00000
RegenerationR2 3.959 4.225 0.00444 0.10276
RegenerationR3 5.481 4.225 0.00499 0.12704
RegenerationR4 -1.645 4.225 0.21391 0.66039
RegenerationR5 2.658 4.225 0.08136 0.44275
RegenerationR6 3.525 4.225 0.02677 0.20478
RegenerationBL 1.211 4.225 0.47210 0.83824
RegenerationTP 2.252 4.225 0.10895 0.50880


Genes with expression patterns similar to MligTC455_28977

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_28977 735 15.3 Mlig455_000572, Mlig455_003191, Mlig455_003290, Mlig455_016496, Mlig455_022341, Mlig455_023424, Mlig455_023450, Mlig455_032331

Neo: -

Age: -

Region-enriched R4: 4.319/0.02249

 5 1.000 - 1.000 1.000 1.000 1.000

Mlig455_000572 {REF} {Length: 460} {NoTransDecoderORF} {RNA1509_41508} {RNA1310_1800.1} {RNA815_49293}

Mlig455_003191 {REF} {Length: 879} {NoTransDecoderORF} {RNA1509_47311} {RNA1310_1800.1} {RNA815_49293}

Mlig455_003290 {REF} {Length: 984} {NoTransDecoderORF} {RNA1509_39623} {RNA1310_1800.1} {RNA815_49293}

Mlig455_016496 {REF} {Length: 959} {RNA1509_39623} {RNA1310_1800.1} {RNA815_49293}

Mlig455_022341 {REF} {Length: 1260} {NoTransDecoderORF} {RNA1509_39623} {RNA1310_1800.1} {RNA815_49293}

Mlig455_023424 {REF} {Length: 1153} {NoTransDecoderORF} {RNA1509_39623} {RNA1310_1800.1} {RNA815_49293}

Mlig455_023450 {REF} {Length: 1739} {RNA1509_39623} {RNA1310_1800.1} {RNA815_49293}

Mlig455_032331 {REF} {Length: 855} {NoTransDecoderORF} {RNA1509_47311} {RNA1310_1800.1} {RNA815_49293}
2. MligTC455_00600 63 1.31 Mlig455_053978

Neo: -

Age: -

 2.66 - - - 0.835 0.866 0.959 Mlig455_053978 {REF} {Length: 1009} {Pfam: Arenavirus nucleocapsid C-terminal domain [PF17290.4, score=18.2]} {RNA1509_1755} {RNA1310_2220.1} {RNA815_703.1}
3. MligTC455_27112 46 0.97 Mlig455_055117

Neo: -

Age: -

 2.469 - - 0.960 - 0.723 0.786 Mlig455_055117 {REF} {Length: 2142} {RNA1509_39623} {RNA1310_23482} {RNA815_21728.1}
4. MligTC455_01799 70 1.46 Mlig455_038552

Neo: -

Age: -

 1.866 - - - - 0.896 0.970 Mlig455_038552 {REF} {Length: 658} {NoTransDecoderORF} {RNA1509_6341} {RNA1310_13441.1} {RNA815_5624}
5. MligTC455_36065 889 18.53 Mlig455_014334, Mlig455_020356, Mlig455_031898, Mlig455_036772, Mlig455_060660

Neo: -

Age: -

 1.842 - - - - 0.952 0.890

Mlig455_014334 {REF} {Length: 1229} {Pfam: Integrase core domain [PF00665.28, score=28.6]} {Smed: dd_Smed_v6_11155_0_5, dd_Smed_v6_11155_0_5, [Score=59.3, Expect=7e-11]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}

Mlig455_020356 {REF} {Length: 6131} {Celegans: WBGene00016348, C33E10.6, [RH, Score=286, Expect=1e-84]} {Smed: dd_Smed_v6_9974_1_2, dd_Smed_v6_9974_1_2, [Score=300, Expect=3e-90]} {RNA1509_28643} {RNA1310_576.1} {RNA815_1671.1}

Mlig455_031898 {REF} {Length: 1129} {Pfam: Integrase core domain [PF00665.28, score=21.1]} {Smed: dd_Smed_v6_11155_0_2, dd_Smed_v6_11155_0_2, [Score=54.3, Expect=2e-10]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}

Mlig455_036772 {REF} {Length: 1339} {Pfam: Integrase core domain [PF00665.28, score=34.8]} {Smed: dd_Smed_v6_11155_0_1, dd_Smed_v6_11155_0_1, [Score=57.4, Expect=4e-10]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}

Mlig455_060660 {REF} {Length: 921} {Pfam: Integrase core domain [PF00665.28, score=33.9]} {Smed: dd_Smed_v6_11155_0_6, dd_Smed_v6_11155_0_6, [Score=56.6, Expect=6e-10]} {RNA1509_21400} {RNA1310_6101.1} {RNA815_23595}
6. MligTC455_29260 139 2.9 Mlig455_017645

Neo: -

Age: logFC(26M/2M)=0.941

 1.836 - - - - 0.976 0.860 Mlig455_017645 {REF} {Length: 9122} {Pfam: Zinc knuckle [PF00098.25, score=34.2]} {Celegans: WBGene00017210, F07E5.5, [Score=53.5, Expect=3e-07]} {RNA1509_9188} {RNA1310_234.1} {RNA815_23.1}
7. MligTC455_39722 41 0.85 Mlig455_032651

Neo: -

Age: -

 1.827 - - - - 0.867 0.960 Mlig455_032651 {REF} {Length: 1919} {NoTransDecoderORF} {RNA1310_65058}
8. MligTC455_21791 146 3.04 Mlig455_037983, Mlig455_037984, Mlig455_043778

Neo: -

Age: -

 1.823 - - - - 0.963 0.860

Mlig455_037983 {REF} {Length: 1364} {RNA1509_57867} {RNA1310_23482} {RNA815_21848}

Mlig455_037984 {REF} {Length: 285} {NoTransDecoderORF} {RNA1310_113608} {RNA815_318.1}

Mlig455_043778 {REF} {Length: 2487} {RNA1509_57867} {RNA1310_50534.1} {RNA815_318.1}
9. MligTC455_25940 29 0.6 Mlig455_003190

Neo: -

Age: -

 1.821 - - - - 0.962 0.859 Mlig455_003190 {REF} {Length: 606} {NoTransDecoderORF} {RNA1509_41508} {RNA1310_23482} {RNA815_49293}
10. MligTC455_29538 414 8.62 Mlig455_021292, Mlig455_032309, Mlig455_038966, Mlig455_045378, Mlig455_055116

Neo: -

Age: -

 1.818 - - - - 0.854 0.964

Mlig455_021292 {REF} {Length: 4416} {RNA1509_57867} {RNA1310_1374.1} {RNA815_23786}

Mlig455_032309 {REF} {Length: 1718} {RNA1509_57867} {RNA1310_1374.1} {RNA815_23786}

Mlig455_038966 {REF} {Length: 798} {NoTransDecoderORF} {RNA1509_57867} {RNA1310_1374.1} {RNA815_43995.1}

Mlig455_045378 {REF} {Length: 1053} {RNA1509_57867} {RNA1310_1374.1} {RNA815_43995.1}

Mlig455_055116 {REF} {Length: 1351} {RNA1509_57867} {RNA1310_1374.1} {RNA815_43995.1}
11. MligTC455_27069 73 1.53 Mlig455_069952

Neo: -

Age: -

 1.814 - - - - 0.977 0.837 Mlig455_069952 {REF} {Length: 529} {RNA1509_59553} {RNA1310_127391} {RNA815_64986}
12. MligTC455_12297 36 0.74 Mlig455_027069

Neo: -

Age: -

Regeneration-upregulated R2: 6.043

Regeneration-enriched R2: 6.043

 1.786 - - - 0.822 - 0.964 Mlig455_027069 {REF} {Length: 1928} {NoTransDecoderORF} {RNA1310_50186}
13. MligTC455_16749 454 9.45 Mlig455_001550, Mlig455_046548

Neo: -

Age: logFC(26M/2M)=0.515

Region-specific R2: 4.360

Region-enriched R2: 3.409/0.00015

 TRAF4 1.762 - - - - 0.792 0.970

Mlig455_001550 {REF} {Length: 4563} {Pfam: TRAF-type zinc finger [PF02176.20, score=81.2]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=27.3]; Seven in absentia protein family [PF03145.18, score=27.2]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=23.0]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=22.9]; zinc finger of C3HC4-type, RING [PF15227.8, score=20.4]; zf-RING of BARD1-type protein [PF14835.8, score=20.3]; Ring finger domain [PF13639.8, score=19.5]} {Human: ENSG00000076604, TRAF4, TNF receptor associated factor 4, [Score=237, Expect=4e-72]} {Mouse: ENSMUSG00000017386, Traf4, TNF receptor associated factor 4, [Score=241, Expect=7e-74]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [Score=164, Expect=1e-44]} {Celegans: WBGene00006612, trf-1, TNF Receptor Associated Factor (TRAF) homolog; TRF-1, [RH, Score=276, Expect=1e-87]} {Smed: dd_Smed_v6_13517_0_1, dd_Smed_v6_13517_0_1, [RH, Score=592, Expect=0.0]} {RNA1509_20900} {RNA1310_14813, RNA1509_20900} {RNA1509_20900, RNA815_2335.1}

Mlig455_046548 {REF} {Length: 3881} {Pfam: TRAF-type zinc finger [PF02176.20, score=81.2]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=27.3]; Seven in absentia protein family [PF03145.18, score=27.2]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=23.0]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=22.9]; zinc finger of C3HC4-type, RING [PF15227.8, score=20.4]; zf-RING of BARD1-type protein [PF14835.8, score=20.3]; Ring finger domain [PF13639.8, score=19.5]} {Human: ENSG00000076604, TRAF4, TNF receptor associated factor 4, [Score=236, Expect=1e-71]} {Mouse: ENSMUSG00000017386, Traf4, TNF receptor associated factor 4, [Score=240, Expect=3e-73]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [Score=164, Expect=9e-45]} {Celegans: WBGene00006612, trf-1, TNF Receptor Associated Factor (TRAF) homolog; TRF-1, [RH, Score=275, Expect=6e-87]} {Smed: dd_Smed_v6_13517_0_1, dd_Smed_v6_13517_0_1, [RH, Score=592, Expect=0.0]} {RNA1509_20900} {RNA1310_14813} {RNA815_2335.1}
14. MligTC455_30834 130 2.72 Mlig455_058052

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=1.183

 HDAC11 1.758 - - - - 0.964 0.794 Mlig455_058052 {REF} {Length: 12455} {Pfam: Histone deacetylase domain [PF00850.21, score=140.8]} {Human: ENSG00000163517, HDAC11, histone deacetylase 11, [Score=310, Expect=8e-103]} {Mouse: ENSMUSG00000034245, Hdac11, histone deacetylase 11, [Score=308, Expect=6e-102]} {Dmel: FBgn0051119, HDAC11, Histone deacetylase 11, [Score=263, Expect=2e-84]} {Celegans: WBGene00007953, hda-11, Histone DeAcetylase, [Score=225, Expect=3e-70]} {Smed: dd_Smed_v6_3401_0_4, dd_Smed_v6_3401_0_4, [Score=248, Expect=3e-79]} {RNA1509_12648} {RNA1310_37725.1} {RNA815_2054.1}
15. MligTC455_21792 120 2.5 Mlig455_019461, Mlig455_062164

Neo: -

Age: -

 1.755 - - - - 0.957 0.798

Mlig455_019461 {REF} {Length: 1989} {RNA1509_57867} {RNA1310_75051} {RNA815_43995.1}

Mlig455_062164 {REF} {Length: 1297} {RNA1509_57867} {RNA1310_23482} {RNA815_21848}
16. MligTC455_30269 148 3.09 Mlig455_050984

Neo: -

Age: -

 1.751 - - - 0.799 0.952 - Mlig455_050984 {REF} {Length: 3262} {Dmel: FBgn0036278, CrzR, Corazonin receptor, [Score=55.5, Expect=1e-09]} {RNA1509_5039} {RNA1310_3442.1} {RNA815_3500.1}
17. MligTC455_44020 185 3.86 Mlig455_010276

Neo: -

Age: Down-Up-Down

Region-enriched R2: 3.370/0.00096

 1.744 - - - - 0.785 0.959 Mlig455_010276 {REF} {Length: 864} {Pfam: Heat shock factor binding protein 1 [PF06825.14, score=31.1]; Baculovirus polyhedron envelope protein, PEP, C terminus [PF04513.14, score=19.8]; Uncharacterised protein family (UPF0184) [PF03670.15, score=19.0]} {RNA1310_71172} {RNA815_36466}
18. MligTC455_30830 115 2.39 Mlig455_028763

Neo: -

Age: logFC(26M/2M)=-0.683

 THAP1 1.743 - - - - 0.789 0.954 Mlig455_028763 {REF} {Length: 7616} {Pfam: THAP domain [PF05485.14, score=65.4]; Transposase protein [PF12017.10, score=48.2]} {Human: ENSG00000131931, THAP1, THAP domain containing 1, [RH, Score=79.7, Expect=3e-16]} {Mouse: ENSMUSG00000037214, Thap1, THAP domain containing, apoptosis associated protein 1, [RH, Score=79.7, Expect=2e-16]} {Dmel: FBgn0032730, CG10431, [Score=53.9, Expect=5e-07]} {RNA1509_56939} {RNA1310_2079.1} {RNA815_2452.1}
19. MligTC455_46952 43 0.9 Mlig455_031219

Neo: -

Age: -

Region-enriched R4: 5.444/0.03746

 1.737 - - 0.755 - - 0.982 Mlig455_031219 {REF} {Length: 735}
20. MligTC455_45496 144 2.99 Mlig455_010048

Neo: -

Age: Up-Down-Up

Region-enriched R2: 3.720/0.00332

 CAV2 1.733 - - - - 0.781 0.952 Mlig455_010048 {REF} {Length: 2607} {Pfam: Caveolin [PF01146.19, score=125.0]} {Human: ENSG00000105971, CAV2, caveolin 2, [Score=85.5, Expect=3e-21]} {Mouse: ENSMUSG00000000058, Cav2, caveolin 2, [Score=89.4, Expect=7e-23]} {Celegans: WBGene00000301, cav-1, Caveolin-1, [Score=79.0, Expect=2e-18]} {Smed: dd_Smed_v6_8555_0_1, dd_Smed_v6_8555_0_1, [RH, Score=153, Expect=1e-48]} {RNA1509_20287} {RNA1310_50581.1, RNA1509_20287} {RNA1509_20287, RNA815_31873}
21. MligTC455_42256 163 3.39 Mlig455_054046

Neo: -

Age: Down-Up-Up

 LDB2 1.71 - - - 0.757 - 0.953 Mlig455_054046 {REF} {Length: 2089} {Pfam: LIM-domain binding protein [PF01803.18, score=164.3]; LIM interaction domain (LID) [PF17916.3, score=55.5]} {Human: ENSG00000169744, LDB2, LIM domain binding 2, [RH, Score=390, Expect=4e-132]} {Mouse: ENSMUSG00000039706, Ldb2, LIM domain binding 2, [RH, Score=388, Expect=3e-131]} {Dmel: FBgn0013764, Chi, Chip, [RH, Score=332, Expect=9e-107]} {Celegans: WBGene00002261, ldb-1, F58A3.1a; LIM Domain Binding protein, [RH, Score=155, Expect=2e-40]} {Smed: dd_Smed_v6_3678_0_1, dd_Smed_v6_3678_0_1, [Score=321, Expect=1e-102]} {RNA1310_27326} {RNA815_22302}
22. MligTC455_21389 173 3.6 Mlig455_012718

Neo: -

Age: -

 SLC9B2 1.691 - - - 0.730 - 0.961 Mlig455_012718 {REF} {Length: 3209} {Pfam: Sodium/hydrogen exchanger family [PF00999.23, score=114.5]; Sodium/glutamate symporter [PF03616.16, score=18.4]} {Human: ENSG00000164038, SLC9B2, solute carrier family 9 member B2, [Score=320, Expect=3e-100]} {Mouse: ENSMUSG00000050150, Slc9b1, solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1, [RH, Score=303, Expect=5e-94]} {Dmel: FBgn0031865, Nha1, Na[+]/H[+] hydrogen antiporter 1, [Score=257, Expect=4e-75]} {Celegans: WBGene00009618, F41E7.2, [Score=136, Expect=9e-34]} {Smed: dd_Smed_v6_7736_0_2, dd_Smed_v6_7736_0_2, [RH, Score=359, Expect=2e-116]} {RNA1509_19376} {RNA1310_19487} {RNA815_52764}
23. MligTC455_27806 83 1.72 Mlig455_038041

Neo: -

Age: -

 MAP3K4 1.665 - - - - 0.950 0.715 Mlig455_038041 {REF} {Length: 3811} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=157.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=116.5]; Ankyrin repeats (3 copies) [PF12796.9, score=71.6]; Ankyrin repeats (many copies) [PF13637.8, score=54.4]; Ankyrin repeats (many copies) [PF13857.8, score=54.3]; Ankyrin repeat [PF00023.32, score=54.2]; Ankyrin repeat [PF13606.8, score=40.3]; Fungal protein kinase [PF17667.3, score=26.7]} {Human: ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=132, Expect=9e-31]; ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=129, Expect=6e-31]} {Mouse: ENSMUSG00000014426, Map3k4, mitogen-activated protein kinase kinase kinase 4, [Score=128, Expect=1e-29]; ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=123, Expect=4e-29]} {Dmel: FBgn0024329, Mekk1, [Score=123, Expect=3e-28]} {Celegans: WBGene00015646, mlt-10, [RH, Score=178, Expect=7e-47]} {Smed: dd_Smed_v6_3286_0_6, dd_Smed_v6_3286_0_6, [Score=112, Expect=3e-26]} {RNA1509_50870} {RNA1310_4206} {RNA815_5812}
24. MligTC455_38597 42 0.87 Mlig455_025025

Neo: -

Age: -

 1.657 - - 0.703 - 0.954 - Mlig455_025025 {REF} {Length: 836} {NoTransDecoderORF} {RNA1509_21228} {RNA1310_9218} {RNA815_7856.3}
25. MligTC455_40668 165 3.45 Mlig455_016268

Neo: -

Age: -

 0.978 - - - - 0.978 - Mlig455_016268 {REF} {Length: 794} {RNA1509_47841} {RNA1310_11055} {RNA815_24189}
26. MligTC455_51311 17 0.36 Mlig455_003546

Neo: -

Age: Up-Down-Down

 TRPC4 0.977 - - - - - 0.977 Mlig455_003546 {REF} {Length: 3667} {Human: ENSG00000133107, TRPC4, transient receptor potential cation channel subfamily C member 4, [Score=175, Expect=1e-48]} {Mouse: ENSMUSG00000027748, Trpc4, transient receptor potential cation channel, subfamily C, member 4, [Score=173, Expect=3e-48]; ENSMUSG00000041710, Trpc5, transient receptor potential cation channel, subfamily C, member 5, [Score=166, Expect=7e-46]} {Dmel: FBgn0032593, Trpgamma, Transient receptor potential cation channel gamma, [Score=210, Expect=2e-61]} {Celegans: WBGene00006615, trp-2, TRP (Transient receptor potential) channel family; TRP homlogous cation channel protein, [Score=131, Expect=5e-34]} {Smed: dd_Smed_v6_15627_0_2, dd_Smed_v6_15627_0_2, [Score=251, Expect=1e-79]} {RNA1509_39535} {RNA1310_51104} {RNA815_28901}
27. MligTC455_27203 178 3.7 Mlig455_056778

Neo: -

Age: -

Region-enriched R5: 2.470/0.02695

 ACTG1 0.976 - - - - - 0.976 Mlig455_056778 {REF} {Length: 10764} {Pfam: Actin [PF00022.21, score=469.5]; RIH domain [PF01365.23, score=52.7]; Integrase core domain [PF00665.28, score=48.1]; Inositol 1,4,5-trisphosphate/ryanodine receptor [PF08709.13, score=37.6]; MIR domain [PF02815.21, score=36.4]; RyR and IP3R Homology associated [PF08454.13, score=29.4]; Ion transport protein [PF00520.33, score=19.1]} {Human: ENSG00000184009, ACTG1, actin gamma 1, [Score=710, Expect=0.0]; ENSG00000075624, ACTB, actin beta, [Score=708, Expect=0.0]; ENSG00000107796, ACTA2, actin, alpha 2, smooth muscle, aorta, [Score=689, Expect=0.0]; ENSG00000159251, ACTC1, actin, alpha, cardiac muscle 1, [Score=689, Expect=0.0]; ENSG00000163017, ACTG2, actin, gamma 2, smooth muscle, enteric, [Score=689, Expect=0.0]; ENSG00000143632, ACTA1, actin, alpha 1, skeletal muscle, [Score=688, Expect=0.0]; ENSG00000169067, ACTBL2, actin, beta like 2, [Score=681, Expect=0.0]} {Mouse: ENSMUSG00000062825, Actg1, actin, gamma, cytoplasmic 1, [Score=710, Expect=0.0]; ENSMUSG00000029580, Actb, actin, beta, [Score=708, Expect=0.0]; ENSMUSG00000035783, Acta2, actin, alpha 2, smooth muscle, aorta, [Score=689, Expect=0.0]; ENSMUSG00000059430, Actg2, actin, gamma 2, smooth muscle, enteric, [Score=689, Expect=0.0]; ENSMUSG00000068614, Actc1, actin, alpha, cardiac muscle 1, [Score=689, Expect=0.0]; ENSMUSG00000031972, Acta1, actin, alpha 1, skeletal muscle, [Score=688, Expect=0.0]; ENSMUSG00000055194, Actbl2, actin, beta-like 2, [Score=687, Expect=0.0]} {Dmel: FBgn0000044, Act57B, Actin 57B, [Score=708, Expect=0.0]} {Celegans: WBGene00000065, act-3, Actin-1, [Score=711, Expect=0.0]} {Smed: dd_Smed_v6_3_0_1, dd_Smed_v6_3_0_1, [Score=702, Expect=0.0]} {RNA1509_59019} {RNA1310_34487} {RNA815_14388}
28. MligTC455_17138 283 5.89 Mlig455_029728

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.646

Region-specific R2: 4.824

Region-enriched R2: 5.583/0.00000

 LRRCC1 0.973 - - - - - 0.973 Mlig455_029728 {REF} {Length: 1372} {Pfam: Heat shock factor binding protein 1 [PF06825.14, score=68.1]; Leucine Rich repeats (2 copies) [PF12799.9, score=67.8]; Leucine rich repeat [PF13855.8, score=44.9]; Leucine-rich repeat [PF14580.8, score=35.0]; Leucine Rich repeat [PF13516.8, score=21.5]} {Human: ENSG00000133739, LRRCC1, leucine rich repeat and coiled-coil centrosomal protein 1, [RH, Score=402, Expect=3e-122]} {Mouse: ENSMUSG00000027550, Lrrcc1, leucine rich repeat and coiled-coil domain containing 1, [RH, Score=387, Expect=3e-117]} {Dmel: FBgn0032429, CG5446, [Score=66.6, Expect=3e-13]} {Celegans: WBGene00189952, K10D2.8, [Score=65.1, Expect=8e-11]} {Smed: dd_Smed_v6_10086_0_1, dd_Smed_v6_10086_0_1, [RH, Score=443, Expect=2e-139]} {RNA1509_31405, RNA1509_32465} {RNA1310_70756, RNA1509_31405, RNA1509_32465} {RNA1509_31405, RNA1509_32465, RNA815_37567}
29. MligTC455_43599 84 1.74 Mlig455_013639

Neo: -

Age: -

 0.973 - - - - - 0.973 Mlig455_013639 {REF} {Length: 530} {NoTransDecoderORF} {RNA1310_81577}
30. MligTC455_49763 130 2.72 Mlig455_006404

Neo: -

Age: -

Region-enriched R2: 3.029/0.02346

 KREMEN1 0.971 - - - - - 0.971 Mlig455_006404 {REF} {Length: 1879} {Pfam: WSC domain [PF01822.21, score=53.7]; PAN domain [PF00024.28, score=24.0]} {Human: ENSG00000183762, KREMEN1, kringle containing transmembrane protein 1, [Score=45.1, Expect=1e-05]} {Mouse: ENSMUSG00000020393, Kremen1, kringle containing transmembrane protein 1, [Score=44.7, Expect=1e-05]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=47.8, Expect=9e-07]} {RNA1509_53783} {RNA1310_43597} {RNA815_9084.2}
31. MligTC455_07100 97 2.02 Mlig455_003124, Mlig455_014179

Neo: -

Age: -

 POU4F1 0.97 - - - - - 0.970

Mlig455_003124 {REF} {Length: 2773} {Pfam: Pou domain - N-terminal to homeobox domain [PF00157.19, score=109.3]; Homeodomain [PF00046.31, score=67.1]; Helix-turn-helix domain [PF13560.8, score=22.0]} {Human: ENSG00000152192, POU4F1, POU class 4 homeobox 1, [RH, Score=271, Expect=6e-87]; ENSG00000151615, POU4F2, POU class 4 homeobox 2, [RH, Score=269, Expect=4e-86]; ENSG00000091010, POU4F3, POU class 4 homeobox 3, [RH, Score=267, Expect=2e-86]} {Mouse: ENSMUSG00000048349, Pou4f1, POU domain, class 4, transcription factor 1, [RH, Score=271, Expect=6e-87]; ENSMUSG00000031688, Pou4f2, POU domain, class 4, transcription factor 2, [RH, Score=268, Expect=3e-86]; ENSMUSG00000024497, Pou4f3, POU domain, class 4, transcription factor 3, [RH, Score=267, Expect=2e-86]} {Dmel: FBgn0000028, acj6, abnormal chemosensory jump 6, [RH, Score=264, Expect=4e-85]} {Celegans: WBGene00006818, unc-86, Transcription factor unc-86, [RH, Score=236, Expect=2e-74]} {Smed: dd_Smed_v6_15555_0_1, dd_Smed_v6_15555_0_1, [RH, Score=305, Expect=7e-101]} {RNA1509_57422} {RNA1310_8139.2} {RNA815_32659}

Mlig455_014179 {REF} {Length: 532} {NoTransDecoderORF} {RNA1310_72815} {RNA815_37705}
32. MligTC455_29050 162 3.38 Mlig455_004578

Neo: -

Age: -

 TMEM30A 0.97 - - - - - 0.970 Mlig455_004578 {REF} {Length: 3215} {TRANSSPLICED} {Pfam: LEM3 (ligand-effect modulator 3) family / CDC50 family [PF03381.17, score=266.2]} {Human: ENSG00000112697, TMEM30A, transmembrane protein 30A, [Score=210, Expect=3e-64]} {Mouse: ENSMUSG00000032328, Tmem30a, transmembrane protein 30A, [Score=214, Expect=4e-66]} {Dmel: FBgn0030752, CG9947, [Score=253, Expect=1e-81]} {Celegans: WBGene00019946, chat-1, CDC50 family protein chat-1, [Score=218, Expect=8e-68]} {Smed: dd_Smed_v6_6430_0_1, dd_Smed_v6_6430_0_1, [Score=258, Expect=9e-84]} {RNA1509_38539} {RNA1310_9371} {RNA815_12157}
33. MligTC455_46394 8810 183.54 Mlig455_054818, Mlig455_054826

Neo: -

Age: -

Region-specific R2: 1.771

Region-enriched R2: 1.255/0.00038

 PKD2 0.97 - - - - - 0.970

Mlig455_054818 {REF} {Length: 2992} {TRANSSPLICED} {Pfam: Polycystin cation channel [PF08016.14, score=487.7]; Ion transport protein [PF00520.33, score=93.3]; EF hand [PF00036.34, score=32.7]; Ferredoxin I 4Fe-4S cluster domain [PF18109.3, score=21.3]} {Human: ENSG00000118762, PKD2, polycystin 2, transient receptor potential cation channel, [RH, Score=750, Expect=0.0]} {Mouse: ENSMUSG00000034462, Pkd2, polycystic kidney disease 2, [RH, Score=747, Expect=0.0]} {Dmel: FBgn0041195, Pkd2, Polycystic kidney disease 2, [Score=323, Expect=1e-96]} {Celegans: WBGene00004035, pkd-2, Polycystin-2, [Score=380, Expect=6e-120]} {Smed: dd_Smed_v6_17348_0_3, dd_Smed_v6_17348_0_3, [Score=733, Expect=0.0]} {RNA1509_1615} {RNA1310_21296.2, RNA1509_1615} {RNA1509_1615, RNA815_3158.1}

Mlig455_054826 {REF} {Length: 3118} {TRANSSPLICED} {Pfam: Polycystin cation channel [PF08016.14, score=487.7]; Ion transport protein [PF00520.33, score=93.4]; EF hand [PF00036.34, score=32.6]; Ferredoxin I 4Fe-4S cluster domain [PF18109.3, score=21.2]} {Human: ENSG00000118762, PKD2, polycystin 2, transient receptor potential cation channel, [RH, Score=754, Expect=0.0]} {Mouse: ENSMUSG00000034462, Pkd2, polycystic kidney disease 2, [RH, Score=751, Expect=0.0]} {Dmel: FBgn0041195, Pkd2, Polycystic kidney disease 2, [Score=323, Expect=2e-96]} {Celegans: WBGene00004035, pkd-2, Polycystin-2, [Score=387, Expect=1e-122]} {Smed: dd_Smed_v6_13327_0_1, dd_Smed_v6_13327_0_1, [RH, Score=769, Expect=0.0]} {RNA1509_13522} {RNA1310_21296.2} {RNA815_3158.1}
34. MligTC455_39821 45 0.94 Mlig455_020248

Neo: -

Age: -

 DRGX 0.969 - - - - - 0.969 Mlig455_020248 {REF} {Length: 1773} {Pfam: Homeodomain [PF00046.31, score=83.1]} {Human: ENSG00000165606, DRGX, dorsal root ganglia homeobox, [RH, Score=132, Expect=4e-35]} {Mouse: ENSMUSG00000041730, Prrxl1, paired related homeobox protein-like 1, [RH, Score=133, Expect=1e-35]} {Dmel: FBgn0085369, Drgx, Dorsal root ganglia homeobox, [RH, Score=152, Expect=3e-40]} {Celegans: WBGene00000440, ceh-17, C. Elegans Homeobox; CEH-17, [Score=112, Expect=3e-28]} {Smed: dd_Smed_v6_63359_0_1, dd_Smed_v6_63359_0_1, [RH, Score=159, Expect=2e-47]} {RNA1310_82891}
35. MligTC455_04832 51 1.06 Mlig455_062392

Neo: -

Age: -

Regeneration-upregulated R2: 6.311

Regeneration-enriched R2: 6.311

 0.968 - - - - - 0.968 Mlig455_062392 {REF} {Length: 699}
36. MligTC455_50288 118 2.47 Mlig455_059182

Neo: -

Age: Up-Down-Down

 0.968 - - - - - 0.968 Mlig455_059182 {REF} {Length: 3438} {Pfam: Sushi repeat (SCR repeat) [PF00084.22, score=42.6]; Lectin C-type domain [PF00059.23, score=23.6]} {Smed: dd_Smed_v6_41498_0_1, dd_Smed_v6_41498_0_1, [RH, Score=189, Expect=3e-53]} {RNA1509_45950, RNA1509_54781} {RNA1310_10757.1, RNA1509_45950, RNA1509_54781} {RNA1509_45950, RNA1509_54781, RNA815_5369}
37. MligTC455_23183 50 1.04 Mlig455_030451

Neo: -

Age: -

 0.967 - - - - - 0.967 Mlig455_030451 {REF} {Length: 339} {NoTransDecoderORF} {RNA1509_44792} {RNA1310_92164} {RNA815_45158}
38. MligTC455_06333 34 0.7 Mlig455_017581

Neo: -

Age: -

 0.966 - - - - - 0.966 Mlig455_017581 {REF} {Length: 423} {NoTransDecoderORF}
39. MligTC455_28774 97 2.01 Mlig455_013476, Mlig455_033890, Mlig455_068702

Neo: -

Age: -

 0.966 - - - - 0.966 -

Mlig455_013476 {REF} {Length: 260} {NoTransDecoderORF} {RNA1509_31462} {RNA1310_2574} {RNA815_18445}

Mlig455_033890 {REF} {Length: 223} {NoTransDecoderORF} {RNA1509_31462} {RNA1310_23820} {RNA815_18445}

Mlig455_068702 {REF} {Length: 77} {NoTransDecoderORF} {RNA1509_31462} {RNA1310_23820} {RNA815_37446}
40. MligTC455_32301 186 3.87 Mlig455_069117

Neo: -

Age: Up-Down-Down

 0.966 - - - - - 0.966 Mlig455_069117 {REF} {Length: 3748} {TRANSSPLICED} {Smed: dd_Smed_v6_5953_0_1, dd_Smed_v6_5953_0_1, [Score=90.5, Expect=6e-21]} {RNA1509_27954} {RNA1310_25241.1} {RNA815_10356}
41. MligTC455_45712 91 1.89 Mlig455_050761, Mlig455_050791

Neo: -

Age: -

 0.966 - - - - - 0.966

Mlig455_050761 {REF} {Length: 2816} {RNA1509_10628} {RNA1310_39724.1} {RNA815_34935}

Mlig455_050791 {REF} {Length: 2817} {RNA1509_10628} {RNA1310_39724.1} {RNA815_34935}
42. MligTC455_10155 25 0.53 Mlig455_036600

Neo: -

Age: -

 0.965 - - - - - 0.965 Mlig455_036600 {REF} {Length: 1976} {NoTransDecoderORF} {RNA1509_13138} {RNA1310_14959.1} {RNA815_9852.1}
43. MligTC455_12298 30 0.63 Mlig455_030745

Neo: -

Age: -

 0.965 - - - - - 0.965 Mlig455_030745 {REF} {Length: 3205} {RNA1310_50186} {RNA815_38061}
44. MligTC455_31658 13 0.28 Mlig455_008283, Mlig455_009320, Mlig455_024153, Mlig455_034528, Mlig455_042959, Mlig455_062047, Mlig455_067602

Neo: Irradiation

Age: Up-Down-Up, logFC(26M/2M)=1.307

 PIF1 0.965 - - - - - 0.965

Mlig455_008283 {REF} {Length: 3909} {Pfam: PIF1-like helicase [PF05970.16, score=202.1]; Helitron helicase-like domain at N-terminus [PF14214.8, score=174.2]; AAA domain [PF13604.8, score=46.1]; AAA domain [PF13245.8, score=18.8]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=69.7, Expect=3e-11]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=66.2, Expect=1e-10]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=76.6, Expect=8e-14]} {Celegans: WBGene00019136, F59H6.5, [Score=645, Expect=0.0]} {Smed: dd_Smed_v6_91935_0_1, dd_Smed_v6_91935_0_1, [Score=68.6, Expect=2e-13]} {RNA1509_5036} {RNA1310_728.1} {RNA815_356.1}

Mlig455_009320 {REF} {Length: 4963} {Pfam: Helitron helicase-like domain at N-terminus [PF14214.8, score=175.8]} {Celegans: WBGene00019136, F59H6.5, [Score=428, Expect=2e-130]} {Smed: dd_Smed_v6_5211_0_1, dd_Smed_v6_5211_0_1, [Score=73.9, Expect=1e-14]} {RNA1509_5036} {RNA1310_4048.1} {RNA815_356.1}

Mlig455_024153 {REF} {Length: 3481} {Pfam: Helitron helicase-like domain at N-terminus [PF14214.8, score=176.3]} {Celegans: WBGene00019136, F59H6.5, [Score=490, Expect=2e-153]} {Smed: dd_Smed_v6_22430_0_1, dd_Smed_v6_22430_0_1, [Score=57.8, Expect=4e-10]} {RNA1509_5036} {RNA1310_11485} {RNA815_356.1}

Mlig455_034528 {REF} {Length: 4017} {Pfam: PIF1-like helicase [PF05970.16, score=335.4]; Helitron helicase-like domain at N-terminus [PF14214.8, score=172.8]; AAA domain [PF13604.8, score=48.2]; UvrD-like helicase C-terminal domain [PF13538.8, score=26.9]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=127, Expect=3e-29]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=121, Expect=1e-27]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=124, Expect=2e-28]} {Celegans: WBGene00022692, ZK250.9, [Score=723, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=115, Expect=3e-26]} {RNA1509_5036} {RNA1310_728.1} {RNA815_356.1}

Mlig455_042959 {REF} {Length: 3203} {Pfam: PIF1-like helicase [PF05970.16, score=188.5]; Helitron helicase-like domain at N-terminus [PF14214.8, score=153.1]; AAA domain [PF13604.8, score=44.1]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=68.6, Expect=5e-11]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=63.9, Expect=5e-10]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=72.4, Expect=2e-12]} {Celegans: WBGene00019136, F59H6.5, [Score=581, Expect=0.0]} {Smed: dd_Smed_v6_91935_0_1, dd_Smed_v6_91935_0_1, [Score=70.9, Expect=2e-14]} {RNA1509_5036} {RNA1310_11485} {RNA815_356.1}

Mlig455_062047 {REF} {Length: 4880} {Pfam: PIF1-like helicase [PF05970.16, score=197.7]; Helitron helicase-like domain at N-terminus [PF14214.8, score=104.7]; AAA domain [PF13604.8, score=45.9]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=67.4, Expect=1e-10]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=63.9, Expect=7e-10]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=73.2, Expect=1e-12]} {Celegans: WBGene00019136, F59H6.5, [Score=544, Expect=2e-169]} {Smed: dd_Smed_v6_91935_0_1, dd_Smed_v6_91935_0_1, [Score=70.5, Expect=5e-14]} {RNA1509_5036} {RNA1310_11485} {RNA815_356.1}

Mlig455_067602 {REF} {Length: 6331} {Pfam: PIF1-like helicase [PF05970.16, score=333.7]; Helitron helicase-like domain at N-terminus [PF14214.8, score=174.7]; AAA domain [PF13604.8, score=45.8]; UvrD-like helicase C-terminal domain [PF13538.8, score=25.5]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=125, Expect=2e-28]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=120, Expect=2e-27]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=122, Expect=5e-28]} {Celegans: WBGene00019136, F59H6.5, [RH, Score=771, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=116, Expect=4e-26]} {RNA1509_5036} {RNA1310_728.1} {RNA815_356.1}
45. MligTC455_41669 480 10.01 Mlig455_040778, Mlig455_064613

Neo: -

Age: Down-Down-Up

 0.965 - - - - - 0.965

Mlig455_040778 {REF} {Length: 2233} {RNA1310_31511} {RNA815_21534}

Mlig455_064613 {REF} {Length: 1332} {RNA1310_32935} {RNA815_21534}
46. MligTC455_16907 87 1.82 Mlig455_008705

Neo: -

Age: Down-Up-Down

 SLC17A8 0.964 - - - - - 0.964 Mlig455_008705 {REF} {Length: 1949} {Pfam: Major Facilitator Superfamily [PF07690.18, score=37.9]; SOCE-associated regulatory factor of calcium homoeostasis [PF06682.14, score=19.6]} {Human: ENSG00000179520, SLC17A8, solute carrier family 17 member 8, [Score=213, Expect=1e-65]; ENSG00000091664, SLC17A6, solute carrier family 17 member 6, [Score=212, Expect=1e-64]; ENSG00000104888, SLC17A7, solute carrier family 17 member 7, [Score=208, Expect=6e-64]} {Mouse: ENSMUSG00000019935, Slc17a8, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8, [Score=215, Expect=1e-67]; ENSMUSG00000030500, Slc17a6, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6, [Score=211, Expect=1e-64]; ENSMUSG00000070570, Slc17a7, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7, [Score=207, Expect=4e-63]} {Dmel: FBgn0031424, VGlut, Vesicular glutamate transporter, [Score=196, Expect=1e-58]} {Celegans: WBGene00001135, eat-4, Probable vesicular glutamate transporter eat-4, [Score=189, Expect=1e-56]} {Smed: dd_Smed_v6_10192_0_1, dd_Smed_v6_10192_0_1, [Score=234, Expect=3e-73]} {RNA1509_38152} {RNA1310_19607.1} {RNA815_14894}
47. MligTC455_21353 452 9.41 Mlig455_004209, Mlig455_004221

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.406

 0.964 - - - - - 0.964

Mlig455_004209 {REF} {Length: 1786} {Smed: dd_Smed_v6_11196_0_1, dd_Smed_v6_11196_0_1, [RH, Score=100, Expect=1e-24]} {RNA1509_45598} {RNA1310_22701, RNA1509_45598} {RNA1509_45598, RNA815_19949}

Mlig455_004221 {REF} {Length: 1440} {Smed: dd_Smed_v6_11196_0_1, dd_Smed_v6_11196_0_1, [Score=84.0, Expect=9e-19]} {RNA1509_45598} {RNA1310_32084} {RNA815_19949}
48. MligTC455_34279 55 1.15 Mlig455_056988

Neo: -

Age: -

 ZBTB16 0.964 - - - - - 0.964 Mlig455_056988 {REF} {Length: 3794} {Pfam: C2H2-type zinc-finger domain [PF13909.8, score=57.5]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=23.3]} {Human: ENSG00000109906, ZBTB16, zinc finger and BTB domain containing 16, [Score=52.8, Expect=2e-06]; ENSG00000084093, REST, RE1 silencing transcription factor, [Score=52.0, Expect=5e-06]} {Mouse: ENSMUSG00000026135, Zfp142, zinc finger protein 142, [Score=62.4, Expect=3e-09]} {Dmel: FBgn0262160, CG9932, [RH, Score=66.6, Expect=9e-11]} {Celegans: WBGene00001824, hbl-1, Hunchback-like protein, [Score=50.4, Expect=6e-06]} {Smed: dd_Smed_v6_36433_0_1, dd_Smed_v6_36433_0_1, [Score=176, Expect=9e-48]} {RNA1509_19024} {RNA1310_45424} {RNA815_39699}
49. MligTC455_05737 9 0.19 Mlig455_048810

Neo: -

Age: -

 0.963 - - - - - 0.963 Mlig455_048810 {REF} {Length: 1184} {NoTransDecoderORF} {RNA1310_118235}
50. MligTC455_14152 22 0.46 Mlig455_053688, Mlig455_064881

Neo: -

Age: logFC(26M/2M)=-0.324

Regeneration-upregulated R2: 8.032

Regeneration-enriched R2: 8.032

 0.963 - - - - - 0.963

Mlig455_053688 {REF} {Length: 6071} {Dmel: FBgn0023172, RhoGEF2, Rho guanine nucleotide exchange factor 2, [Score=53.5, Expect=1e-06]} {Celegans: WBGene00019871, R04E5.8, [Score=49.7, Expect=1e-05]} {RNA1509_14246} {RNA1310_1637.2} {RNA815_1254}

Mlig455_064881 {REF} {Length: 8032} {Pfam: Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=20.8]} {Dmel: FBgn0023172, RhoGEF2, Rho guanine nucleotide exchange factor 2, [Score=61.2, Expect=9e-09]} {RNA1509_14246} {RNA1310_1655.2} {RNA815_1254}
51. MligTC455_15087 28 0.59 Mlig455_036738

Neo: -

Age: -

 0.963 - - - - - 0.963 Mlig455_036738 {REF} {Length: 821} {RNA1509_18025} {RNA1310_92583} {RNA815_44681}
52. MligTC455_18215 8 0.17 Mlig455_022771

Neo: -

Age: -

 ZAN 0.963 - - - - - 0.963 Mlig455_022771 {REF} {Length: 2198} {Pfam: Herpes virus major outer envelope glycoprotein (BLLF1) [PF05109.15, score=23.9]} {Human: ENSG00000146839, ZAN, zonadhesin (gene/pseudogene), [Score=105, Expect=3e-24]} {RNA1509_42251, RNA1509_55150} {RNA1310_26349, RNA1509_42251, RNA1509_55150} {RNA1509_42251, RNA1509_55150, RNA815_5817}
53. MligTC455_22733 41 0.85 Mlig455_034409

Neo: -

Age: Down-Up-Down

 0.963 - - - - 0.963 - Mlig455_034409 {REF} {Length: 3449} {RNA1509_47691} {RNA1310_5733} {RNA815_5692.2}
54. MligTC455_41870 67 1.39 Mlig455_042417

Neo: -

Age: Up-Down-Up

 ANGPTL1 0.963 - - - - - 0.963 Mlig455_042417 {REF} {Length: 1469} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=110.4]} {Human: ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=102, Expect=6e-24]; ENSG00000136859, ANGPTL2, angiopoietin like 2, [Score=99.8, Expect=3e-23]} {Mouse: ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=104, Expect=6e-25]; ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=99.4, Expect=4e-23]} {Dmel: FBgn0003326, sca, scabrous, [Score=89.4, Expect=1e-19]} {Celegans: WBGene00017013, ensh-1, [Score=55.1, Expect=2e-08]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=73.6, Expect=1e-14]} {RNA1509_28467} {RNA1310_67810} {RNA815_18070.1}
55. MligTC455_52128 26 0.54 Mlig455_056382

Neo: -

Age: -

 0.963 - - - - - 0.963 Mlig455_056382 {REF} {Length: 892} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=20.5]; Ankyrin repeat [PF00023.32, score=19.7]} {RNA1310_149618}
56. MligTC455_21424 38 0.79 Mlig455_006171

Neo: -

Age: -

Regeneration-enriched BL: 6.602
Regeneration-enriched R2: 6.077

 ALKBH3 0.962 - - - - - 0.962 Mlig455_006171 {REF} {Length: 1406} {Pfam: 2OG-Fe(II) oxygenase superfamily [PF13532.8, score=97.0]} {Human: ENSG00000166199, ALKBH3, alkB homolog 3, alpha-ketoglutaratedependent dioxygenase, [Score=108, Expect=3e-26]} {Mouse: ENSMUSG00000040174, Alkbh3, alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase, [Score=110, Expect=6e-27]} {Smed: dd_Smed_v6_7441_0_1, dd_Smed_v6_7441_0_1, [Score=107, Expect=7e-26]}
57. MligTC455_30073 56 1.16 Mlig455_006104

Neo: -

Age: -

 GALR3 0.962 - - - - - 0.962 Mlig455_006104 {REF} {Length: 3099} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=106.7]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=22.5]; Serpentine type 7TM GPCR chemoreceptor Srv [PF10323.11, score=21.9]} {Human: ENSG00000128310, GALR3, galanin receptor 3, [Score=90.1, Expect=1e-20]; ENSG00000182687, GALR2, galanin receptor 2, [Score=86.3, Expect=3e-19]} {Mouse: ENSMUSG00000114755, Galr3, galanin receptor 3, [Score=92.8, Expect=8e-22]} {Dmel: FBgn0033058, CCHa2-R, CCHamide-2 receptor, [Score=76.6, Expect=4e-16]} {Celegans: WBGene00008808, ntr-2, Nematocin receptor 2, [Score=63.9, Expect=6e-12]} {Smed: dd_Smed_v6_10325_0_1, dd_Smed_v6_10325_0_1, [Score=69.7, Expect=6e-14]} {RNA1310_26096}
58. MligTC455_42130 49 1.02 Mlig455_031418

Neo: -

Age: -

 0.962 - - - - - 0.962 Mlig455_031418 {REF} {Length: 1285} {RNA1310_89057}
59. MligTC455_12794 32 0.67 Mlig455_052083

Neo: -

Age: logFC(26M/2M)=-0.315

 CSNK1D 0.961 - - - - 0.961 - Mlig455_052083 {REF} {Length: 2825} {Pfam: Protein kinase domain [PF00069.27, score=97.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=58.1]; Fungal protein kinase [PF17667.3, score=29.9]; Phosphotransferase enzyme family [PF01636.25, score=21.1]} {Human: ENSG00000141551, CSNK1D, casein kinase 1 delta, [RH, Score=578, Expect=0.0]; ENSG00000283900, TPTEP2-CSNK1E, TPTEP2-CSNK1E readthrough, [RH, Score=573, Expect=0.0]; ENSG00000213923, CSNK1E, casein kinase 1 epsilon, [RH, Score=573, Expect=0.0]} {Mouse: ENSMUSG00000025162, Csnk1d, casein kinase 1, delta, [RH, Score=578, Expect=0.0]; ENSMUSG00000022433, Csnk1e, casein kinase 1, epsilon, [RH, Score=574, Expect=0.0]} {Dmel: FBgn0002413, dco, discs overgrown, [RH, Score=529, Expect=0.0]} {Celegans: WBGene00002203, kin-20, Casein kinase I isoform delta, [RH, Score=499, Expect=1e-176]} {Smed: dd_Smed_v6_4561_0_1, dd_Smed_v6_4561_0_1, [RH, Score=577, Expect=0.0]} {RNA1509_19984, RNA1509_33497} {RNA1310_23975, RNA1509_19984, RNA1509_33497} {RNA1509_19984, RNA1509_33497, RNA815_12595}
60. MligTC455_34524 155 3.22 Mlig455_021291

Neo: -

Age: Down-Up-Down

Region-specific R2: 4.905

Region-enriched R2: 4.200/0.01842

 0.961 - - - - - 0.961 Mlig455_021291 {REF} {Length: 1478} {NoTransDecoderORF} {RNA1509_56543} {RNA1310_26920, RNA1509_56543} {RNA1509_56543, RNA815_11718}
61. MligTC455_42994 1521 31.7 Mlig455_035840

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.356

Region-enriched R2: 1.854/0.00052

 0.961 - - - - - 0.961 Mlig455_035840 {REF} {Length: 1436} {RNA1509_29485, RNA1509_42231} {RNA1310_26640, RNA1509_29485, RNA1509_42231} {RNA1509_29485, RNA1509_42231, RNA815_37260}
62. MligTC455_46170 9 0.19 Mlig455_022412, Mlig455_047655, Mlig455_055613

Neo: -

Age: Up-Down-Down

 GTF2IRD2, GTF2IRD2B 0.961 - - - - - 0.961

Mlig455_022412 {REF} {Length: 3025} {Pfam: Domain of unknown function (DUF4371) [PF14291.8, score=38.5]; Spin-doc zinc-finger [PF18658.3, score=24.1]} {Human: ENSG00000174428, GTF2IRD2B, GTF2I repeat domain containing 2B, [RH, Score=393, Expect=3e-125]; ENSG00000196275, GTF2IRD2, GTF2I repeat domain containing 2, [RH, Score=390, Expect=2e-124]} {Mouse: ENSMUSG00000015942, Gtf2ird2, GTF2I repeat domain containing 2, [RH, Score=365, Expect=4e-115]} {Smed: dd_Smed_v6_25074_0_1, dd_Smed_v6_25074_0_1, [RH, Score=254, Expect=2e-76]} {RNA1509_50311} {RNA1310_1521.1, RNA1509_50311} {RNA1509_50311, RNA815_920.1}

Mlig455_047655 {REF} {Length: 2123} {Pfam: Domain of unknown function (DUF4371) [PF14291.8, score=37.2]; Spin-doc zinc-finger [PF18658.3, score=24.1]} {Human: ENSG00000196275, GTF2IRD2, GTF2I repeat domain containing 2, [RH, Score=387, Expect=6e-123]; ENSG00000174428, GTF2IRD2B, GTF2I repeat domain containing 2B, [RH, Score=387, Expect=3e-123]} {Mouse: ENSMUSG00000015942, Gtf2ird2, GTF2I repeat domain containing 2, [RH, Score=360, Expect=4e-113]} {Smed: dd_Smed_v6_25074_0_1, dd_Smed_v6_25074_0_1, [RH, Score=256, Expect=3e-77]} {RNA1509_50311} {RNA1310_584.1} {RNA815_920.1}

Mlig455_055613 {REF} {Length: 2267} {Pfam: Domain of unknown function (DUF4371) [PF14291.8, score=37.2]; Spin-doc zinc-finger [PF18658.3, score=24.1]} {Human: ENSG00000174428, GTF2IRD2B, GTF2I repeat domain containing 2B, [RH, Score=391, Expect=1e-124]; ENSG00000196275, GTF2IRD2, GTF2I repeat domain containing 2, [RH, Score=390, Expect=3e-124]} {Mouse: ENSMUSG00000015942, Gtf2ird2, GTF2I repeat domain containing 2, [RH, Score=364, Expect=2e-114]} {Smed: dd_Smed_v6_25074_0_1, dd_Smed_v6_25074_0_1, [RH, Score=255, Expect=6e-77]} {RNA1509_50311} {RNA1310_584.1} {RNA815_920.1}
63. MligTC455_54338 49 1.02 Mlig455_056485

Neo: -

Age: Up-Down-Down

 PKDREJ 0.961 - - - - - 0.961 Mlig455_056485 {REF} {Length: 11174} {Pfam: Polycystin cation channel [PF08016.14, score=290.0]; REJ domain [PF02010.17, score=90.7]; PLAT/LH2 domain [PF01477.25, score=67.3]; PKD domain [PF00801.22, score=47.7]; Ion transport protein [PF00520.33, score=40.1]; PKD domain [PF18911.2, score=29.8]; GPCR proteolysis site, GPS, motif [PF01825.23, score=27.4]; WSC domain [PF01822.21, score=27.0]} {Human: ENSG00000130943, PKDREJ, polycystin family receptor for egg jelly, [Score=280, Expect=1e-74]} {Mouse: ENSMUSG00000034416, Pkd1l2, polycystic kidney disease 1 like 2, [Score=307, Expect=8e-83]} {Dmel: FBgn0041195, Pkd2, Polycystic kidney disease 2, [Score=151, Expect=3e-36]} {Celegans: WBGene00003058, lov-1, Location of vulva defective 1, [RH, Score=302, Expect=1e-81]} {Smed: dd_Smed_v6_15525_0_2, dd_Smed_v6_15525_0_2, [RH, Score=1844, Expect=0.0]} {RNA1509_16432} {RNA1310_1236} {RNA815_2411}
64. MligTC455_00393 33 0.69 Mlig455_021268

Neo: -

Age: -

 0.96 - - - - - 0.960 Mlig455_021268 {REF} {Length: 662} {NoTransDecoderORF}
65. MligTC455_20390 87 1.82 Mlig455_051716

Neo: -

Age: -

 SLC1A2 0.96 - - - - - 0.960 Mlig455_051716 {REF} {Length: 4683} {Pfam: Sodium:dicarboxylate symporter family [PF00375.20, score=432.6]} {Human: ENSG00000110436, SLC1A2, solute carrier family 1 member 2, [RH, Score=530, Expect=0.0]} {Mouse: ENSMUSG00000005089, Slc1a2, solute carrier family 1 (glial high affinity glutamate transporter), member 2, [RH, Score=545, Expect=0.0]} {Dmel: FBgn0026439, Eaat1, Excitatory amino acid transporter 1, [RH, Score=375, Expect=4e-124]} {Celegans: WBGene00001620, glt-1, Excitatory amino acid transporter, [RH, Score=517, Expect=1e-179]} {Smed: dd_Smed_v6_7570_0_1, dd_Smed_v6_7570_0_1, [RH, Score=611, Expect=0.0]} {RNA1509_31315} {RNA1310_5180} {RNA815_8754}
66. MligTC455_10923 10 0.21 Mlig455_017869

Neo: -

Age: -

 0.959 - - - - - 0.959 Mlig455_017869 {REF} {Length: 3767} {Pfam: Domain of unknown function (DUF4573) [PF15140.8, score=25.9]; Plasmodium histidine-rich protein (HRPII/III) [PF05403.13, score=18.7]}
67. MligTC455_12770 38 0.79 Mlig455_029135

Neo: -

Age: -

 0.959 - - - - - 0.959 Mlig455_029135 {REF} {Length: 641} {RNA1509_20946} {RNA1310_48952} {RNA815_4785.1}
68. MligTC455_13846 32 0.67 Mlig455_013761

Neo: -

Age: -

 CALM2 0.959 - - - - - 0.959 Mlig455_013761 {REF} {Length: 941} {Pfam: EF hand [PF00036.34, score=94.2]; EF-hand domain [PF13405.8, score=86.1]; EF-hand domain pair [PF13499.8, score=83.6]; EF hand [PF13202.8, score=77.1]; EF-hand domain pair [PF13833.8, score=42.5]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=31.3]; EF-hand domain [PF14658.8, score=23.8]; Ca2+ insensitive EF hand [PF08726.12, score=21.5]; Caleosin related protein [PF05042.15, score=21.3]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=60.1, Expect=1e-11]; ENSG00000160014, CALM3, calmodulin 3, [Score=60.1, Expect=1e-11]; ENSG00000198668, CALM1, calmodulin 1, [Score=60.1, Expect=1e-11]; ENSG00000178363, CALML3, calmodulin like 3, [Score=59.3, Expect=2e-11]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=60.5, Expect=1e-11]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=60.1, Expect=8e-12]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=60.1, Expect=8e-12]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=59.7, Expect=1e-11]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=60.8, Expect=3e-12]} {Celegans: WBGene00019352, K03A1.4, [Score=70.9, Expect=8e-16]} {Smed: dd_Smed_v6_15455_0_1, dd_Smed_v6_15455_0_1, [RH, Score=97.4, Expect=1e-26]} {RNA1310_47452} {RNA815_31258}
69. MligTC455_16015 85 1.78 Mlig455_057827

Neo: -

Age: -

 SLC6A3 0.959 - - - - - 0.959 Mlig455_057827 {REF} {Length: 3250} {tRNA: Undet(NNN),pseudo, score=20.8} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=587.0]} {Human: ENSG00000276996, SLC6A3, solute carrier family 6 member 3, [Score=520, Expect=2e-177]; ENSG00000142319, SLC6A3, solute carrier family 6 member 3, [Score=520, Expect=2e-177]; ENSG00000103546, SLC6A2, solute carrier family 6 member 2, [Score=506, Expect=5e-172]} {Mouse: ENSMUSG00000021609, Slc6a3, solute carrier family 6 (neurotransmitter transporter, dopamine), member 3, [Score=523, Expect=1e-178]; ENSMUSG00000055368, Slc6a2, solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2, [Score=513, Expect=6e-175]} {Dmel: FBgn0034136, DAT, Dopamine transporter, [Score=471, Expect=2e-158]} {Celegans: WBGene00000934, dat-1, Sodium-dependent dopamine transporter, [Score=432, Expect=2e-143]} {Smed: dd_Smed_v6_22486_0_1, dd_Smed_v6_22486_0_1, [Score=573, Expect=0.0]} {RNA1509_41282} {RNA1310_11169} {RNA815_3966}
70. MligTC455_22935 37 0.76 Mlig455_047812

Neo: -

Age: Up-Down-Up

 TRAK1 0.959 - - - - - 0.959 Mlig455_047812 {REF} {Length: 6243} {TRANSSPLICED} {Pfam: HAP1 N-terminal conserved region [PF04849.15, score=149.7]} {Human: ENSG00000182606, TRAK1, trafficking kinesin protein 1, [Score=138, Expect=9e-33]} {Mouse: ENSMUSG00000032536, Trak1, trafficking protein, kinesin binding 1, [Score=137, Expect=1e-32]} {Dmel: FBgn0262872, milt, milton, [Score=90.9, Expect=3e-18]} {Celegans: WBGene00020838, trak-1, TRAK1 and TRAK2 related, [Score=62.4, Expect=1e-09]} {Smed: dd_Smed_v6_4847_0_1, dd_Smed_v6_4847_0_1, [Score=129, Expect=1e-30]} {RNA1509_17102} {RNA1310_4244, RNA1509_17102} {RNA1509_17102, RNA815_8925}
71. MligTC455_29012 227 4.74 Mlig455_004572

Neo: -

Age: Down-Down-Up

 TMEM30A 0.959 - - - - - 0.959 Mlig455_004572 {REF} {Length: 3160} {TRANSSPLICED} {Pfam: LEM3 (ligand-effect modulator 3) family / CDC50 family [PF03381.17, score=265.5]} {Human: ENSG00000112697, TMEM30A, transmembrane protein 30A, [RH, Score=234, Expect=7e-73]} {Mouse: ENSMUSG00000032328, Tmem30a, transmembrane protein 30A, [RH, Score=241, Expect=7e-76]} {Dmel: FBgn0030752, CG9947, [RH, Score=294, Expect=9e-97]} {Celegans: WBGene00019946, chat-1, CDC50 family protein chat-1, [Score=246, Expect=3e-78]} {Smed: dd_Smed_v6_6430_0_1, dd_Smed_v6_6430_0_1, [Score=275, Expect=2e-89]} {RNA1509_38539} {RNA1310_9371} {RNA815_12157}
72. MligTC455_29153 62 1.28 Mlig455_018743, Mlig455_018911

Neo: -

Age: -

 0.959 - - - - - 0.959

Mlig455_018743 {REF} {Length: 1064} {RNA1509_38365} {RNA1310_117516} {RNA815_19813}

Mlig455_018911 {REF} {Length: 2829} {RNA1509_38365} {RNA1310_117516} {RNA815_28950}
73. MligTC455_30839 19 0.39 Mlig455_027444

Neo: -

Age: -

 0.959 - - - - - 0.959 Mlig455_027444 {REF} {Length: 516} {NoTransDecoderORF} {RNA1310_123335}
74. MligTC455_35019 168 3.49 Mlig455_046994

Neo: -

Age: -

 ASIC4 0.959 - - - - - 0.959 Mlig455_046994 {REF} {Length: 4001} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=101.4]} {Human: ENSG00000072182, ASIC4, acid sensing ion channel subunit family member 4, [Score=76.3, Expect=1e-13]} {Mouse: ENSMUSG00000033007, Asic4, acid-sensing (proton-gated) ion channel family member 4, [Score=76.3, Expect=8e-14]; ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=72.8, Expect=8e-13]} {Smed: dd_Smed_v6_15233_0_1, dd_Smed_v6_15233_0_1, [RH, Score=103, Expect=1e-22]} {RNA1509_33816} {RNA1310_3176, RNA1509_33816} {RNA1509_33816, RNA815_12439}
75. MligTC455_47776 17 0.35 Mlig455_034068

Neo: -

Age: -

 CHRNA9 0.959 - - - - - 0.959 Mlig455_034068 {REF} {Length: 1878} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=139.6]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=90.5]} {Human: ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=206, Expect=3e-60]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=204, Expect=3e-59]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=204, Expect=3e-59]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=203, Expect=4e-59]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=201, Expect=2e-58]; ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=200, Expect=2e-58]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=196, Expect=2e-56]} {Mouse: ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=208, Expect=3e-61]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=207, Expect=6e-61]; ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=204, Expect=2e-59]; ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=201, Expect=4e-59]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=216, Expect=1e-63]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=211, Expect=2e-62]} {Smed: dd_Smed_v6_31300_0_1, dd_Smed_v6_31300_0_1, [Score=211, Expect=2e-62]} {RNA1310_14388.1} {RNA815_21155}
76. MligTC455_20149 191 3.98 Mlig455_000246, Mlig455_058518

Neo: -

Age: -

Region-enriched R2: 4.445/0.03524

 HPCAL4, NCALD 0.958 - - - - - 0.958

Mlig455_000246 {REF} {Length: 978} {Human: ENSG00000116983, HPCAL4, hippocalcin like 4, [Score=79.0, Expect=2e-17]; ENSG00000104490, NCALD, neurocalcin delta, [Score=79.0, Expect=2e-17]; ENSG00000115756, HPCAL1, hippocalcin like 1, [Score=77.8, Expect=5e-17]; ENSG00000185774, KCNIP4, potassium voltage-gated channel interacting protein 4, [Score=75.5, Expect=1e-15]} {Mouse: ENSMUSG00000051359, Ncald, neurocalcin delta, [Score=79.0, Expect=1e-17]; ENSMUSG00000046093, Hpcal4, hippocalcin-like 4, [Score=79.0, Expect=1e-17]; ENSMUSG00000071379, Hpcal1, hippocalcin-like 1, [Score=77.0, Expect=7e-17]; ENSMUSG00000029088, Kcnip4, Kv channel interacting protein 4, [Score=75.5, Expect=8e-16]} {Dmel: FBgn0013303, Nca, Neurocalcin, [Score=83.2, Expect=3e-19]} {Celegans: WBGene00003563, ncs-1, Neuronal calcium sensor 1, [Score=67.8, Expect=1e-13]} {Smed: dd_Smed_v6_2568_0_1, dd_Smed_v6_2568_0_1, [Score=72.0, Expect=2e-15]} {RNA1310_101382}

Mlig455_058518 {REF} {Length: 1176} {Human: ENSG00000104490, NCALD, neurocalcin delta, [Score=82.0, Expect=2e-18]; ENSG00000115756, HPCAL1, hippocalcin like 1, [Score=81.3, Expect=3e-18]; ENSG00000116983, HPCAL4, hippocalcin like 4, [Score=80.1, Expect=7e-18]} {Mouse: ENSMUSG00000051359, Ncald, neurocalcin delta, [Score=82.0, Expect=8e-19]; ENSMUSG00000071379, Hpcal1, hippocalcin-like 1, [Score=80.5, Expect=4e-18]; ENSMUSG00000046093, Hpcal4, hippocalcin-like 4, [Score=80.1, Expect=5e-18]} {Dmel: FBgn0013303, Nca, Neurocalcin, [Score=84.0, Expect=1e-19]} {Celegans: WBGene00003563, ncs-1, Neuronal calcium sensor 1, [Score=67.0, Expect=2e-13]} {Smed: dd_Smed_v6_2568_0_1, dd_Smed_v6_2568_0_1, [Score=73.2, Expect=8e-16]} {RNA1310_101382}
77. MligTC455_52586 230 4.78 Mlig455_069158

Neo: -

Age: -

 0.958 - - - - - 0.958 Mlig455_069158 {REF} {Length: 3154} {RNA1509_45748, RNA1509_55217} {RNA1310_4688.1, RNA1509_45748} {RNA1509_45748, RNA815_38425}
78. MligTC455_10585 40 0.84 Mlig455_050448

Neo: -

Age: -

 0.957 - - - - - 0.957 Mlig455_050448 {REF} {Length: 296} {NoTransDecoderORF}
79. MligTC455_16526 125 2.61 Mlig455_026747, Mlig455_051738, Mlig455_051739, Mlig455_051760

Neo: -

Age: Up-Down-Down

 GABRG3 0.957 - - - - - 0.957

Mlig455_026747 {REF} {Length: 6317} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=31.9]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=25.1]} {Human: ENSG00000182256, GABRG3, gamma-aminobutyric acid type A receptor gamma3 subunit, [Score=57.8, Expect=4e-08]; ENSG00000113327, GABRG2, gamma-aminobutyric acid type A receptor gamma2 subunit, [Score=57.4, Expect=5e-08]} {Mouse: ENSMUSG00000055026, Gabrg3, gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3, [Score=60.8, Expect=3e-09]} {Celegans: WBGene00001512, gab-1, Gamma-aminobutyric acid receptor subunit beta, [Score=49.3, Expect=7e-06]} {Smed: dd_Smed_v6_10171_0_1, dd_Smed_v6_10171_0_1, [Score=517, Expect=2e-177]} {RNA1310_24908.1} {RNA815_12627}

Mlig455_051738 {REF} {Length: 1364} {RNA1310_43175} {RNA815_39065}

Mlig455_051739 {REF} {Length: 2058} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=32.3]} {Human: ENSG00000182256, GABRG3, gamma-aminobutyric acid type A receptor gamma3 subunit, [Score=58.9, Expect=1e-08]} {Mouse: ENSMUSG00000055026, Gabrg3, gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3, [Score=62.8, Expect=5e-10]} {Smed: dd_Smed_v6_10171_0_1, dd_Smed_v6_10171_0_1, [Score=532, Expect=0.0]} {RNA1310_16047} {RNA815_12627}

Mlig455_051760 {REF} {Length: 5962} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=32.2]} {Human: ENSG00000182256, GABRG3, gamma-aminobutyric acid type A receptor gamma3 subunit, [Score=72.8, Expect=5e-13]; ENSG00000113327, GABRG2, gamma-aminobutyric acid type A receptor gamma2 subunit, [Score=69.7, Expect=5e-12]} {Mouse: ENSMUSG00000055026, Gabrg3, gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3, [Score=77.0, Expect=2e-14]} {Dmel: FBgn0030707, CG8916, [Score=60.5, Expect=2e-09]} {Celegans: WBGene00001512, gab-1, Gamma-aminobutyric acid receptor subunit beta, [Score=57.8, Expect=1e-08]} {Smed: dd_Smed_v6_10171_0_1, dd_Smed_v6_10171_0_1, [RH, Score=573, Expect=0.0]} {RNA1310_24908.1} {RNA815_12627}
80. MligTC455_27650 178 3.72 Mlig455_017720

Neo: -

Age: logFC(26M/2M)=-0.928

Region-enriched R2: 3.586/0.00082

 ADAM33 0.957 - - - - - 0.957 Mlig455_017720 {REF} {Length: 4499} {Pfam: Reprolysin (M12B) family zinc metalloprotease [PF01421.21, score=124.3]; Disintegrin [PF00200.25, score=66.8]; Metallo-peptidase family M12 [PF13688.8, score=62.2]; ADAM cysteine-rich [PF08516.14, score=61.3]; Metallo-peptidase family M12B Reprolysin-like [PF13582.8, score=33.1]} {Human: ENSG00000149451, ADAM33, ADAM metallopeptidase domain 33, [Score=237, Expect=1e-64]; ENSG00000151651, ADAM8, ADAM metallopeptidase domain 8, [Score=233, Expect=2e-63]; ENSG00000168615, ADAM9, ADAM metallopeptidase domain 9, [Score=230, Expect=2e-62]; ENSG00000148848, ADAM12, ADAM metallopeptidase domain 12, [Score=228, Expect=4e-61]; ENSG00000069206, ADAM7, ADAM metallopeptidase domain 7, [Score=226, Expect=4e-61]; ENSG00000042980, ADAM28, ADAM metallopeptidase domain 28, [Score=226, Expect=4e-61]} {Mouse: ENSMUSG00000079058, Adam34, a disintegrin and metallopeptidase domain 34, [RH, Score=248, Expect=4e-69]; ENSMUSG00000050190, Gm5346, predicted gene 5346, [RH, Score=239, Expect=3e-66]} {Dmel: FBgn0265140, Meltrin, [RH, Score=288, Expect=1e-79]} {Celegans: WBGene00000074, adm-2, ADAM (Disintegrin plus metalloprotease) family, [Score=246, Expect=3e-67]} {Smed: dd_Smed_v6_5143_0_1, dd_Smed_v6_5143_0_1, [Score=225, Expect=3e-60]} {RNA1509_7654} {RNA1310_9319.1} {RNA815_4173.1}
81. MligTC455_51767 30 0.62 Mlig455_023694

Neo: -

Age: -

Region-enriched R2: 5.569/0.03615

 0.957 - - - - - 0.957 Mlig455_023694 {REF} {Length: 2173} {RNA1310_38328.1} {RNA815_53470}
82. MligTC455_53321 59 1.24 Mlig455_046286

Neo: -

Age: -

Region-enriched R4: 6.404/0.01336

 0.957 - - - - - 0.957 Mlig455_046286 {REF} {Length: 1085} {RNA1509_49086} {RNA1310_87385, RNA1509_49086}
83. MligTC455_01122 9 0.19 Mlig455_050074

Neo: -

Age: -

 0.956 - - - - - 0.956 Mlig455_050074 {REF} {Length: 752} {NoTransDecoderORF} {RNA1509_32122} {RNA1310_75878} {RNA815_35548}
84. MligTC455_09356 14 0.29 Mlig455_049750

Neo: -

Age: -

Regeneration-upregulated R2: 5.695

Regeneration-enriched R2: 5.695

 0.956 - - - - - 0.956 Mlig455_049750 {REF} {Length: 377} {RNA1310_75863}
85. MligTC455_18920 299 6.22 Mlig455_052039

Neo: -

Age: Down-Up-Down

Region-enriched R8: 3.175/0.01587

 RTN4R 0.956 - - - - - 0.956 Mlig455_052039 {REF} {Length: 1911} {Pfam: Leucine rich repeat [PF13855.8, score=113.0]; Leucine Rich repeats (2 copies) [PF12799.9, score=46.5]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=24.5]} {Human: ENSG00000040608, RTN4R, reticulon 4 receptor, [Score=73.2, Expect=2e-13]} {Mouse: ENSMUSG00000111113, Rtn4r, reticulon 4 receptor, [Score=72.8, Expect=2e-13]; ENSMUSG00000043811, Rtn4r, reticulon 4 receptor, [Score=72.8, Expect=2e-13]} {Dmel: FBgn0004364, 18w, 18 wheeler, [Score=71.2, Expect=7e-13]} {Celegans: WBGene00001443, fli-1, Protein flightless-1 homolog, [Score=56.6, Expect=2e-08]} {Smed: dd_Smed_v6_12111_0_1, dd_Smed_v6_12111_0_1, [Score=48.1, Expect=8e-06]} {RNA1310_19257.1} {RNA815_9099}
86. MligTC455_19235 18 0.38 Mlig455_013768

Neo: -

Age: -

 0.956 - - - - - 0.956 Mlig455_013768 {REF} {Length: 2312} {Pfam: Glycine rich protein [PF12810.9, score=36.9]; PAN domain [PF00024.28, score=24.7]} {RNA1310_126710} {RNA815_35307}
87. MligTC455_22946 21 0.44 Mlig455_066564

Neo: -

Age: -

 0.956 - - - - - 0.956 Mlig455_066564 {REF} {Length: 759} {Pfam: PLAC8 family [PF04749.19, score=62.9]} {Mouse: ENSMUSG00000029322, Plac8, placenta-specific 8, [Score=52.4, Expect=3e-09]} {Smed: dd_Smed_v6_5193_0_1, dd_Smed_v6_5193_0_1, [RH, Score=92.8, Expect=8e-25]} {RNA1310_58722} {RNA815_38160}
88. MligTC455_34727 96 2 Mlig455_041259

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.811

Region-enriched R8: 4.340/0.01025

 GLIPR1 0.956 - - - - - 0.956 Mlig455_041259 {REF} {Length: 5028} {Pfam: Cysteine-rich secretory protein family [PF00188.28, score=67.4]} {Human: ENSG00000139278, GLIPR1, GLI pathogenesis related 1, [RH, Score=98.6, Expect=2e-22]} {Mouse: ENSMUSG00000056888, Glipr1, GLI pathogenesis-related 1 (glioma), [RH, Score=107, Expect=7e-26]} {Dmel: FBgn0038126, CG8483, [Score=52.8, Expect=5e-07]} {Celegans: WBGene00003055, lon-1, LONg, [Score=67.0, Expect=6e-12]} {Smed: dd_Smed_v6_681_0_1, dd_Smed_v6_681_0_1, [Score=104, Expect=1e-25]} {RNA1509_36146} {RNA1310_23199} {RNA815_7031}
89. MligTC455_18891 275 5.73 Mlig455_024941

Neo: -

Age: -

Region-enriched R2: 2.016/0.02450

 0.955 - - - - - 0.955 Mlig455_024941 {REF} {Length: 394} {NoTransDecoderORF} {RNA1509_45136} {RNA1310_56753} {RNA815_28269}
90. MligTC455_19552 288 6 Mlig455_055936, Mlig455_068188

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.424

Region-specific R2: 6.302

Region-enriched R2: 4.919/0.00633

Regeneration-depleted R4: -5.607
Regeneration-depleted R2: -3.270

 0.955 - - - - - 0.955

Mlig455_055936 {REF} {Length: 665} {RNA1310_71052} {RNA815_36745}

Mlig455_068188 {REF} {Length: 714} {RNA1310_71052} {RNA815_36745}
91. MligTC455_23599 300 6.25 Mlig455_025579

Neo: -

Age: Up-Down-Down

Region-enriched R8: 3.645/0.00082

 FBN2 0.955 - - - - - 0.955 Mlig455_025579 {REF} {Length: 10696} {Pfam: Calcium-binding EGF domain [PF07645.17, score=312.2]; Complement Clr-like EGF-like [PF12662.9, score=241.1]; Coagulation Factor Xa inhibitory site [PF14670.8, score=125.1]; EGF domain [PF12947.9, score=95.9]; EGF-like domain [PF00008.29, score=59.7]; Human growth factor-like EGF [PF12661.9, score=47.9]; Thrombospondin type 1 domain [PF00090.21, score=28.9]; MSP1 EGF domain 1 [PF12946.9, score=21.3]} {Human: ENSG00000138829, FBN2, fibrillin 2, [Score=250, Expect=2e-65]; ENSG00000166147, FBN1, fibrillin 1, [Score=248, Expect=1e-64]; ENSG00000142449, FBN3, fibrillin 3, [Score=243, Expect=3e-63]} {Mouse: ENSMUSG00000024598, Fbn2, fibrillin 2, [Score=253, Expect=1e-66]; ENSMUSG00000027204, Fbn1, fibrillin 1, [Score=251, Expect=5e-66]} {Dmel: FBgn0035798, frac, faulty attraction, [RH, Score=238, Expect=3e-62]} {Celegans: WBGene00001403, fbl-1, Fibulin-1, [Score=192, Expect=3e-50]} {Smed: dd_Smed_v6_2649_0_2, dd_Smed_v6_2649_0_2, [Score=294, Expect=3e-79]} {RNA1509_13106} {RNA1310_487} {RNA815_5734}
92. MligTC455_31274 21 0.44 Mlig455_026828, Mlig455_030868

Neo: -

Age: -

 JMJD6 0.955 - - - - - 0.955

Mlig455_026828 {REF} {Length: 2467} {Pfam: Cupin-like domain [PF13621.8, score=61.8]; JmjC domain, hydroxylase [PF02373.24, score=23.0]} {Human: ENSG00000070495, JMJD6, jumonji domain containing 6, arginine demethylase and lysine hydroxylase, [Score=58.5, Expect=5e-09]} {Mouse: ENSMUSG00000056962, Jmjd6, jumonji domain containing 6, [Score=57.0, Expect=7e-09]} {Dmel: FBgn0038948, PSR, phosphatidylserine receptor, [Score=56.2, Expect=2e-08]} {Celegans: WBGene00004205, psr-1, Bifunctional arginine demethylase and lysyl-hydroxylase psr-1, [Score=64.7, Expect=3e-11]} {Smed: dd_Smed_v6_12267_0_1, dd_Smed_v6_12267_0_1, [Score=251, Expect=8e-80]} {RNA1310_17984} {RNA815_15470}

Mlig455_030868 {REF} {Length: 2503} {Pfam: Cupin-like domain [PF13621.8, score=84.6]; JmjC domain, hydroxylase [PF02373.24, score=42.0]; Cupin superfamily protein [PF08007.14, score=22.1]} {Human: ENSG00000070495, JMJD6, jumonji domain containing 6, arginine demethylase and lysine hydroxylase, [Score=80.9, Expect=7e-16]} {Mouse: ENSMUSG00000056962, Jmjd6, jumonji domain containing 6, [Score=79.0, Expect=2e-15]} {Dmel: FBgn0038948, PSR, phosphatidylserine receptor, [Score=77.8, Expect=3e-15]} {Celegans: WBGene00004205, psr-1, Bifunctional arginine demethylase and lysyl-hydroxylase psr-1, [Score=87.0, Expect=2e-18]} {Smed: dd_Smed_v6_12267_0_1, dd_Smed_v6_12267_0_1, [RH, Score=327, Expect=8e-108]} {RNA1310_17984} {RNA815_15470}
93. MligTC455_39222 213 4.44 Mlig455_064653, Mlig455_064686

Neo: -

Age: -

Region-enriched R2: 4.317/0.00597

 0.955 - - - - - 0.955

Mlig455_064653 {REF} {Length: 2836} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=56.8]} {Mouse: ENSMUSG00000039079, Trhr2, thyrotropin releasing hormone receptor 2, [Score=58.9, Expect=6e-09]} {Dmel: FBgn0053696, CNMaR, CNMamide Receptor, [Score=73.6, Expect=8e-14]} {Celegans: WBGene00008885, F16C3.1, [Score=51.2, Expect=7e-07]} {Smed: dd_Smed_v6_13282_0_1, dd_Smed_v6_13282_0_1, [RH, Score=219, Expect=1e-66]} {RNA1509_56255} {RNA1310_13407} {RNA815_38407}

Mlig455_064686 {REF} {Length: 3820} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=56.8]} {Mouse: ENSMUSG00000039079, Trhr2, thyrotropin releasing hormone receptor 2, [Score=58.5, Expect=6e-09]} {Dmel: FBgn0053696, CNMaR, CNMamide Receptor, [Score=73.6, Expect=8e-14]} {Celegans: WBGene00008885, F16C3.1, [Score=51.2, Expect=8e-07]} {Smed: dd_Smed_v6_13282_0_1, dd_Smed_v6_13282_0_1, [RH, Score=219, Expect=1e-66]} {RNA1509_50956} {RNA1310_13407} {RNA815_38407}
94. MligTC455_43959 93 1.94 Mlig455_020049, Mlig455_022295

Neo: -

Age: Down-Up-Up

 0.955 - - - - - 0.955

Mlig455_020049 {REF} {Length: 1131} {RNA1509_47842} {RNA1310_6450.2} {RNA815_45397}

Mlig455_022295 {REF} {Length: 1494} {RNA1509_47842} {RNA1310_6450.2} {RNA815_45397}
95. MligTC455_44646 193 4.01 Mlig455_013515

Neo: -

Age: Down-Up-Down

 SCNN1B 0.955 - - - - - 0.955 Mlig455_013515 {REF} {Length: 2272} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=308.7]} {Human: ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [RH, Score=191, Expect=3e-52]} {Mouse: ENSMUSG00000030873, Scnn1b, sodium channel, nonvoltage-gated 1 beta, [RH, Score=188, Expect=3e-51]} {Dmel: FBgn0030795, ppk28, pickpocket 28, [Score=68.2, Expect=1e-11]} {Celegans: WBGene00012137, asic-2, Degenerin-like protein asic-2, [Score=143, Expect=2e-36]} {Smed: dd_Smed_v6_17021_0_1, dd_Smed_v6_17021_0_1, [Score=175, Expect=2e-47]} {RNA1509_52917} {RNA1310_12013.1, RNA1509_52917} {RNA1509_52917, RNA815_4777}
96. MligTC455_01364 31 0.65 Mlig455_036495

Neo: -

Age: -

Regeneration-upregulated R2: 5.378

Regeneration-enriched R2: 5.378

 0.954 - - - - - 0.954 Mlig455_036495 {REF} {Length: 214} {NoTransDecoderORF} {RNA1509_31401} {RNA1310_23407} {RNA815_7477.2}
97. MligTC455_08417 10 0.2 Mlig455_006446

Neo: -

Age: -

 0.954 - - - - - 0.954 Mlig455_006446 {REF} {Length: 1018} {RNA1509_43426} {RNA1310_119207} {RNA815_9415}
98. MligTC455_08796 92 1.91 Mlig455_005779

Neo: -

Age: Up-Down-Up

 0.954 - - - - 0.954 - Mlig455_005779 {REF} {Length: 406} {NoTransDecoderORF} {RNA1509_40279} {RNA1310_35227} {RNA815_50075}
99. MligTC455_15330 373 7.77 Mlig455_020220

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.289

 0.954 - - - - - 0.954 Mlig455_020220 {REF} {Length: 2115} {Pfam: Fas apoptotic inhibitory molecule (FAIM1) [PF06905.15, score=41.4]} {Smed: dd_Smed_v6_4798_0_1, dd_Smed_v6_4798_0_1, [RH, Score=82.0, Expect=3e-20]} {RNA1509_28885, RNA1509_54654} {RNA1310_42962.2, RNA1509_28885, RNA1509_54654} {RNA1509_28885, RNA1509_54654, RNA815_23071}
100. MligTC455_15463 64 1.33 Mlig455_034950

Neo: -

Age: -

 CALM1 0.954 - - - - - 0.954 Mlig455_034950 {REF} {Length: 937} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=45.2]; EF-hand domain [PF14658.8, score=33.0]; EF-hand domain [PF13405.8, score=27.4]; EF hand [PF00036.34, score=20.8]} {Human: ENSG00000198668, CALM1, calmodulin 1, [Score=92.4, Expect=8e-24]; ENSG00000160014, CALM3, calmodulin 3, [Score=92.4, Expect=8e-24]; ENSG00000143933, CALM2, calmodulin 2, [Score=92.4, Expect=8e-24]} {Mouse: ENSMUSG00000019370, Calm3, calmodulin 3, [Score=92.4, Expect=5e-24]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=92.4, Expect=5e-24]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=92.4, Expect=5e-24]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=91.3, Expect=2e-23]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=92.0, Expect=7e-24]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=91.7, Expect=6e-24]} {Smed: dd_Smed_v6_414_0_1, dd_Smed_v6_414_0_1, [Score=91.7, Expect=5e-24]} {RNA1310_73371}

There are 50 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA