Data search
Results for MligTC455_29352
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_29352 | 125 | 2.60 | Mlig455_006316 | Neo: - Age: Up-Down-Down Regeneration-upregulated R4: 4.341 Regeneration-enriched R4: 4.341 |
Mlig455_006316 {REF} {Length: 1920} {RNA1509_9793} {RNA1310_2481, RNA1509_9793} {RNA1509_9793, RNA815_1756} |
Cumulative graph for MligTC455_29352
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.961 | 2.084 | 0.99963 | 1.00000 | |
| RegionR2 | 1.555 | 2.084 | 0.25877 | 0.63969 | |
| RegionR3 | 0.075 | 2.084 | 0.76265 | 1.00000 | |
| RegionR4 | -1.734 | 2.084 | 0.98939 | 1.00000 | |
| RegionR5 | 1.312 | 2.084 | 0.22301 | 0.52573 | |
| RegionR6 | 1.471 | 2.084 | 0.23091 | 0.81518 | |
| RegionR7 | -2.59 | 2.084 | 0.99955 | 1.00000 | |
| RegionR8 | 2.872 | 2.084 | 0.13115 | 0.66307 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.621 | 2.084 | 0.99992 | 1.00000 | |
| RegenerationR2 | 1.774 | 2.084 | 0.02158 | 0.24125 | |
| RegenerationR3 | 2.406 | 2.084 | 0.05073 | 0.39043 | |
| RegenerationR4 | 4.341 | 2.084 | 0.00009 | 0.00658 | Specific for R4: 4.341 |
| RegenerationR5 | 1.658 | 2.084 | 0.06395 | 0.39963 | |
| RegenerationR6 | 2.209 | 2.084 | 0.01956 | 0.17262 | |
| RegenerationBL | 2.889 | 2.084 | 0.02876 | 0.18844 | |
| RegenerationTP | 3.267 | 2.084 | 0.04892 | 0.36302 |
Genes with expression patterns similar to MligTC455_29352
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_29352 | 125 | 2.6 | Mlig455_006316 | Neo: - Age: Up-Down-Down Regeneration-upregulated R4: 4.341 Regeneration-enriched R4: 4.341 |
4 | - | - | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_006316 {REF} {Length: 1920} {RNA1509_9793} {RNA1310_2481, RNA1509_9793} {RNA1509_9793, RNA815_1756} | |
| 2. | MligTC455_49783 | 2785 | 58.03 | Mlig455_043327 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.545 Region-enriched R4: 2.687/0.00159 |
SQSTM1 | 1.713 | - | - | 0.760 | - | 0.953 | - | Mlig455_043327 {REF} {Length: 2615} {Pfam: Zinc finger, ZZ type [PF00569.19, score=39.0]} {Human: ENSG00000161011, SQSTM1, sequestosome 1, [RH, Score=65.5, Expect=7e-12]} {Mouse: ENSMUSG00000015837, Sqstm1, sequestosome 1, [Score=72.8, Expect=2e-13]} {Celegans: WBGene00012067, sqst-3, SeQueSTosome related, [RH, Score=57.8, Expect=3e-09]} {Smed: dd_Smed_v6_3712_0_1, dd_Smed_v6_3712_0_1, [RH, Score=57.4, Expect=3e-09]} {RNA1509_1501, RNA1509_26162, RNA1509_46437} {RNA1310_8305, RNA1509_26162, RNA1509_46437} {RNA1509_26162, RNA1509_46437, RNA815_9798.1} |
| 3. | MligTC455_37387 | 77 | 1.6 | Mlig455_052015, Mlig455_052090 | Neo: - Age: - |
TUB | 0.96 | - | - | 0.960 | - | - | - | Mlig455_052015 {REF} {Length: 2427} {TRANSSPLICED} {Pfam: Tub family [PF01167.20, score=283.8]} {Human: ENSG00000166402, TUB, tubby bipartite transcription factor, [Score=352, Expect=5e-117]} {Mouse: ENSMUSG00000031028, Tub, tubby bipartite transcription factor, [Score=349, Expect=4e-117]; ENSMUSG00000001521, Tulp3, tubby-like protein 3, [Score=341, Expect=7e-114]} {Dmel: FBgn0015721, ktub, king tubby, [Score=324, Expect=3e-107]} {Celegans: WBGene00006655, tub-1, Tubby protein homolog 1, [Score=299, Expect=3e-98]} {Smed: dd_Smed_v6_11228_0_1, dd_Smed_v6_11228_0_1, [Score=392, Expect=3e-134]} {RNA1509_46254} {RNA1310_10312.1} {RNA815_28323} Mlig455_052090 {REF} {Length: 2757} {TRANSSPLICED} {Pfam: Tub family [PF01167.20, score=283.8]} {Human: ENSG00000166402, TUB, tubby bipartite transcription factor, [Score=352, Expect=3e-117]} {Mouse: ENSMUSG00000031028, Tub, tubby bipartite transcription factor, [Score=349, Expect=5e-117]; ENSMUSG00000001521, Tulp3, tubby-like protein 3, [Score=341, Expect=7e-114]} {Dmel: FBgn0015721, ktub, king tubby, [Score=323, Expect=3e-107]} {Celegans: WBGene00006655, tub-1, Tubby protein homolog 1, [Score=299, Expect=3e-98]} {Smed: dd_Smed_v6_11228_0_1, dd_Smed_v6_11228_0_1, [Score=394, Expect=4e-135]} {RNA1509_46254} {RNA1310_10312.1, RNA1509_46254} {RNA1509_46254, RNA815_28323} |
| 4. | MligTC455_18057 | 935 | 19.47 | Mlig455_061798 | Neo: Neoblast, stringent Age: Up-Down-Down Region-enriched R4: 1.700/0.00368 Regeneration-upregulated BL: 2.017 Regeneration-enriched BL: 2.017 |
0.958 | - | - | - | - | - | 0.958 | Mlig455_061798 {REF} {Length: 2074} {TRANSSPLICED} {Pfam: DNA photolyase [PF00875.20, score=102.6]} {Mouse: ENSMUSG00000068742, Cry2, cryptochrome 2 (photolyase-like), [Score=51.6, Expect=2e-06]} {Dmel: FBgn0003082, phr, photorepair, [RH, Score=578, Expect=0.0]} {Smed: dd_Smed_v6_2829_0_2, dd_Smed_v6_2829_0_2, [RH, Score=558, Expect=0.0]} {RNA1509_37002, RNA1509_9960} {RNA1310_12679.1, RNA1509_37002, RNA1509_9960} {RNA1509_37002, RNA1509_9960, RNA815_4352.1} | |
| 5. | MligTC455_22305 | 225 | 4.69 | Mlig455_005800, Mlig455_005827, Mlig455_059409 | Neo: - Age: Up-Down-Down |
ZNFX1 | 0.956 | - | - | - | 0.956 | - | - | Mlig455_005800 {REF} {Length: 7119} {Pfam: Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=100.6]; AAA domain [PF13086.8, score=79.8]; AAA domain [PF13245.8, score=32.3]; AAA domain [PF13604.8, score=24.4]; PhoH-like protein [PF02562.18, score=19.0]; AAA domain [PF13401.8, score=18.9]} {Human: ENSG00000124201, ZNFX1, zinc finger NFX1-type containing 1, [Score=119, Expect=5e-26]} {Mouse: ENSMUSG00000039501, Znfx1, zinc finger, NFX1-type containing 1, [Score=124, Expect=1e-27]} {Dmel: FBgn0039165, CG6204, [Score=152, Expect=6e-37]} {Celegans: WBGene00014208, ZK1067.2, [Score=107, Expect=6e-23]} {Smed: dd_Smed_v6_11824_0_1, dd_Smed_v6_11824_0_1, [Score=163, Expect=4e-40]} {RNA1509_16749} {RNA1310_282.2} {RNA815_251.1} Mlig455_005827 {REF} {Length: 1755} {RNA1509_44728} {RNA1310_13320} {RNA815_24343} Mlig455_059409 {REF} {Length: 6443} {Pfam: Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=81.5]; AAA domain [PF13086.8, score=73.7]; AAA domain [PF13245.8, score=31.5]; AAA domain [PF13604.8, score=21.2]; AAA domain [PF13401.8, score=19.3]; PhoH-like protein [PF02562.18, score=18.7]} {Human: ENSG00000124201, ZNFX1, zinc finger NFX1-type containing 1, [Score=118, Expect=9e-26]} {Mouse: ENSMUSG00000039501, Znfx1, zinc finger, NFX1-type containing 1, [Score=123, Expect=2e-27]} {Dmel: FBgn0039165, CG6204, [Score=134, Expect=2e-31]} {Celegans: WBGene00014208, ZK1067.2, [Score=107, Expect=8e-23]} {Smed: dd_Smed_v6_11824_0_1, dd_Smed_v6_11824_0_1, [Score=158, Expect=1e-38]} {RNA1509_16749} {RNA1310_282.1} {RNA815_251.1} |
| 6. | MligTC455_23919 | 451 | 9.4 | Mlig455_030507 | Neo: - Age: - Region-enriched R5: 1.291/0.00079 |
0.956 | - | - | - | 0.956 | - | - | Mlig455_030507 {REF} {Length: 3769} {Pfam: Methyltransferase domain [PF13649.8, score=46.7]; Methyltransferase domain [PF08241.14, score=43.3]; Transposase protein [PF12017.10, score=29.1]; Methyltransferase domain [PF08242.14, score=27.0]; Methyltransferase domain [PF13489.8, score=21.1]} {RNA1509_46318} {RNA1310_38338} {RNA815_5315} | |
| 7. | MligTC455_35348 | 421 | 8.76 | Mlig455_048718 | Neo: Germline Age: Up-Up-Down |
0.955 | - | - | - | - | - | 0.955 | Mlig455_048718 {REF} {Length: 4867} {TRANSSPLICED} {Mouse: ENSMUSG00000022957, Itsn1, intersectin 1 (SH3 domain protein 1A), [Score=52.0, Expect=5e-06]} {RNA1509_24706, RNA1509_51170} {RNA1310_10906, RNA1509_24706} {RNA1509_24706, RNA815_6370.1} | |
| 8. | MligTC455_26429 | 2352 | 49.01 | Mlig455_031830 | Neo: - Age: Up-Down-Up |
VPS13C | 0.951 | - | - | - | - | 0.951 | - | Mlig455_031830 {REF} {Length: 3571} {Pfam: First Longin domain of INTU, CCZ1 and HPS4 [PF19031.2, score=34.3]} {Human: ENSG00000129003, VPS13C, vacuolar protein sorting 13 homolog C, [Score=55.5, Expect=3e-07]; ENSG00000197969, VPS13A, vacuolar protein sorting 13 homolog A, [Score=52.8, Expect=2e-06]} {Mouse: ENSMUSG00000035284, Vps13c, vacuolar protein sorting 13C, [Score=56.2, Expect=1e-07]} {Dmel: FBgn0033194, Vps13, Vacuolar protein sorting 13, [Score=59.3, Expect=9e-09]} {RNA1509_56944} {RNA1310_9435} {RNA815_39.1} |
| 9. | MligTC455_16727 | 150 | 3.13 | Mlig455_001964 | Neo: - Age: - |
0.95 | - | - | - | - | - | 0.950 | Mlig455_001964 {REF} {Length: 1692} {RNA1509_60018} {RNA1310_78911} {RNA815_36932.1} |