TomoSeq data search

Data search

Results for MligTC455_37387

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_37387	77	1.60	Mlig455_052015, Mlig455_052090	Neo: - Age: -	TUB	Mlig455_052015 {REF} {Length: 2427} {TRANSSPLICED} {Pfam: Tub family [PF01167.20, score=283.8]} {Human: ENSG00000166402, TUB, tubby bipartite transcription factor, [Score=352, Expect=5e-117]} {Mouse: ENSMUSG00000031028, Tub, tubby bipartite transcription factor, [Score=349, Expect=4e-117]; ENSMUSG00000001521, Tulp3, tubby-like protein 3, [Score=341, Expect=7e-114]} {Dmel: FBgn0015721, ktub, king tubby, [Score=324, Expect=3e-107]} {Celegans: WBGene00006655, tub-1, Tubby protein homolog 1, [Score=299, Expect=3e-98]} {Smed: dd_Smed_v6_11228_0_1, dd_Smed_v6_11228_0_1, [Score=392, Expect=3e-134]} {RNA1509_46254} {RNA1310_10312.1} {RNA815_28323} Mlig455_052090 {REF} {Length: 2757} {TRANSSPLICED} {Pfam: Tub family [PF01167.20, score=283.8]} {Human: ENSG00000166402, TUB, tubby bipartite transcription factor, [Score=352, Expect=3e-117]} {Mouse: ENSMUSG00000031028, Tub, tubby bipartite transcription factor, [Score=349, Expect=5e-117]; ENSMUSG00000001521, Tulp3, tubby-like protein 3, [Score=341, Expect=7e-114]} {Dmel: FBgn0015721, ktub, king tubby, [Score=323, Expect=3e-107]} {Celegans: WBGene00006655, tub-1, Tubby protein homolog 1, [Score=299, Expect=3e-98]} {Smed: dd_Smed_v6_11228_0_1, dd_Smed_v6_11228_0_1, [Score=394, Expect=4e-135]} {RNA1509_46254} {RNA1310_10312.1, RNA1509_46254} {RNA1509_46254, RNA815_28323}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_37387

1.60

Mlig455_052015, Mlig455_052090

Neo: -

Age: -

TUB

Mlig455_052015 {REF} {Length: 2427} {TRANSSPLICED} {Pfam: Tub family [PF01167.20, score=283.8]} {Human: ENSG00000166402, TUB, tubby bipartite transcription factor, [Score=352, Expect=5e-117]} {Mouse: ENSMUSG00000031028, Tub, tubby bipartite transcription factor, [Score=349, Expect=4e-117]; ENSMUSG00000001521, Tulp3, tubby-like protein 3, [Score=341, Expect=7e-114]} {Dmel: FBgn0015721, ktub, king tubby, [Score=324, Expect=3e-107]} {Celegans: WBGene00006655, tub-1, Tubby protein homolog 1, [Score=299, Expect=3e-98]} {Smed: dd_Smed_v6_11228_0_1, dd_Smed_v6_11228_0_1, [Score=392, Expect=3e-134]} {RNA1509_46254} {RNA1310_10312.1} {RNA815_28323}

Mlig455_052090 {REF} {Length: 2757} {TRANSSPLICED} {Pfam: Tub family [PF01167.20, score=283.8]} {Human: ENSG00000166402, TUB, tubby bipartite transcription factor, [Score=352, Expect=3e-117]} {Mouse: ENSMUSG00000031028, Tub, tubby bipartite transcription factor, [Score=349, Expect=5e-117]; ENSMUSG00000001521, Tulp3, tubby-like protein 3, [Score=341, Expect=7e-114]} {Dmel: FBgn0015721, ktub, king tubby, [Score=323, Expect=3e-107]} {Celegans: WBGene00006655, tub-1, Tubby protein homolog 1, [Score=299, Expect=3e-98]} {Smed: dd_Smed_v6_11228_0_1, dd_Smed_v6_11228_0_1, [Score=394, Expect=4e-135]} {RNA1509_46254} {RNA1310_10312.1, RNA1509_46254} {RNA1509_46254, RNA815_28323}

Cumulative graph for MligTC455_37387

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-3.188	1.887	0.99965	1.00000
RegionR2	0.961	1.887	0.51193	0.88934
RegionR3	0.072	1.887	0.76050	1.00000
RegionR4	1.372	1.887	0.37717	0.70125
RegionR5	1.473	1.887	0.24659	0.56055
RegionR6	2.262	1.887	0.07140	0.49757
RegionR7	0.73	1.887	0.60640	1.00000
RegionR8	-3.682	1.887	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.384	1.887	0.99997	1.00000
RegenerationR2	0.832	1.887	0.42214	0.82874
RegenerationR3	1.77	1.887	0.17406	0.61036
RegenerationR4	-0.809	1.887	0.56467	0.89903
RegenerationR5	1.017	1.887	0.35940	0.77089
RegenerationR6	-0.859	1.887	0.47250	0.78606
RegenerationBL	0.617	1.887	0.66823	1.00000
RegenerationTP	3.13	1.887	0.15851	0.58627

Genes with expression patterns similar to MligTC455_37387

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_37387	77	1.6	Mlig455_052015, Mlig455_052090	Neo: - Age: -	TUB	5	-	1.000	1.000	1.000	1.000	1.000	Mlig455_052015 {REF} {Length: 2427} {TRANSSPLICED} {Pfam: Tub family [PF01167.20, score=283.8]} {Human: ENSG00000166402, TUB, tubby bipartite transcription factor, [Score=352, Expect=5e-117]} {Mouse: ENSMUSG00000031028, Tub, tubby bipartite transcription factor, [Score=349, Expect=4e-117]; ENSMUSG00000001521, Tulp3, tubby-like protein 3, [Score=341, Expect=7e-114]} {Dmel: FBgn0015721, ktub, king tubby, [Score=324, Expect=3e-107]} {Celegans: WBGene00006655, tub-1, Tubby protein homolog 1, [Score=299, Expect=3e-98]} {Smed: dd_Smed_v6_11228_0_1, dd_Smed_v6_11228_0_1, [Score=392, Expect=3e-134]} {RNA1509_46254} {RNA1310_10312.1} {RNA815_28323} Mlig455_052090 {REF} {Length: 2757} {TRANSSPLICED} {Pfam: Tub family [PF01167.20, score=283.8]} {Human: ENSG00000166402, TUB, tubby bipartite transcription factor, [Score=352, Expect=3e-117]} {Mouse: ENSMUSG00000031028, Tub, tubby bipartite transcription factor, [Score=349, Expect=5e-117]; ENSMUSG00000001521, Tulp3, tubby-like protein 3, [Score=341, Expect=7e-114]} {Dmel: FBgn0015721, ktub, king tubby, [Score=323, Expect=3e-107]} {Celegans: WBGene00006655, tub-1, Tubby protein homolog 1, [Score=299, Expect=3e-98]} {Smed: dd_Smed_v6_11228_0_1, dd_Smed_v6_11228_0_1, [Score=394, Expect=4e-135]} {RNA1509_46254} {RNA1310_10312.1, RNA1509_46254} {RNA1509_46254, RNA815_28323}
2.	MligTC455_43206	528	11.01	Mlig455_057920	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.327	CACNB2	0.965	-	-	-	-	-	0.965	Mlig455_057920 {REF} {Length: 4131} {Pfam: Guanylate kinase [PF00625.23, score=145.1]; Voltage gated calcium channel subunit beta domain 4Aa N terminal [PF12052.10, score=25.7]} {Human: ENSG00000165995, CACNB2, calcium voltage-gated channel auxiliary subunit beta 2, [RH, Score=475, Expect=2e-161]; ENSG00000067191, CACNB1, calcium voltage-gated channel auxiliary subunit beta 1, [RH, Score=456, Expect=5e-156]} {Mouse: ENSMUSG00000057914, Cacnb2, calcium channel, voltage-dependent, beta 2 subunit, [RH, Score=465, Expect=8e-158]; ENSMUSG00000020882, Cacnb1, calcium channel, voltage-dependent, beta 1 subunit, [RH, Score=454, Expect=2e-155]; ENSMUSG00000017412, Cacnb4, calcium channel, voltage-dependent, beta 4 subunit, [RH, Score=442, Expect=1e-150]} {Dmel: FBgn0259822, Ca-beta, Ca2+-channel-protein-beta-subunit, [RH, Score=482, Expect=2e-163]} {Celegans: WBGene00000368, ccb-1, Calcium Channel, Beta subunit, [RH, Score=446, Expect=3e-152]} {Smed: dd_Smed_v6_9267_0_1, dd_Smed_v6_9267_0_1, [RH, Score=471, Expect=6e-162]} {RNA1509_14590, RNA1509_38024, RNA1509_46998} {RNA1310_10661, RNA1509_38024, RNA1509_46998} {RNA1509_38024, RNA1509_46998, RNA815_4109}
3.	MligTC455_51984	22	0.47	Mlig455_043080	Neo: - Age: Down-Up-Down, logFC(26M/2M)=3.138		0.964	-	-	-	-	-	0.964	Mlig455_043080 {REF} {Length: 2180} {TRANSSPLICED} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=40.1]} {Smed: dd_Smed_v6_3423_0_1, dd_Smed_v6_3423_0_1, [Score=80.9, Expect=6e-18]} {RNA1509_23666} {RNA1310_19234.1} {RNA815_18307}
4.	MligTC455_29352	125	2.6	Mlig455_006316	Neo: - Age: Up-Down-Down Regeneration-upregulated R4: 4.341 Regeneration-enriched R4: 4.341		0.96	-	-	0.960	-	-	-	Mlig455_006316 {REF} {Length: 1920} {RNA1509_9793} {RNA1310_2481, RNA1509_9793} {RNA1509_9793, RNA815_1756}
5.	MligTC455_52806	65	1.35	Mlig455_061262	Neo: - Age: -		0.954	-	-	0.954	-	-	-	Mlig455_061262 {REF} {Length: 3333} {NoTransDecoderORF} {RNA1509_33264} {RNA1310_69399} {RNA815_9413.5}
6.	MligTC455_48169	64	1.34	Mlig455_056613	Neo: - Age: -		0.953	-	-	-	-	-	0.953	Mlig455_056613 {REF} {Length: 2684} {RNA1310_138829}
7.	MligTC455_22634	204	4.26	Mlig455_027696	Neo: - Age: Down-Down-Up	CCDC92	0.951	-	-	-	0.951	-	-	Mlig455_027696 {REF} {Length: 1900} {TRANSSPLICED} {Pfam: Coiled-coil domain of unknown function [PF14916.8, score=67.5]} {Human: ENSG00000275035, CCDC92, coiled-coil domain containing 92, [RH, Score=57.8, Expect=6e-09]; ENSG00000119242, CCDC92, coiled-coil domain containing 92, [RH, Score=57.8, Expect=6e-09]} {Mouse: ENSMUSG00000037979, Ccdc92, coiled-coil domain containing 92, [RH, Score=53.1, Expect=1e-07]} {Smed: dd_Smed_v6_15609_0_1, dd_Smed_v6_15609_0_1, [RH, Score=65.5, Expect=6e-12]} {RNA1310_28822} {RNA815_31004}