TomoSeq data search

Data search

Results for MligTC455_29924

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_29924

359

7.48

Mlig455_041388

Neo: -

Age: -

TRAPPC10

Mlig455_041388 {REF} {Length: 5701} {Human: ENSG00000160218, TRAPPC10, trafficking protein particle complex 10, [RH, Score=224, Expect=7e-59]} {Mouse: ENSMUSG00000000374, Trappc10, trafficking protein particle complex 10, [RH, Score=232, Expect=2e-61]} {Dmel: FBgn0038303, SIDL, Shal Interactor of Di-Leucine Motif, [RH, Score=171, Expect=7e-43]} {Smed: dd_Smed_v6_8662_0_2, dd_Smed_v6_8662_0_2, [RH, Score=196, Expect=9e-51]} {RNA1509_18412} {RNA1310_2459.1} {RNA815_6603}

Cumulative graph for MligTC455_29924

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.258	3.356	0.83254	1.00000
RegionR2	0.491	3.356	0.35622	0.75034
RegionR3	0.299	3.356	0.46335	0.97216
RegionR4	0.103	3.356	0.82478	1.00000
RegionR5	0.544	3.356	0.12924	0.36477
RegionR6	0.366	3.356	0.39301	0.96729
RegionR7	-2.517	3.356	0.00512	0.11221
RegionR8	0.456	3.356	0.51894	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-6.224	3.356	0.17995	0.92280
RegenerationR2	0.095	3.356	0.80445	0.99104
RegenerationR3	0.063	3.356	0.88560	1.00000
RegenerationR4	0.285	3.356	0.52618	0.88259
RegenerationR5	0.059	3.356	0.87325	1.00000
RegenerationR6	-0.027	3.356	0.95363	1.00000
RegenerationBL	0.484	3.356	0.51049	0.87397
RegenerationTP	0.428	3.356	0.61792	0.97124

Genes with expression patterns similar to MligTC455_29924

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_29924	359	7.48	Mlig455_041388	Neo: - Age: -	TRAPPC10	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_041388 {REF} {Length: 5701} {Human: ENSG00000160218, TRAPPC10, trafficking protein particle complex 10, [RH, Score=224, Expect=7e-59]} {Mouse: ENSMUSG00000000374, Trappc10, trafficking protein particle complex 10, [RH, Score=232, Expect=2e-61]} {Dmel: FBgn0038303, SIDL, Shal Interactor of Di-Leucine Motif, [RH, Score=171, Expect=7e-43]} {Smed: dd_Smed_v6_8662_0_2, dd_Smed_v6_8662_0_2, [RH, Score=196, Expect=9e-51]} {RNA1509_18412} {RNA1310_2459.1} {RNA815_6603}
2.	MligTC455_29926	376	7.84	Mlig455_069371	Neo: - Age: Up-Down-Down		5.955	0.990	0.998	0.999	0.991	0.983	0.994	Mlig455_069371 {REF} {Length: 5617} {RNA1509_6537} {RNA1310_5792} {RNA815_1502}
3.	MligTC455_39713	819	17.07	Mlig455_052903	Neo: Irradiation Age: - Region-enriched R5: 1.642/0.00008	XDH	1.781	-	-	0.955	-	-	0.826	Mlig455_052903 {REF} {Length: 5876} {Pfam: Molybdopterin-binding domain of aldehyde dehydrogenase [PF02738.20, score=420.6]; [2Fe-2S] binding domain [PF01799.22, score=86.8]; FAD binding domain in molybdopterin dehydrogenase [PF00941.23, score=83.9]; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain [PF01315.24, score=76.3]; CO dehydrogenase flavoprotein C-terminal domain [PF03450.19, score=71.3]; 2Fe-2S iron-sulfur cluster binding domain [PF00111.29, score=22.7]} {Human: ENSG00000158125, XDH, xanthine dehydrogenase, [Score=476, Expect=2e-145]; ENSG00000138356, AOX1, aldehyde oxidase 1, [Score=470, Expect=5e-143]} {Mouse: ENSMUSG00000024066, Xdh, xanthine dehydrogenase, [Score=484, Expect=2e-148]; ENSMUSG00000038242, Aox4, aldehyde oxidase 4, [Score=472, Expect=8e-144]} {Dmel: FBgn0267408, AOX1, Aldehyde oxidase 1, [Score=707, Expect=0.0]} {Celegans: WBGene00010083, xhd-1, [Score=530, Expect=2e-165]} {RNA1509_20651, RNA1509_30050, RNA1509_4282} {RNA1310_1564.1, RNA1509_20651, RNA1509_30050, RNA1509_4282} {RNA1509_20651, RNA1509_30050, RNA1509_4282, RNA815_637}
4.	MligTC455_21148	332	6.93	Mlig455_039576	Neo: - Age: - Region-enriched R4: 1.722/0.01281		0.967	-	-	-	-	-	0.967	Mlig455_039576 {REF} {Length: 4764} {TRANSSPLICED} {tRNA: Glu(TTC), score=70.7} {Pfam: Mediator complex subunit 25 von Willebrand factor type A [PF11265.10, score=33.5]} {Smed: dd_Smed_v6_10165_0_1, dd_Smed_v6_10165_0_1, [RH, Score=89.4, Expect=3e-18]} {RNA1509_59973} {RNA1310_5708, RNA1509_59973} {RNA1509_59973, RNA815_16377}
5.	MligTC455_37268	546	11.37	Mlig455_027676, Mlig455_047737	Neo: - Age: Up-Down-Up		0.965	-	-	-	-	-	0.965	Mlig455_027676 {REF} {Length: 2407} {TRANSSPLICED} {RNA1509_14326} {RNA1310_18383, RNA1509_14326} {RNA1509_14326, RNA815_12483.1} Mlig455_047737 {REF} {Length: 2406} {TRANSSPLICED} {RNA1509_14326, RNA1509_58667} {RNA1310_18383, RNA1509_58667} {RNA1509_58667, RNA815_12483.1}
6.	MligTC455_53440	498	10.38	Mlig455_031340	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.526	UBAC1	0.965	-	-	-	-	-	0.965	Mlig455_031340 {REF} {Length: 2689} {TRANSSPLICED} {Pfam: UBA/TS-N domain [PF00627.33, score=47.6]} {Human: ENSG00000130560, UBAC1, UBA domain containing 1, [RH, Score=117, Expect=2e-28]} {Mouse: ENSMUSG00000036352, Ubac1, ubiquitin associated domain containing 1, [RH, Score=119, Expect=3e-29]} {Smed: dd_Smed_v6_8499_0_2, dd_Smed_v6_8499_0_2, [RH, Score=139, Expect=7e-37]} {RNA1509_12437, RNA1509_26344} {RNA1310_10887, RNA1509_12437, RNA1509_26344} {RNA1509_12437, RNA1509_26344, RNA815_5171.1}
7.	MligTC455_52130	509	10.61	Mlig455_007249	Neo: Irradiation Age: -	KRI1	0.959	-	-	-	-	-	0.959	Mlig455_007249 {REF} {Length: 2519} {TRANSSPLICED} {Pfam: KRI1-like family C-terminal [PF12936.9, score=77.0]; KRI1-like family [PF05178.14, score=60.1]} {Human: ENSG00000129347, KRI1, KRI1 homolog, [RH, Score=85.5, Expect=1e-16]} {Mouse: ENSMUSG00000035047, Kri1, KRI1 homolog, [RH, Score=96.3, Expect=4e-20]} {Dmel: FBgn0036254, CG5645, [RH, Score=70.9, Expect=3e-12]} {Celegans: WBGene00010044, F54C9.9, [RH, Score=75.9, Expect=6e-14]} {Smed: dd_Smed_v6_8647_0_1, dd_Smed_v6_8647_0_1, [RH, Score=70.5, Expect=2e-12]} {RNA1509_9111} {RNA1310_8671.1} {RNA815_11251}

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