Data search
Results for MligTC455_29926
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_29926 | 376 | 7.84 | Mlig455_069371 | Neo: - Age: Up-Down-Down |
Mlig455_069371 {REF} {Length: 5617} {RNA1509_6537} {RNA1310_5792} {RNA815_1502} |
Cumulative graph for MligTC455_29926
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.273 | 3.415 | 0.81973 | 1.00000 | |
| RegionR2 | 0.459 | 3.415 | 0.37523 | 0.77003 | |
| RegionR3 | 0.28 | 3.415 | 0.47950 | 0.98254 | |
| RegionR4 | 0.149 | 3.415 | 0.74582 | 1.00000 | |
| RegionR5 | 0.536 | 3.415 | 0.12322 | 0.35280 | |
| RegionR6 | 0.377 | 3.415 | 0.36461 | 0.94599 | |
| RegionR7 | -2.504 | 3.415 | 0.00438 | 0.10007 | |
| RegionR8 | 0.43 | 3.415 | 0.53608 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.264 | 3.415 | 0.17334 | 0.91661 | |
| RegenerationR2 | 0.218 | 3.415 | 0.55244 | 0.89471 | |
| RegenerationR3 | 0.077 | 3.415 | 0.85582 | 0.99991 | |
| RegenerationR4 | 0.204 | 3.415 | 0.64099 | 0.92802 | |
| RegenerationR5 | 0.075 | 3.415 | 0.83276 | 0.99834 | |
| RegenerationR6 | 0.055 | 3.415 | 0.89894 | 1.00000 | |
| RegenerationBL | 0.44 | 3.415 | 0.54443 | 0.90254 | |
| RegenerationTP | 0.557 | 3.415 | 0.50125 | 0.90147 |
Genes with expression patterns similar to MligTC455_29926
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_29926 | 376 | 7.84 | Mlig455_069371 | Neo: - Age: Up-Down-Down |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_069371 {REF} {Length: 5617} {RNA1509_6537} {RNA1310_5792} {RNA815_1502} | |
| 2. | MligTC455_29924 | 359 | 7.48 | Mlig455_041388 | Neo: - Age: - |
TRAPPC10 | 5.955 | 0.990 | 0.998 | 0.999 | 0.991 | 0.983 | 0.994 | Mlig455_041388 {REF} {Length: 5701} {Human: ENSG00000160218, TRAPPC10, trafficking protein particle complex 10, [RH, Score=224, Expect=7e-59]} {Mouse: ENSMUSG00000000374, Trappc10, trafficking protein particle complex 10, [RH, Score=232, Expect=2e-61]} {Dmel: FBgn0038303, SIDL, Shal Interactor of Di-Leucine Motif, [RH, Score=171, Expect=7e-43]} {Smed: dd_Smed_v6_8662_0_2, dd_Smed_v6_8662_0_2, [RH, Score=196, Expect=9e-51]} {RNA1509_18412} {RNA1310_2459.1} {RNA815_6603} |
| 3. | MligTC455_37268 | 546 | 11.37 | Mlig455_027676, Mlig455_047737 | Neo: - Age: Up-Down-Up |
2.372 | - | - | - | 0.712 | 0.707 | 0.953 | Mlig455_027676 {REF} {Length: 2407} {TRANSSPLICED} {RNA1509_14326} {RNA1310_18383, RNA1509_14326} {RNA1509_14326, RNA815_12483.1} Mlig455_047737 {REF} {Length: 2406} {TRANSSPLICED} {RNA1509_14326, RNA1509_58667} {RNA1310_18383, RNA1509_58667} {RNA1509_58667, RNA815_12483.1} |
|
| 4. | MligTC455_39713 | 819 | 17.07 | Mlig455_052903 | Neo: Irradiation Age: - Region-enriched R5: 1.642/0.00008 |
XDH | 1.792 | - | - | 0.962 | - | - | 0.830 | Mlig455_052903 {REF} {Length: 5876} {Pfam: Molybdopterin-binding domain of aldehyde dehydrogenase [PF02738.20, score=420.6]; [2Fe-2S] binding domain [PF01799.22, score=86.8]; FAD binding domain in molybdopterin dehydrogenase [PF00941.23, score=83.9]; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain [PF01315.24, score=76.3]; CO dehydrogenase flavoprotein C-terminal domain [PF03450.19, score=71.3]; 2Fe-2S iron-sulfur cluster binding domain [PF00111.29, score=22.7]} {Human: ENSG00000158125, XDH, xanthine dehydrogenase, [Score=476, Expect=2e-145]; ENSG00000138356, AOX1, aldehyde oxidase 1, [Score=470, Expect=5e-143]} {Mouse: ENSMUSG00000024066, Xdh, xanthine dehydrogenase, [Score=484, Expect=2e-148]; ENSMUSG00000038242, Aox4, aldehyde oxidase 4, [Score=472, Expect=8e-144]} {Dmel: FBgn0267408, AOX1, Aldehyde oxidase 1, [Score=707, Expect=0.0]} {Celegans: WBGene00010083, xhd-1, [Score=530, Expect=2e-165]} {RNA1509_20651, RNA1509_30050, RNA1509_4282} {RNA1310_1564.1, RNA1509_20651, RNA1509_30050, RNA1509_4282} {RNA1509_20651, RNA1509_30050, RNA1509_4282, RNA815_637} |
| 5. | MligTC455_36418 | 922 | 19.2 | Mlig455_061026 | Neo: - Age: Up-Down-Up |
ACLY | 1.758 | - | - | 0.806 | 0.952 | - | - | Mlig455_061026 {REF} {Length: 2260} {Pfam: Citrate synthase, C-terminal domain [PF00285.23, score=26.2]} {Human: ENSG00000131473, ACLY, ATP citrate lyase, [Score=233, Expect=2e-72]} {Mouse: ENSMUSG00000020917, Acly, ATP citrate lyase, [Score=233, Expect=1e-71]} {Dmel: FBgn0020236, ATPCL, ATP citrate lyase, [Score=218, Expect=2e-66]} {Celegans: WBGene00007150, acly-2, ATP-citrate synthase, [Score=202, Expect=6e-61]} {Smed: dd_Smed_v6_5364_0_1, dd_Smed_v6_5364_0_1, [Score=220, Expect=2e-67]} {RNA1509_21348} {RNA1310_9723} {RNA815_1016} |
| 6. | MligTC455_53440 | 498 | 10.38 | Mlig455_031340 | Neo: - |
UBAC1 | 0.967 | - | - | - | - | - | 0.967 | Mlig455_031340 {REF} {Length: 2689} {TRANSSPLICED} {Pfam: UBA/TS-N domain [PF00627.33, score=47.6]} {Human: ENSG00000130560, UBAC1, UBA domain containing 1, [RH, Score=117, Expect=2e-28]} {Mouse: ENSMUSG00000036352, Ubac1, ubiquitin associated domain containing 1, [RH, Score=119, Expect=3e-29]} {Smed: dd_Smed_v6_8499_0_2, dd_Smed_v6_8499_0_2, [RH, Score=139, Expect=7e-37]} {RNA1509_12437, RNA1509_26344} {RNA1310_10887, RNA1509_12437, RNA1509_26344} {RNA1509_12437, RNA1509_26344, RNA815_5171.1} |
| 7. | MligTC455_21148 | 332 | 6.93 | Mlig455_039576 | Neo: - Age: - Region-enriched R4: 1.722/0.01281 |
0.965 | - | - | - | - | - | 0.965 | Mlig455_039576 {REF} {Length: 4764} {TRANSSPLICED} {tRNA: Glu(TTC), score=70.7} {Pfam: Mediator complex subunit 25 von Willebrand factor type A [PF11265.10, score=33.5]} {Smed: dd_Smed_v6_10165_0_1, dd_Smed_v6_10165_0_1, [RH, Score=89.4, Expect=3e-18]} {RNA1509_59973} {RNA1310_5708, RNA1509_59973} {RNA1509_59973, RNA815_16377} | |
| 8. | MligTC455_27770 | 1266 | 26.38 | Mlig455_010018, Mlig455_010060 | Neo: - Age: Up-Down-Down |
0.958 | - | - | - | - | - | 0.958 | Mlig455_010018 {REF} {Length: 619} {NoTransDecoderORF} {RNA1509_10541} {RNA1310_134190} {RNA815_62379} Mlig455_010060 {REF} {Length: 1317} {NoTransDecoderORF} {RNA1509_10541} {RNA1310_120490} {RNA815_62379} |
|
| 9. | MligTC455_21092 | 581 | 12.11 | Mlig455_014955 | Neo: - Age: - |
LRP3 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_014955 {REF} {Length: 2087} {TRANSSPLICED} {Pfam: Low-density lipoprotein receptor domain class A [PF00057.20, score=53.2]} {Human: ENSG00000130881, LRP3, LDL receptor related protein 3, [Score=115, Expect=1e-27]} {Mouse: ENSMUSG00000001802, Lrp3, low density lipoprotein receptor-related protein 3, [RH, Score=114, Expect=1e-27]} {Dmel: FBgn0053087, LRP1, LDL receptor protein 1, [Score=71.6, Expect=3e-13]} {Celegans: WBGene00003072, lrp-2, Low-density lipoprotein RecePtor related, [Score=73.6, Expect=6e-14]} {Smed: dd_Smed_v6_6784_0_1, dd_Smed_v6_6784_0_1, [RH, Score=155, Expect=2e-43]} {RNA1509_31076} {RNA1310_16875.1} {RNA815_33006} |
| 10. | MligTC455_52130 | 509 | 10.61 | Mlig455_007249 | Neo: Irradiation Age: - |
KRI1 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_007249 {REF} {Length: 2519} {TRANSSPLICED} {Pfam: KRI1-like family C-terminal [PF12936.9, score=77.0]; KRI1-like family [PF05178.14, score=60.1]} {Human: ENSG00000129347, KRI1, KRI1 homolog, [RH, Score=85.5, Expect=1e-16]} {Mouse: ENSMUSG00000035047, Kri1, KRI1 homolog, [RH, Score=96.3, Expect=4e-20]} {Dmel: FBgn0036254, CG5645, [RH, Score=70.9, Expect=3e-12]} {Celegans: WBGene00010044, F54C9.9, [RH, Score=75.9, Expect=6e-14]} {Smed: dd_Smed_v6_8647_0_1, dd_Smed_v6_8647_0_1, [RH, Score=70.5, Expect=2e-12]} {RNA1509_9111} {RNA1310_8671.1} {RNA815_11251} |
| 11. | MligTC455_27771 | 668 | 13.92 | Mlig455_063260 | Neo: Int S/G2/M Age: Up-Down-Down Region-specific R4: 1.727 |
ZPR1 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_063260 {REF} {Length: 3090} {TRANSSPLICED} {Pfam: ZPR1 zinc-finger domain [PF03367.15, score=302.9]} {Human: ENSG00000109917, ZPR1, ZPR1 zinc finger, [RH, Score=351, Expect=1e-116]} {Mouse: ENSMUSG00000032078, Zpr1, ZPR1 zinc finger, [RH, Score=347, Expect=2e-115]} {Dmel: FBgn0030096, Zpr1, [RH, Score=324, Expect=2e-106]} {Celegans: WBGene00020999, W03F9.1, Zinc finger protein ZPR1 homolog, [RH, Score=289, Expect=5e-93]} {Smed: dd_Smed_v6_4302_0_1, dd_Smed_v6_4302_0_1, [RH, Score=370, Expect=9e-125]} {RNA1509_3847} {RNA1310_19011, RNA1509_3847} {RNA1509_3847, RNA815_8548} |
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