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Results for MligTC455_30072

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_30072 119 2.48 Mlig455_004854

Neo: -

Age: -

 TOP3A Mlig455_004854 {REF} {Length: 4031} {TRANSSPLICED} {Pfam: DNA topoisomerase [PF01131.22, score=365.2]; GRF zinc finger [PF06839.14, score=114.9]; Toprim domain [PF01751.24, score=65.1]; Topoisomerase DNA binding C4 zinc finger [PF01396.21, score=37.6]} {Human: ENSG00000177302, TOP3A, DNA topoisomerase III alpha, [RH, Score=942, Expect=0.0]; ENSG00000284238, TOP3A, DNA topoisomerase III alpha, [RH, Score=942, Expect=0.0]} {Mouse: ENSMUSG00000002814, Top3a, topoisomerase (DNA) III alpha, [Score=945, Expect=0.0]} {Dmel: FBgn0040268, Top3alpha, Topoisomerase 3alpha, [RH, Score=777, Expect=0.0]} {Celegans: WBGene00006596, top-3, DNA topoisomerase 3, [RH, Score=635, Expect=0.0]} {Smed: dd_Smed_v6_20479_0_1, dd_Smed_v6_20479_0_1, [RH, Score=640, Expect=0.0]} {RNA1509_11005, RNA1509_45373} {RNA1310_4689.1, RNA1509_45373} {RNA1509_45373, RNA815_5623}

Cumulative graph for MligTC455_30072

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.731 2.103 0.32552 0.97406
RegionR2 1.205 2.103 0.23285 0.60544
RegionR3 -0.189 2.103 0.86874 1.00000
RegionR4 0.446 2.103 0.56984 0.88818
RegionR5 0.679 2.103 0.36684 0.71946
RegionR6 -0.044 2.103 0.81907 1.00000
RegionR7 0.908 2.103 0.41000 1.00000
RegionR8 -4.736 2.103 0.14433 0.69336

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -5.563 2.103 0.29945 0.99611
RegenerationR2 -0.723 2.103 0.34486 0.77869
RegenerationR3 0.918 2.103 0.26910 0.70328
RegenerationR4 0.6 2.103 0.42588 0.82874
RegenerationR5 0.119 2.103 0.86228 1.00000
RegenerationR6 1.011 2.103 0.23058 0.57712
RegenerationBL 2.346 2.103 0.12299 0.41656
RegenerationTP 1.258 2.103 0.56220 0.93976


Genes with expression patterns similar to MligTC455_30072

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_30072 119 2.48 Mlig455_004854

Neo: -

Age: -

 TOP3A 5 1.000 1.000 - 1.000 1.000 1.000 Mlig455_004854 {REF} {Length: 4031} {TRANSSPLICED} {Pfam: DNA topoisomerase [PF01131.22, score=365.2]; GRF zinc finger [PF06839.14, score=114.9]; Toprim domain [PF01751.24, score=65.1]; Topoisomerase DNA binding C4 zinc finger [PF01396.21, score=37.6]} {Human: ENSG00000177302, TOP3A, DNA topoisomerase III alpha, [RH, Score=942, Expect=0.0]; ENSG00000284238, TOP3A, DNA topoisomerase III alpha, [RH, Score=942, Expect=0.0]} {Mouse: ENSMUSG00000002814, Top3a, topoisomerase (DNA) III alpha, [Score=945, Expect=0.0]} {Dmel: FBgn0040268, Top3alpha, Topoisomerase 3alpha, [RH, Score=777, Expect=0.0]} {Celegans: WBGene00006596, top-3, DNA topoisomerase 3, [RH, Score=635, Expect=0.0]} {Smed: dd_Smed_v6_20479_0_1, dd_Smed_v6_20479_0_1, [RH, Score=640, Expect=0.0]} {RNA1509_11005, RNA1509_45373} {RNA1310_4689.1, RNA1509_45373} {RNA1509_45373, RNA815_5623}
2. MligTC455_50094 148 3.09 Mlig455_042020

Neo: Irradiation

Age: -

Region-enriched R4: 2.698/0.01391

 RNF216 1.787 - - - 0.826 - 0.961 Mlig455_042020 {REF} {Length: 2245} {TRANSSPLICED} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=27.5]; FtsX extracellular domain [PF18075.3, score=19.7]} {Human: ENSG00000011275, RNF216, ring finger protein 216, [Score=174, Expect=5e-45]} {Mouse: ENSMUSG00000045078, Rnf216, ring finger protein 216, [Score=171, Expect=2e-44]} {Dmel: FBgn0025186, ari-2, ariadne 2, [Score=60.1, Expect=4e-09]} {Celegans: WBGene00016157, C27A12.7, [Score=67.0, Expect=2e-11]} {Smed: dd_Smed_v6_4224_0_1, dd_Smed_v6_4224_0_1, [Score=60.8, Expect=1e-09]} {RNA1509_15865} {RNA1310_11127} {RNA815_4010.1}
3. MligTC455_47579 133 2.76 Mlig455_041880

Neo: -

Age: Down-Up-Down

 1.707 - - - 0.749 - 0.958 Mlig455_041880 {REF} {Length: 2196} {TRANSSPLICED} {RNA1509_11215, RNA1509_36784} {RNA1310_37626, RNA1509_11215} {RNA1509_11215, RNA815_15592}
4. MligTC455_48812 343 7.14 Mlig455_023773

Neo: -

Age: -

 SYT3 1.697 - 0.745 - - - 0.952 Mlig455_023773 {REF} {Length: 4372} {Pfam: C2 domain [PF00168.32, score=98.7]} {Human: ENSG00000213023, SYT3, synaptotagmin 3, [Score=112, Expect=5e-25]} {Mouse: ENSMUSG00000030731, Syt3, synaptotagmin III, [Score=109, Expect=2e-24]} {Dmel: FBgn0261089, Sytalpha, Synaptotagmin alpha, [Score=152, Expect=7e-39]} {Celegans: WBGene00004926, snt-6, SyNapTotagmin, [Score=90.9, Expect=3e-19]} {Smed: dd_Smed_v6_12977_0_1, dd_Smed_v6_12977_0_1, [Score=68.6, Expect=9e-12]} {RNA1509_18500} {RNA1310_24981} {RNA815_6817}
5. MligTC455_50153 477 9.93 Mlig455_061605

Neo: -

Age: -

 BDH1 1.684 - - - - 0.716 0.968 Mlig455_061605 {REF} {Length: 1818} {TRANSSPLICED} {Pfam: short chain dehydrogenase [PF00106.27, score=138.9]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=92.3]; KR domain [PF08659.12, score=19.8]} {Human: ENSG00000161267, BDH1, 3-hydroxybutyrate dehydrogenase 1, [Score=170, Expect=5e-49]; ENSG00000275544, BDH1, 3-hydroxybutyrate dehydrogenase 1, [Score=170, Expect=5e-49]; ENSG00000025423, HSD17B6, hydroxysteroid 17-beta dehydrogenase 6, [Score=163, Expect=9e-47]} {Mouse: ENSMUSG00000046598, Bdh1, 3-hydroxybutyrate dehydrogenase, type 1, [Score=173, Expect=2e-50]} {Dmel: FBgn0033679, CG8888, [RH, Score=108, Expect=4e-26]} {Celegans: WBGene00000979, dhs-16, 3 beta-hydroxysteroid dehydrogenase dhs-16, [Score=135, Expect=7e-36]} {Smed: dd_Smed_v6_8012_0_1, dd_Smed_v6_8012_0_1, [RH, Score=147, Expect=5e-41]} {RNA1509_18804, RNA1509_53392} {RNA1310_15769, RNA1509_18804, RNA1509_53392} {RNA1509_18804, RNA1509_53392, RNA815_8900.1}
6. MligTC455_45646 1265 26.36 Mlig455_057121, Mlig455_069297

Neo: -

Age: -

Region-enriched R4: 1.525/0.00499

 PLEKHF2 0.992 - - - - - 0.992

Mlig455_057121 {REF} {Length: 2756} {TRANSSPLICED} {Pfam: FYVE zinc finger [PF01363.23, score=71.7]; PH domain [PF00169.31, score=34.2]; PH domain [PF14593.8, score=21.3]} {Human: ENSG00000175895, PLEKHF2, pleckstrin homology and FYVE domain containing 2, [RH, Score=221, Expect=8e-72]} {Mouse: ENSMUSG00000049969, Plekhf2, pleckstrin homology domain containing, family F (with FYVE domain) member 2, [RH, Score=220, Expect=1e-71]} {Dmel: FBgn0025381, rush, rush hour, [RH, Score=209, Expect=1e-66]} {Celegans: WBGene00014019, ZK632.12, [RH, Score=206, Expect=4e-66]} {Smed: dd_Smed_v6_6176_1_1, dd_Smed_v6_6176_1_1, [RH, Score=189, Expect=2e-59]} {RNA1509_20229} {RNA1310_12913.1} {RNA815_8773}

Mlig455_069297 {REF} {Length: 2751} {TRANSSPLICED} {Pfam: FYVE zinc finger [PF01363.23, score=71.7]; PH domain [PF00169.31, score=34.2]; PH domain [PF14593.8, score=21.3]} {Human: ENSG00000175895, PLEKHF2, pleckstrin homology and FYVE domain containing 2, [RH, Score=221, Expect=8e-72]} {Mouse: ENSMUSG00000049969, Plekhf2, pleckstrin homology domain containing, family F (with FYVE domain) member 2, [RH, Score=220, Expect=1e-71]} {Dmel: FBgn0025381, rush, rush hour, [RH, Score=209, Expect=1e-66]} {Celegans: WBGene00014019, ZK632.12, [RH, Score=206, Expect=4e-66]} {Smed: dd_Smed_v6_6176_1_1, dd_Smed_v6_6176_1_1, [RH, Score=189, Expect=2e-59]} {RNA1509_20229, RNA1509_35179, RNA1509_35502, RNA1509_54131, RNA1509_56862} {RNA1310_12913.1, RNA1509_20229, RNA1509_35179, RNA1509_35502, RNA1509_54131, RNA1509_56862} {RNA1509_20229, RNA1509_35179, RNA1509_35502, RNA1509_54131, RNA1509_56862, RNA815_8773}
7. MligTC455_18881 656 13.66 Mlig455_048994, Mlig455_049011

Neo: -

Age: -

 0.969 - - - - - 0.969

Mlig455_048994 {REF} {Length: 2919} {TRANSSPLICED} {Pfam: TIR domain [PF13676.8, score=93.7]; TIR domain [PF01582.22, score=46.8]} {Smed: dd_Smed_v6_9201_0_1, dd_Smed_v6_9201_0_1, [RH, Score=305, Expect=4e-91]} {RNA1509_17089} {RNA1310_6087.1} {RNA815_12761}

Mlig455_049011 {REF} {Length: 3329} {Pfam: TIR domain [PF13676.8, score=81.0]; TIR domain [PF01582.22, score=46.3]} {Smed: dd_Smed_v6_9201_0_1, dd_Smed_v6_9201_0_1, [RH, Score=310, Expect=8e-93]} {RNA1509_17089} {RNA1310_6087.1} {RNA815_12761}
8. MligTC455_32411 976 20.33 Mlig455_010445

Neo: -

Age: -

Region-specific R4: 2.668

Region-enriched R4: 1.594/0.00012

 SCUBE3 0.963 - - - - 0.963 - Mlig455_010445 {REF} {Length: 1811} {Pfam: Tyrosine-protein kinase ephrin type A/B receptor-like [PF07699.15, score=96.7]; Nine Cysteines Domain of family 3 GPCR [PF07562.16, score=50.7]} {Human: ENSG00000146197, SCUBE3, signal peptide, CUB domain and EGF like domain containing 3, [Score=63.5, Expect=2e-10]} {Mouse: ENSMUSG00000109446, Gm9195, predicted gene 9195, [Score=62.0, Expect=6e-10]; ENSMUSG00000038677, Scube3, signal peptide, CUB domain, EGF-like 3, [Score=61.6, Expect=8e-10]} {Dmel: FBgn0031879, uif, uninflatable, [Score=51.2, Expect=1e-06]} {Celegans: WBGene00010134, F55H12.3, [Score=52.8, Expect=3e-07]} {Smed: dd_Smed_v6_3432_0_1, dd_Smed_v6_3432_0_1, [RH, Score=158, Expect=1e-45]} {RNA1509_11026} {RNA1310_19067, RNA1509_11026} {RNA1509_11026, RNA815_15156}
9. MligTC455_07096 203 4.24 Mlig455_071172, Mlig455_071174

Neo: Int S/G2/M

Age: -

Region-enriched R5: 2.415/0.00748
Region-enriched R4: 2.286/0.01746

 0.962 - - - - 0.962 -

Mlig455_071172 {REF} {Length: 1252} {NoTransDecoderORF} {RNA1310_32176}

Mlig455_071174 {REF} {Length: 313} {NoTransDecoderORF} {RNA1310_32176}
10. MligTC455_44644 368 7.66 Mlig455_012549

Neo: -

Age: -

 0.955 - - - - - 0.955 Mlig455_012549 {REF} {Length: 1215} {NoTransDecoderORF} {RNA1509_48971} {RNA1310_7732} {RNA815_2578}

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