Data search
Results for MligTC455_47579
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_47579 | 133 | 2.76 | Mlig455_041880 | Neo: - Age: Down-Up-Down |
Mlig455_041880 {REF} {Length: 2196} {TRANSSPLICED} {RNA1509_11215, RNA1509_36784} {RNA1310_37626, RNA1509_11215} {RNA1509_11215, RNA815_15592} |
Cumulative graph for MligTC455_47579
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.29 | 2.285 | 1.00000 | 1.00000 | |
| RegionR2 | -0.429 | 2.285 | 0.76054 | 1.00000 | |
| RegionR3 | 1.22 | 2.285 | 0.31720 | 0.85582 | |
| RegionR4 | 3.551 | 2.285 | 0.03436 | 0.14953 | |
| RegionR5 | 0.958 | 2.285 | 0.49040 | 0.85366 | |
| RegionR6 | 1.745 | 2.285 | 0.16784 | 0.72402 | |
| RegionR7 | -2.676 | 2.285 | 1.00000 | 1.00000 | |
| RegionR8 | -2.079 | 2.285 | 1.00000 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.002 | 2.285 | 1.00000 | 1.00000 | |
| RegenerationR2 | 1.474 | 2.285 | 0.02414 | 0.25590 | |
| RegenerationR3 | 1.147 | 2.285 | 0.20445 | 0.63921 | |
| RegenerationR4 | 1.727 | 2.285 | 0.05425 | 0.37446 | |
| RegenerationR5 | 3.028 | 2.285 | 0.00062 | 0.04118 | |
| RegenerationR6 | 1.072 | 2.285 | 0.22732 | 0.57263 | |
| RegenerationBL | 4.069 | 2.285 | 0.00750 | 0.08445 | |
| RegenerationTP | 4.032 | 2.285 | 0.09413 | 0.48119 |
Genes with expression patterns similar to MligTC455_47579
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_47579 | 133 | 2.76 | Mlig455_041880 | Neo: - Age: Down-Up-Down |
5 | 1.000 | - | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_041880 {REF} {Length: 2196} {TRANSSPLICED} {RNA1509_11215, RNA1509_36784} {RNA1310_37626, RNA1509_11215} {RNA1509_11215, RNA815_15592} | |
| 2. | MligTC455_30072 | 119 | 2.48 | Mlig455_004854 | Neo: - Age: - |
TOP3A | 1.707 | - | - | - | 0.749 | - | 0.958 | Mlig455_004854 {REF} {Length: 4031} {TRANSSPLICED} {Pfam: DNA topoisomerase [PF01131.22, score=365.2]; GRF zinc finger [PF06839.14, score=114.9]; Toprim domain [PF01751.24, score=65.1]; Topoisomerase DNA binding C4 zinc finger [PF01396.21, score=37.6]} {Human: ENSG00000177302, TOP3A, DNA topoisomerase III alpha, [RH, Score=942, Expect=0.0]; ENSG00000284238, TOP3A, DNA topoisomerase III alpha, [RH, Score=942, Expect=0.0]} {Mouse: ENSMUSG00000002814, Top3a, topoisomerase (DNA) III alpha, [Score=945, Expect=0.0]} {Dmel: FBgn0040268, Top3alpha, Topoisomerase 3alpha, [RH, Score=777, Expect=0.0]} {Celegans: WBGene00006596, top-3, DNA topoisomerase 3, [RH, Score=635, Expect=0.0]} {Smed: dd_Smed_v6_20479_0_1, dd_Smed_v6_20479_0_1, [RH, Score=640, Expect=0.0]} {RNA1509_11005, RNA1509_45373} {RNA1310_4689.1, RNA1509_45373} {RNA1509_45373, RNA815_5623} |
| 3. | MligTC455_50094 | 148 | 3.09 | Mlig455_042020 | Neo: Irradiation Age: - Region-enriched R4: 2.698/0.01391 |
RNF216 | 0.978 | - | - | - | - | - | 0.978 | Mlig455_042020 {REF} {Length: 2245} {TRANSSPLICED} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=27.5]; FtsX extracellular domain [PF18075.3, score=19.7]} {Human: ENSG00000011275, RNF216, ring finger protein 216, [Score=174, Expect=5e-45]} {Mouse: ENSMUSG00000045078, Rnf216, ring finger protein 216, [Score=171, Expect=2e-44]} {Dmel: FBgn0025186, ari-2, ariadne 2, [Score=60.1, Expect=4e-09]} {Celegans: WBGene00016157, C27A12.7, [Score=67.0, Expect=2e-11]} {Smed: dd_Smed_v6_4224_0_1, dd_Smed_v6_4224_0_1, [Score=60.8, Expect=1e-09]} {RNA1509_15865} {RNA1310_11127} {RNA815_4010.1} |
| 4. | MligTC455_45646 | 1265 | 26.36 | Mlig455_057121, Mlig455_069297 | Neo: - Age: - Region-enriched R4: 1.525/0.00499 |
PLEKHF2 | 0.966 | - | - | - | - | - | 0.966 | Mlig455_057121 {REF} {Length: 2756} {TRANSSPLICED} {Pfam: FYVE zinc finger [PF01363.23, score=71.7]; PH domain [PF00169.31, score=34.2]; PH domain [PF14593.8, score=21.3]} {Human: ENSG00000175895, PLEKHF2, pleckstrin homology and FYVE domain containing 2, [RH, Score=221, Expect=8e-72]} {Mouse: ENSMUSG00000049969, Plekhf2, pleckstrin homology domain containing, family F (with FYVE domain) member 2, [RH, Score=220, Expect=1e-71]} {Dmel: FBgn0025381, rush, rush hour, [RH, Score=209, Expect=1e-66]} {Celegans: WBGene00014019, ZK632.12, [RH, Score=206, Expect=4e-66]} {Smed: dd_Smed_v6_6176_1_1, dd_Smed_v6_6176_1_1, [RH, Score=189, Expect=2e-59]} {RNA1509_20229} {RNA1310_12913.1} {RNA815_8773} Mlig455_069297 {REF} {Length: 2751} {TRANSSPLICED} {Pfam: FYVE zinc finger [PF01363.23, score=71.7]; PH domain [PF00169.31, score=34.2]; PH domain [PF14593.8, score=21.3]} {Human: ENSG00000175895, PLEKHF2, pleckstrin homology and FYVE domain containing 2, [RH, Score=221, Expect=8e-72]} {Mouse: ENSMUSG00000049969, Plekhf2, pleckstrin homology domain containing, family F (with FYVE domain) member 2, [RH, Score=220, Expect=1e-71]} {Dmel: FBgn0025381, rush, rush hour, [RH, Score=209, Expect=1e-66]} {Celegans: WBGene00014019, ZK632.12, [RH, Score=206, Expect=4e-66]} {Smed: dd_Smed_v6_6176_1_1, dd_Smed_v6_6176_1_1, [RH, Score=189, Expect=2e-59]} {RNA1509_20229, RNA1509_35179, RNA1509_35502, RNA1509_54131, RNA1509_56862} {RNA1310_12913.1, RNA1509_20229, RNA1509_35179, RNA1509_35502, RNA1509_54131, RNA1509_56862} {RNA1509_20229, RNA1509_35179, RNA1509_35502, RNA1509_54131, RNA1509_56862, RNA815_8773} |
| 5. | MligTC455_41422 | 158 | 3.3 | Mlig455_008530 | Neo: - Age: Up-Down-Up |
BBS4 | 0.961 | - | - | - | - | - | 0.961 | Mlig455_008530 {REF} {Length: 2865} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF07719.19, score=131.8]; Tetratricopeptide repeat [PF00515.30, score=117.7]; Tetratricopeptide repeat [PF13181.8, score=99.9]; TPR repeat [PF13414.8, score=73.7]; Tetratricopeptide repeat [PF14559.8, score=66.5]; Tetratricopeptide repeat [PF13371.8, score=62.3]; Tetratricopeptide repeat [PF13432.8, score=60.0]; Tetratricopeptide repeat [PF13428.8, score=59.6]; Tetratricopeptide repeat [PF13424.8, score=57.6]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=49.8]; Tetratricopeptide repeat [PF13176.8, score=46.5]; Tetratricopeptide repeat [PF13431.8, score=40.4]; Tetratricopeptide repeat [PF13174.8, score=39.9]; Tetratricopeptide repeat [PF14561.8, score=25.0]; Coatomer epsilon subunit [PF04733.16, score=22.6]; Tetratricopeptide repeat [PF13429.8, score=22.0]; Protein kinase G tetratricopeptide repeat [PF16918.7, score=21.4]; Bacterial type III secretion protein (HrpB1_HrpK) [PF09613.12, score=18.5]} {Human: ENSG00000140463, BBS4, Bardet-Biedl syndrome 4, [RH, Score=498, Expect=6e-172]} {Mouse: ENSMUSG00000025235, Bbs4, Bardet-Biedl syndrome 4 (human), [RH, Score=491, Expect=3e-169]} {Dmel: FBgn0033578, BBS4, Bardet-Biedl syndrome 4, [RH, Score=253, Expect=4e-77]} {Celegans: WBGene00043992, bbs-4, Bardet-Biedl syndrome 4 protein homolog, [RH, Score=206, Expect=5e-60]} {Smed: dd_Smed_v6_11370_0_1, dd_Smed_v6_11370_0_1, [RH, Score=445, Expect=6e-152]} {RNA1509_10669} {RNA1310_19623.1} {RNA815_1541.1} |
| 6. | MligTC455_29569 | 458 | 9.53 | Mlig455_034168, Mlig455_040379 | Neo: - |
TRAF3 | 0.956 | - | - | - | - | 0.956 | - | Mlig455_034168 {REF} {Length: 2313} {TRANSSPLICED} {Pfam: TRAF-type zinc finger [PF02176.20, score=30.0]} {Human: ENSG00000131323, TRAF3, TNF receptor associated factor 3, [RH, Score=259, Expect=8e-81]} {Mouse: ENSMUSG00000021277, Traf3, TNF receptor-associated factor 3, [Score=270, Expect=2e-84]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [Score=128, Expect=4e-32]} {Celegans: WBGene00006612, trf-1, TNF Receptor Associated Factor (TRAF) homolog; TRF-1, [Score=112, Expect=9e-27]} {Smed: dd_Smed_v6_3837_0_1, dd_Smed_v6_3837_0_1, [RH, Score=178, Expect=1e-50]} {RNA1509_37811} {RNA1310_11544} {RNA815_4083.1} Mlig455_040379 {REF} {Length: 3163} {Pfam: TRAF-type zinc finger [PF02176.20, score=38.0]; zinc finger of C3HC4-type, RING [PF15227.8, score=21.9]; zf-RING of BARD1-type protein [PF14835.8, score=18.8]} {Human: ENSG00000131323, TRAF3, TNF receptor associated factor 3, [RH, Score=303, Expect=2e-95]} {Mouse: ENSMUSG00000021277, Traf3, TNF receptor-associated factor 3, [RH, Score=301, Expect=4e-95]; ENSMUSG00000026637, Traf5, TNF receptor-associated factor 5, [RH, Score=293, Expect=5e-92]; ENSMUSG00000111385, Traf5, TNF receptor-associated factor 5, [RH, Score=293, Expect=5e-92]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [Score=122, Expect=1e-29]} {Celegans: WBGene00006612, trf-1, TNF Receptor Associated Factor (TRAF) homolog; TRF-1, [Score=101, Expect=7e-23]} {Smed: dd_Smed_v6_4392_0_1, dd_Smed_v6_4392_0_1, [RH, Score=185, Expect=4e-52]} {RNA1509_37811} {RNA1310_15068.1, RNA1509_37811} {RNA1509_37811, RNA815_4083.1} |
| 7. | MligTC455_33764 | 92 | 1.91 | Mlig455_017005 | Neo: - Age: - Region-enriched R4: 5.822/0.00159 |
PRDM1 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_017005 {REF} {Length: 1103} {TRANSSPLICED} {Pfam: Zinc-finger double domain [PF13465.8, score=55.9]; C2H2-type zinc finger [PF13894.8, score=33.5]; Zinc finger, C2H2 type [PF00096.28, score=24.3]; Zinc-finger of C2H2 type [PF12874.9, score=19.6]} {Human: ENSG00000057657, PRDM1, PR/SET domain 1, [Score=84.0, Expect=9e-19]; ENSG00000196812, ZSCAN16, zinc finger and SCAN domain containing 16, [Score=84.0, Expect=5e-19]; ENSG00000187626, ZKSCAN4, zinc finger with KRAB and SCAN domains 4, [Score=84.0, Expect=9e-19]; ENSG00000274349, ZNF658, zinc finger protein 658, [Score=82.4, Expect=4e-18]; ENSG00000147118, ZNF182, zinc finger protein 182, [Score=82.4, Expect=3e-18]; ENSG00000159917, ZNF235, zinc finger protein 235, [Score=82.4, Expect=4e-18]; ENSG00000183647, ZNF530, zinc finger protein 530, [Score=81.6, Expect=7e-18]; ENSG00000182318, ZSCAN22, zinc finger and SCAN domain containing 22, [Score=81.6, Expect=6e-18]; ENSG00000198315, ZKSCAN8, zinc finger with KRAB and SCAN domains 8, [Score=81.6, Expect=7e-18]; ENSG00000189298, ZKSCAN3, zinc finger with KRAB and SCAN domains 3, [Score=81.6, Expect=5e-18]; ENSG00000198538, ZNF28, zinc finger protein 28, [Score=80.1, Expect=2e-17]} {Mouse: ENSMUSG00000038151, Prdm1, PR domain containing 1, with ZNF domain, [Score=85.5, Expect=2e-19]; ENSMUSG00000054715, Zscan22, zinc finger and SCAN domain containing 22, [Score=85.5, Expect=2e-19]; ENSMUSG00000063108, Zfp26, zinc finger protein 26, [Score=83.2, Expect=1e-18]; ENSMUSG00000054737, Zfp182, zinc finger protein 182, [Score=82.4, Expect=2e-18]; ENSMUSG00000061898, Rbak, RB-associated KRAB zinc finger, [Score=82.0, Expect=4e-18]; ENSMUSG00000054931, Zkscan4, zinc finger with KRAB and SCAN domains 4, [Score=81.3, Expect=5e-18]} {Dmel: FBgn0051632, sens-2, senseless-2, [Score=75.9, Expect=3e-16]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [Score=76.3, Expect=1e-16]} {Smed: dd_Smed_v6_19859_0_1, dd_Smed_v6_19859_0_1, [Score=75.1, Expect=3e-16]} {RNA1509_46841} {RNA1310_39292, RNA1509_46841} {RNA1509_46841, RNA815_12489} |
| 8. | MligTC455_49224 | 228 | 4.75 | Mlig455_020671, Mlig455_048768 | Neo: - Age: - |
VPS41 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_020671 {REF} {Length: 3300} {TRANSSPLICED} {Pfam: Region in Clathrin and VPS [PF00637.22, score=59.8]; zinc-RING finger domain [PF14634.8, score=22.0]} {Human: ENSG00000006715, VPS41, VPS41, HOPS complex subunit, [RH, Score=464, Expect=5e-150]} {Mouse: ENSMUSG00000041236, Vps41, VPS41 HOPS complex subunit, [RH, Score=459, Expect=3e-148]} {Dmel: FBgn0002566, lt, light, [RH, Score=401, Expect=2e-126]} {Celegans: WBGene00017974, vps-41, Vacuolar protein sorting-associated protein 41 homolog, [RH, Score=303, Expect=2e-89]} {Smed: dd_Smed_v6_3481_0_1, dd_Smed_v6_3481_0_1, [RH, Score=390, Expect=7e-122]} {RNA1509_34132} {RNA1310_6719} {RNA815_4867} Mlig455_048768 {REF} {Length: 3692} {Pfam: Region in Clathrin and VPS [PF00637.22, score=59.8]; zinc-RING finger domain [PF14634.8, score=22.0]} {Human: ENSG00000006715, VPS41, VPS41, HOPS complex subunit, [RH, Score=464, Expect=5e-150]} {Mouse: ENSMUSG00000041236, Vps41, VPS41 HOPS complex subunit, [RH, Score=459, Expect=4e-148]} {Dmel: FBgn0002566, lt, light, [RH, Score=401, Expect=2e-126]} {Celegans: WBGene00017974, vps-41, Vacuolar protein sorting-associated protein 41 homolog, [RH, Score=302, Expect=5e-89]} {Smed: dd_Smed_v6_3481_0_1, dd_Smed_v6_3481_0_1, [RH, Score=389, Expect=2e-121]} {RNA1509_34132} {RNA1310_6719, RNA1509_34132} {RNA1509_34132, RNA815_4867} |
| 9. | MligTC455_39404 | 172 | 3.59 | Mlig455_039240, Mlig455_053901 | Neo: - Age: Down-Up-Down |
ASIC1 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_039240 {REF} {Length: 2885} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=208.9]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=61.2, Expect=4e-09]} {Mouse: ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=58.5, Expect=2e-08]} {Celegans: WBGene00003168, mec-4, Degenerin mec-4, [Score=64.3, Expect=2e-10]} {Smed: dd_Smed_v6_12878_0_1, dd_Smed_v6_12878_0_1, [Score=116, Expect=5e-27]} {RNA1509_33503} {RNA1310_10134} {RNA815_5943} Mlig455_053901 {REF} {Length: 3001} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=208.9]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=61.2, Expect=4e-09]} {Mouse: ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=58.5, Expect=2e-08]} {Celegans: WBGene00003168, mec-4, Degenerin mec-4, [Score=64.3, Expect=2e-10]} {Smed: dd_Smed_v6_12878_0_1, dd_Smed_v6_12878_0_1, [Score=116, Expect=5e-27]} {RNA1509_33503} {RNA1310_10134, RNA1509_33503} {RNA1509_33503, RNA815_5943} |