Data search


search
Exact
Search

Results for MligTC455_32253

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_32253 4695 97.82 Mlig455_028199

Neo: -

Age: Down-Up-Down

Region-enriched R4: 1.082/0.00093

VAMP1 Mlig455_028199 {REF} {Length: 1862} {TRANSSPLICED} {Pfam: Synaptobrevin [PF00957.23, score=96.7]; Rifin [PF02009.18, score=20.7]} {Human: ENSG00000139190, VAMP1, vesicle associated membrane protein 1, [Score=66.2, Expect=2e-14]; ENSG00000263620, AC129492.3, novel protein, [Score=65.9, Expect=2e-14]; ENSG00000220205, VAMP2, vesicle associated membrane protein 2, [Score=65.5, Expect=3e-14]; ENSG00000118640, VAMP8, vesicle associated membrane protein 8, [Score=63.9, Expect=8e-14]} {Mouse: ENSMUSG00000030337, Vamp1, vesicle-associated membrane protein 1, [Score=67.4, Expect=4e-15]; ENSMUSG00000020894, Vamp2, vesicle-associated membrane protein 2, [Score=67.0, Expect=1e-14]} {Dmel: FBgn0003660, Syb, Synaptobrevin, [Score=82.8, Expect=4e-21]} {Celegans: WBGene00004898, snb-2, SyNaptoBrevin related, [Score=75.1, Expect=2e-18]} {Smed: dd_Smed_v6_9710_0_1, dd_Smed_v6_9710_0_1, [Score=74.7, Expect=6e-18]} {RNA1509_4781} {RNA1310_6156.1} {RNA815_7965}

Cumulative graph for MligTC455_32253

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.513 6.712 0.23240 0.87519
RegionR2 -1.215 6.712 0.00006 0.00261
RegionR3 0.404 6.712 0.08936 0.52820
RegionR4 1.082 6.712 0.00005 0.00093
RegionR5 0.772 6.712 0.00063 0.00709
RegionR6 0.268 6.712 0.27051 0.85977
RegionR7 -0.766 6.712 0.00794 0.14877
RegionR8 -1.058 6.712 0.00200 0.07496

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.813 6.712 0.00350 0.29963
RegenerationR2 -0.081 6.712 0.79217 0.98734
RegenerationR3 -0.554 6.712 0.07347 0.45319
RegenerationR4 -0.509 6.712 0.10213 0.49441
RegenerationR5 -0.404 6.712 0.17525 0.60452
RegenerationR6 -0.271 6.712 0.37434 0.71652
RegenerationBL -0.857 6.712 0.00986 0.09999
RegenerationTP -0.117 6.712 0.73230 1.00000


Genes with expression patterns similar to MligTC455_32253

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_32253 4695 97.82 Mlig455_028199

Neo: -

Age: Down-Up-Down

Region-enriched R4: 1.082/0.00093

VAMP1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_028199 {REF} {Length: 1862} {TRANSSPLICED} {Pfam: Synaptobrevin [PF00957.23, score=96.7]; Rifin [PF02009.18, score=20.7]} {Human: ENSG00000139190, VAMP1, vesicle associated membrane protein 1, [Score=66.2, Expect=2e-14]; ENSG00000263620, AC129492.3, novel protein, [Score=65.9, Expect=2e-14]; ENSG00000220205, VAMP2, vesicle associated membrane protein 2, [Score=65.5, Expect=3e-14]; ENSG00000118640, VAMP8, vesicle associated membrane protein 8, [Score=63.9, Expect=8e-14]} {Mouse: ENSMUSG00000030337, Vamp1, vesicle-associated membrane protein 1, [Score=67.4, Expect=4e-15]; ENSMUSG00000020894, Vamp2, vesicle-associated membrane protein 2, [Score=67.0, Expect=1e-14]} {Dmel: FBgn0003660, Syb, Synaptobrevin, [Score=82.8, Expect=4e-21]} {Celegans: WBGene00004898, snb-2, SyNaptoBrevin related, [Score=75.1, Expect=2e-18]} {Smed: dd_Smed_v6_9710_0_1, dd_Smed_v6_9710_0_1, [Score=74.7, Expect=6e-18]} {RNA1509_4781} {RNA1310_6156.1} {RNA815_7965}
2. MligTC455_32254 4780 99.59 Mlig455_063564

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.209

Region-enriched R4: 1.055/0.00127

VAMP1 5.982 0.991 0.999 0.998 1.000 1.000 0.994 Mlig455_063564 {REF} {Length: 1900} {TRANSSPLICED} {Pfam: Synaptobrevin [PF00957.23, score=96.7]; Rifin [PF02009.18, score=20.7]} {Human: ENSG00000139190, VAMP1, vesicle associated membrane protein 1, [Score=66.2, Expect=2e-14]; ENSG00000263620, AC129492.3, novel protein, [Score=65.9, Expect=2e-14]; ENSG00000220205, VAMP2, vesicle associated membrane protein 2, [Score=65.5, Expect=3e-14]; ENSG00000118640, VAMP8, vesicle associated membrane protein 8, [Score=63.9, Expect=8e-14]} {Mouse: ENSMUSG00000030337, Vamp1, vesicle-associated membrane protein 1, [Score=67.4, Expect=4e-15]; ENSMUSG00000020894, Vamp2, vesicle-associated membrane protein 2, [Score=67.0, Expect=1e-14]} {Dmel: FBgn0003660, Syb, Synaptobrevin, [Score=82.8, Expect=4e-21]} {Celegans: WBGene00004898, snb-2, SyNaptoBrevin related, [Score=75.1, Expect=2e-18]} {Smed: dd_Smed_v6_9710_0_1, dd_Smed_v6_9710_0_1, [Score=74.7, Expect=6e-18]} {RNA1509_1399, RNA1509_14159, RNA1509_14803, RNA1509_4160, RNA1509_4781} {RNA1310_6156.1, RNA1509_1399, RNA1509_14159, RNA1509_14803, RNA1509_4160, RNA1509_4781} {RNA1509_1399, RNA1509_14159, RNA1509_14803, RNA1509_4160, RNA1509_4781, RNA815_7965}
3. MligTC455_46268 5028 104.74 Mlig455_028687

Neo: -

Age: -

ACSL4 2.534 0.757 - - 0.963 0.814 - Mlig455_028687 {REF} {Length: 3784} {TRANSSPLICED} {Pfam: AMP-binding enzyme [PF00501.30, score=333.9]; AMP-binding enzyme C-terminal domain [PF13193.8, score=22.1]} {Human: ENSG00000068366, ACSL4, acyl-CoA synthetase long chain family member 4, [RH, Score=737, Expect=0.0]; ENSG00000123983, ACSL3, acyl-CoA synthetase long chain family member 3, [RH, Score=709, Expect=0.0]} {Mouse: ENSMUSG00000031278, Acsl4, acyl-CoA synthetase long-chain family member 4, [RH, Score=743, Expect=0.0]; ENSMUSG00000032883, Acsl3, acyl-CoA synthetase long-chain family member 3, [RH, Score=712, Expect=0.0]} {Dmel: FBgn0263120, Acsl, Acyl-CoA synthetase long-chain, [RH, Score=654, Expect=0.0]} {Celegans: WBGene00016716, acs-17, Fatty Acid CoA Synthetase family, [RH, Score=620, Expect=0.0]} {Smed: dd_Smed_v6_3021_0_1, dd_Smed_v6_3021_0_1, [RH, Score=746, Expect=0.0]} {RNA1509_1555, RNA1509_21583, RNA1509_27131, RNA1509_27311, RNA1509_27684, RNA1509_33636, RNA1509_34797} {RNA1310_8471.1, RNA1509_1555, RNA1509_21583, RNA1509_27131, RNA1509_27311, RNA1509_27684, RNA1509_33636, RNA1509_34797} {RNA1509_1555, RNA1509_21583, RNA1509_27131, RNA1509_27311, RNA1509_27684, RNA1509_33636, RNA1509_34797, RNA815_2478}
4. MligTC455_46269 5052 105.25 Mlig455_028710

Neo: -

Age: logFC(26M/2M)=0.191

ACSL4 2.532 0.755 - - 0.953 0.824 - Mlig455_028710 {REF} {Length: 3681} {TRANSSPLICED} {Pfam: AMP-binding enzyme [PF00501.30, score=333.6]; AMP-binding enzyme C-terminal domain [PF13193.8, score=22.3]} {Human: ENSG00000068366, ACSL4, acyl-CoA synthetase long chain family member 4, [RH, Score=738, Expect=0.0]; ENSG00000123983, ACSL3, acyl-CoA synthetase long chain family member 3, [RH, Score=711, Expect=0.0]} {Mouse: ENSMUSG00000031278, Acsl4, acyl-CoA synthetase long-chain family member 4, [RH, Score=744, Expect=0.0]; ENSMUSG00000032883, Acsl3, acyl-CoA synthetase long-chain family member 3, [RH, Score=712, Expect=0.0]} {Dmel: FBgn0263120, Acsl, Acyl-CoA synthetase long-chain, [RH, Score=654, Expect=0.0]} {Celegans: WBGene00016716, acs-17, Fatty Acid CoA Synthetase family, [RH, Score=621, Expect=0.0]} {Smed: dd_Smed_v6_3021_0_1, dd_Smed_v6_3021_0_1, [RH, Score=746, Expect=0.0]} {RNA1509_16669, RNA1509_34797} {RNA1310_8471.1, RNA1509_16669} {RNA1509_16669, RNA815_2478}
5. MligTC455_36954 2263 47.15 Mlig455_041278

Neo: -

Age: logFC(26M/2M)=-0.220

Region-enriched R3: 1.232/0.02876

MARC1 1.809 - - - 0.968 - 0.841 Mlig455_041278 {REF} {Length: 2109} {Pfam: MOSC N-terminal beta barrel domain [PF03476.18, score=77.0]; MOSC domain [PF03473.19, score=67.6]} {Human: ENSG00000186205, MARC1, mitochondrial amidoxime reducing component 1, [RH, Score=114, Expect=1e-28]} {Mouse: ENSMUSG00000026621, Marc1, mitochondrial amidoxime reducing component 1, [RH, Score=118, Expect=3e-30]; ENSMUSG00000073481, Marc2, mitochondrial amidoxime reducing component 2, [RH, Score=116, Expect=2e-29]} {Dmel: FBgn0033451, CG1665, [RH, Score=81.6, Expect=3e-17]} {Celegans: WBGene00018758, F53E10.1, [RH, Score=98.2, Expect=4e-23]} {Smed: dd_Smed_v6_7493_0_1, dd_Smed_v6_7493_0_1, [Score=63.2, Expect=3e-11]} {RNA1509_12139, RNA1509_16934, RNA1509_25829, RNA1509_27068, RNA1509_4542} {RNA1310_14706.1, RNA1509_12139, RNA1509_16934, RNA1509_25829, RNA1509_27068, RNA1509_4542} {RNA1509_12139, RNA1509_16934, RNA1509_25829, RNA1509_27068, RNA1509_4542, RNA815_10847}
6. MligTC455_37896 4590 95.62 Mlig455_048970

Neo: -

Age: logFC(26M/2M)=0.339

Region-enriched R4: 1.540/0.00001

1.756 0.802 - - 0.954 - - Mlig455_048970 {REF} {Length: 1062} {Smed: dd_Smed_v6_951_0_1, dd_Smed_v6_951_0_1, [RH, Score=59.7, Expect=5e-13]} {RNA1509_1589} {RNA1310_12812.1} {RNA815_14113}
7. MligTC455_37421 2101 43.77 Mlig455_042713, Mlig455_042814

Neo: -

Age: -

Region-enriched R5: 1.953/0.00000

1.751 - - 0.794 0.957 - -

Mlig455_042713 {REF} {Length: 1861} {Pfam: Aminotransferase class-V [PF00266.21, score=59.9]; Aminotransferase class I and II [PF00155.23, score=31.5]} {Smed: dd_Smed_v6_6547_0_1, dd_Smed_v6_6547_0_1, [RH, Score=218, Expect=7e-67]} {RNA1509_29088} {RNA1310_17454, RNA1509_29088} {RNA1509_29088, RNA815_8720}

Mlig455_042814 {REF} {Length: 1562} {Pfam: Aminotransferase class-V [PF00266.21, score=59.8]; Aminotransferase class I and II [PF00155.23, score=32.4]} {Dmel: FBgn0032393, CG12264, [Score=48.1, Expect=9e-06]} {Smed: dd_Smed_v6_6547_0_1, dd_Smed_v6_6547_0_1, [RH, Score=203, Expect=2e-61]} {RNA1509_19162, RNA1509_53034} {RNA1310_18376, RNA1509_19162, RNA1509_53034} {RNA1509_19162, RNA1509_53034, RNA815_8720}
8. MligTC455_28583 1530 31.88 Mlig455_069282

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.324

FKBP8 1.694 - - - 0.954 0.740 - Mlig455_069282 {REF} {Length: 2937} {TRANSSPLICED} {Pfam: FKBP-type peptidyl-prolyl cis-trans isomerase [PF00254.30, score=36.8]; Tetratricopeptide repeat [PF00515.30, score=32.4]; Tetratricopeptide repeat [PF07719.19, score=26.5]; Tetratricopeptide repeat [PF13181.8, score=19.3]} {Human: ENSG00000105701, FKBP8, FK506 binding protein 8, [Score=143, Expect=2e-36]} {Mouse: ENSMUSG00000019428, Fkbp8, FK506 binding protein 8, [Score=139, Expect=3e-35]} {Dmel: FBgn0034368, CG5482, [RH, Score=182, Expect=8e-51]} {Celegans: WBGene00001431, fkb-6, Peptidylprolyl isomerase, [Score=67.0, Expect=2e-11]} {Smed: dd_Smed_v6_1474_0_1, dd_Smed_v6_1474_0_1, [Score=159, Expect=1e-41]} {RNA1509_26580} {RNA1310_10924.2} {RNA815_2056.1}
9. MligTC455_30099 1989 41.44 Mlig455_013060

Neo: -

Age: -

0.975 - - - 0.975 - - Mlig455_013060 {REF} {Length: 4580} {Pfam: IQ calmodulin-binding motif [PF00612.29, score=40.2]} {Dmel: FBgn0030541, CG11584, [Score=57.4, Expect=6e-08]} {RNA1509_37972} {RNA1310_27776.1} {RNA815_13510}
10. MligTC455_32578 1609 33.52 Mlig455_003354

Neo: -

Age: Down-Up-Up

Region-enriched R5: 1.031/0.00384

FAH 0.962 - - - 0.962 - - Mlig455_003354 {REF} {Length: 2496} {TRANSSPLICED} {Pfam: Fumarylacetoacetate (FAA) hydrolase family [PF01557.20, score=171.5]; Fumarylacetoacetase N-terminal [PF09298.13, score=116.1]} {Human: ENSG00000103876, FAH, fumarylacetoacetate hydrolase, [RH, Score=622, Expect=0.0]} {Mouse: ENSMUSG00000030630, Fah, fumarylacetoacetate hydrolase, [RH, Score=624, Expect=0.0]} {Dmel: FBgn0016013, Faa, Fumarylacetoacetase, [RH, Score=525, Expect=0.0]} {Celegans: WBGene00019620, fah-1, FumarylAcetoacetate Hydrolase, [RH, Score=566, Expect=0.0]} {Smed: dd_Smed_v6_916_0_2, dd_Smed_v6_916_0_2, [RH, Score=549, Expect=0.0]} {RNA1509_7676} {RNA1310_6042} {RNA815_4884.1}
11. MligTC455_27994 6780 141.24 Mlig455_046529, Mlig455_046656

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.627

Region-enriched R5: 1.394/0.00007
Region-enriched R4: 1.074/0.02553

PPIA 0.953 - - - 0.953 - -

Mlig455_046529 {REF} {Length: 1080} {TRANSSPLICED} {Pfam: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD [PF00160.23, score=294.7]} {Human: ENSG00000196262, PPIA, peptidylprolyl isomerase A, [RH, Score=232, Expect=2e-76]} {Mouse: ENSMUSG00000071866, Ppia, peptidylprolyl isomerase A, [RH, Score=229, Expect=2e-75]} {Dmel: FBgn0004432, Cyp1, Cyclophilin 1, [Score=226, Expect=2e-73]} {Celegans: WBGene00000883, cyn-7, Peptidyl-prolyl cis-trans isomerase 7, [RH, Score=251, Expect=3e-84]} {Smed: dd_Smed_v6_457_0_1, dd_Smed_v6_457_0_1, [RH, Score=237, Expect=4e-79]} {RNA1509_4222} {RNA1310_55233} {RNA815_27193}

Mlig455_046656 {REF} {Length: 1071} {TRANSSPLICED} {Pfam: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD [PF00160.23, score=268.9]} {Human: ENSG00000196262, PPIA, peptidylprolyl isomerase A, [RH, Score=235, Expect=9e-78]} {Mouse: ENSMUSG00000071866, Ppia, peptidylprolyl isomerase A, [RH, Score=234, Expect=1e-77]} {Dmel: FBgn0004432, Cyp1, Cyclophilin 1, [Score=229, Expect=8e-75]} {Celegans: WBGene00000879, cyn-3, Peptidyl-prolyl cis-trans isomerase 3, [RH, Score=251, Expect=3e-84]} {Smed: dd_Smed_v6_457_0_1, dd_Smed_v6_457_0_1, [RH, Score=241, Expect=1e-80]} {RNA1509_4222} {RNA1310_55233} {RNA815_27193}
12. MligTC455_34701 5732 119.42 Mlig455_044421, Mlig455_044456, Mlig455_046748

Neo: -

Age: -

ABAT 0.953 - - - 0.953 - -

Mlig455_044421 {REF} {Length: 2235} {Pfam: Aminotransferase class-III [PF00202.23, score=330.6]} {Human: ENSG00000183044, ABAT, 4-aminobutyrate aminotransferase, [RH, Score=497, Expect=5e-173]} {Mouse: ENSMUSG00000057880, Abat, 4-aminobutyrate aminotransferase, [RH, Score=491, Expect=7e-171]} {Dmel: FBgn0036927, Gabat, gamma-aminobutyric acid transaminase, [RH, Score=530, Expect=0.0]} {Celegans: WBGene00001794, gta-1, Probable 4-aminobutyrate aminotransferase, mitochondrial, [RH, Score=461, Expect=2e-159]} {Smed: dd_Smed_v6_4367_0_1, dd_Smed_v6_4367_0_1, [RH, Score=531, Expect=0.0]} {RNA1509_15533, RNA1509_4088, RNA1509_40896} {RNA1310_12178, RNA1509_4088, RNA1509_40896} {RNA1509_4088, RNA1509_40896, RNA815_4296}

Mlig455_044456 {REF} {Length: 2252} {Pfam: Aminotransferase class-III [PF00202.23, score=332.7]} {Human: ENSG00000183044, ABAT, 4-aminobutyrate aminotransferase, [RH, Score=498, Expect=5e-173]} {Mouse: ENSMUSG00000057880, Abat, 4-aminobutyrate aminotransferase, [RH, Score=491, Expect=7e-171]} {Dmel: FBgn0036927, Gabat, gamma-aminobutyric acid transaminase, [RH, Score=532, Expect=0.0]} {Celegans: WBGene00001794, gta-1, Probable 4-aminobutyrate aminotransferase, mitochondrial, [RH, Score=461, Expect=1e-159]} {Smed: dd_Smed_v6_4367_0_1, dd_Smed_v6_4367_0_1, [RH, Score=529, Expect=0.0]} {RNA1509_39024, RNA1509_58685} {RNA1310_12178, RNA1509_39024, RNA1509_58685} {RNA1509_39024, RNA1509_58685, RNA815_4296}

Mlig455_046748 {REF} {Length: 2206} {Pfam: Aminotransferase class-III [PF00202.23, score=248.5]} {Human: ENSG00000183044, ABAT, 4-aminobutyrate aminotransferase, [Score=398, Expect=9e-136]} {Mouse: ENSMUSG00000057880, Abat, 4-aminobutyrate aminotransferase, [Score=397, Expect=2e-135]} {Dmel: FBgn0036927, Gabat, gamma-aminobutyric acid transaminase, [Score=426, Expect=5e-147]} {Celegans: WBGene00001794, gta-1, Probable 4-aminobutyrate aminotransferase, mitochondrial, [Score=389, Expect=5e-133]} {Smed: dd_Smed_v6_4367_0_1, dd_Smed_v6_4367_0_1, [Score=431, Expect=1e-149]} {RNA1509_15533, RNA1509_20161, RNA1509_39024} {RNA1310_12178, RNA1509_15533, RNA1509_20161} {RNA1509_15533, RNA1509_20161, RNA815_4296}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA