TomoSeq data search

Data search

Results for MligTC455_30538

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_30538

1019

21.24

Mlig455_016650, Mlig455_016715

Neo: -

Age: logFC(26M/2M)=-0.348

TTC6

Mlig455_016650 {REF} {Length: 6488} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF00515.30, score=271.0]; Tetratricopeptide repeat [PF07719.19, score=229.3]; TPR repeat [PF13414.8, score=155.2]; Tetratricopeptide repeat [PF13432.8, score=146.1]; Tetratricopeptide repeat [PF13371.8, score=127.6]; Tetratricopeptide repeat [PF13181.8, score=125.1]; Tetratricopeptide repeat [PF13431.8, score=119.1]; Tetratricopeptide repeat [PF13424.8, score=96.5]; Tetratricopeptide repeat [PF13428.8, score=59.5]; Tetratricopeptide repeat [PF14559.8, score=59.5]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=56.3]; Tetratricopeptide repeat [PF13176.8, score=46.2]; Tetratricopeptide repeat [PF13174.8, score=36.1]; Protein prenyltransferase alpha subunit repeat [PF01239.24, score=21.5]} {Human: ENSG00000139865, TTC6, tetratricopeptide repeat domain 6, [RH, Score=761, Expect=0.0]} {Mouse: ENSMUSG00000046782, Ttc6, tetratricopeptide repeat domain 6, [RH, Score=800, Expect=0.0]} {Dmel: FBgn0261403, sxc, super sex combs, [Score=108, Expect=4e-23]} {Celegans: WBGene00003858, ogt-1, UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase, [Score=101, Expect=5e-21]} {Smed: dd_Smed_v6_11462_0_1, dd_Smed_v6_11462_0_1, [RH, Score=1009, Expect=0.0]} {RNA1509_3314} {RNA1310_528.1} {RNA815_2163}

Mlig455_016715 {REF} {Length: 6514} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF00515.30, score=266.3]; Tetratricopeptide repeat [PF07719.19, score=228.6]; TPR repeat [PF13414.8, score=152.7]; Tetratricopeptide repeat [PF13432.8, score=142.7]; Tetratricopeptide repeat [PF13371.8, score=128.6]; Tetratricopeptide repeat [PF13181.8, score=125.3]; Tetratricopeptide repeat [PF13431.8, score=116.3]; Tetratricopeptide repeat [PF13424.8, score=97.8]; Tetratricopeptide repeat [PF14559.8, score=59.5]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=55.2]; Tetratricopeptide repeat [PF13428.8, score=53.7]; Tetratricopeptide repeat [PF13176.8, score=41.9]; Tetratricopeptide repeat [PF13174.8, score=36.6]; Protein prenyltransferase alpha subunit repeat [PF01239.24, score=21.0]} {Human: ENSG00000139865, TTC6, tetratricopeptide repeat domain 6, [RH, Score=757, Expect=0.0]} {Mouse: ENSMUSG00000046782, Ttc6, tetratricopeptide repeat domain 6, [RH, Score=796, Expect=0.0]} {Dmel: FBgn0261403, sxc, super sex combs, [Score=107, Expect=1e-22]} {Celegans: WBGene00003858, ogt-1, UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase, [Score=100, Expect=8e-21]} {Smed: dd_Smed_v6_11462_0_1, dd_Smed_v6_11462_0_1, [RH, Score=1001, Expect=0.0]} {RNA1509_3314} {RNA1310_528.1, RNA1509_3314} {RNA1509_3314, RNA815_2163}

Cumulative graph for MligTC455_30538

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.787	4.726	0.23231	0.87519
RegionR2	1.256	4.726	0.01761	0.14159
RegionR3	0.234	4.726	0.61216	1.00000
RegionR4	0.26	4.726	0.61441	0.92524
RegionR5	-0.216	4.726	0.64254	0.99498
RegionR6	-0.331	4.726	0.51706	1.00000
RegionR7	0.581	4.726	0.27957	0.91231
RegionR8	0.002	4.726	0.99519	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-5.926	4.726	0.27407	0.97586
RegenerationR2	0.513	4.726	0.23795	0.68599
RegenerationR3	0.986	4.726	0.04628	0.37514
RegenerationR4	0.37	4.726	0.46473	0.84997
RegenerationR5	0.492	4.726	0.30909	0.73525
RegenerationR6	0.579	4.726	0.26823	0.61832
RegenerationBL	0.808	4.726	0.12750	0.42467
RegenerationTP	0.043	4.726	0.94354	1.00000

Genes with expression patterns similar to MligTC455_30538

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_30538	1019	21.24	Mlig455_016650, Mlig455_016715	Neo: - Age: logFC(26M/2M)=-0.348	TTC6	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_016650 {REF} {Length: 6488} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF00515.30, score=271.0]; Tetratricopeptide repeat [PF07719.19, score=229.3]; TPR repeat [PF13414.8, score=155.2]; Tetratricopeptide repeat [PF13432.8, score=146.1]; Tetratricopeptide repeat [PF13371.8, score=127.6]; Tetratricopeptide repeat [PF13181.8, score=125.1]; Tetratricopeptide repeat [PF13431.8, score=119.1]; Tetratricopeptide repeat [PF13424.8, score=96.5]; Tetratricopeptide repeat [PF13428.8, score=59.5]; Tetratricopeptide repeat [PF14559.8, score=59.5]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=56.3]; Tetratricopeptide repeat [PF13176.8, score=46.2]; Tetratricopeptide repeat [PF13174.8, score=36.1]; Protein prenyltransferase alpha subunit repeat [PF01239.24, score=21.5]} {Human: ENSG00000139865, TTC6, tetratricopeptide repeat domain 6, [RH, Score=761, Expect=0.0]} {Mouse: ENSMUSG00000046782, Ttc6, tetratricopeptide repeat domain 6, [RH, Score=800, Expect=0.0]} {Dmel: FBgn0261403, sxc, super sex combs, [Score=108, Expect=4e-23]} {Celegans: WBGene00003858, ogt-1, UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase, [Score=101, Expect=5e-21]} {Smed: dd_Smed_v6_11462_0_1, dd_Smed_v6_11462_0_1, [RH, Score=1009, Expect=0.0]} {RNA1509_3314} {RNA1310_528.1} {RNA815_2163} Mlig455_016715 {REF} {Length: 6514} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF00515.30, score=266.3]; Tetratricopeptide repeat [PF07719.19, score=228.6]; TPR repeat [PF13414.8, score=152.7]; Tetratricopeptide repeat [PF13432.8, score=142.7]; Tetratricopeptide repeat [PF13371.8, score=128.6]; Tetratricopeptide repeat [PF13181.8, score=125.3]; Tetratricopeptide repeat [PF13431.8, score=116.3]; Tetratricopeptide repeat [PF13424.8, score=97.8]; Tetratricopeptide repeat [PF14559.8, score=59.5]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=55.2]; Tetratricopeptide repeat [PF13428.8, score=53.7]; Tetratricopeptide repeat [PF13176.8, score=41.9]; Tetratricopeptide repeat [PF13174.8, score=36.6]; Protein prenyltransferase alpha subunit repeat [PF01239.24, score=21.0]} {Human: ENSG00000139865, TTC6, tetratricopeptide repeat domain 6, [RH, Score=757, Expect=0.0]} {Mouse: ENSMUSG00000046782, Ttc6, tetratricopeptide repeat domain 6, [RH, Score=796, Expect=0.0]} {Dmel: FBgn0261403, sxc, super sex combs, [Score=107, Expect=1e-22]} {Celegans: WBGene00003858, ogt-1, UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase, [Score=100, Expect=8e-21]} {Smed: dd_Smed_v6_11462_0_1, dd_Smed_v6_11462_0_1, [RH, Score=1001, Expect=0.0]} {RNA1509_3314} {RNA1310_528.1, RNA1509_3314} {RNA1509_3314, RNA815_2163}
2.	MligTC455_30537	385	8.01	Mlig455_016651	Neo: - Age: -		5.789	0.973	0.873	0.994	0.987	0.975	0.987	Mlig455_016651 {REF} {Length: 1488} {NoTransDecoderORF} {RNA1509_3314} {RNA1310_528.1} {RNA815_15114}
3.	MligTC455_40940	493	10.27	Mlig455_003195	Neo: - Age: -		3.299	-	-	0.784	0.951	0.759	0.805	Mlig455_003195 {REF} {Length: 991} {TRANSSPLICED} {RNA1509_22190, RNA1509_44825} {RNA1310_28922.1, RNA1509_44825} {RNA1509_44825, RNA815_15505}
4.	MligTC455_13878	438	9.12	Mlig455_008227	Neo: - Age: logFC(26M/2M)=-0.747		3.259	-	-	0.837	0.755	0.710	0.957	Mlig455_008227 {REF} {Length: 1960} {Pfam: Sperm-tail PG-rich repeat [PF07004.14, score=22.0]} {Mouse: ENSMUSG00000036557, Stpg4, sperm tail PG rich repeat containing 4, [RH, Score=87.8, Expect=2e-20]} {RNA1509_18072, RNA1509_22020, RNA1509_41492} {RNA1310_16702.1, RNA1509_18072, RNA1509_22020} {RNA1509_18072, RNA1509_22020, RNA815_7507.1}
5.	MligTC455_52764	458	9.53	Mlig455_007605	Neo: - Age: logFC(26M/2M)=-0.490		2.757	-	-	-	0.901	0.969	0.887	Mlig455_007605 {REF} {Length: 1786} {Pfam: Zinc finger, ZZ type [PF00569.19, score=42.1]; PB1 domain [PF00564.26, score=29.5]} {RNA1509_14616} {RNA1310_27419.1, RNA1509_14616} {RNA1509_14616, RNA815_11811}
6.	MligTC455_49143	772	16.08	Mlig455_021704	Neo: - Age: - Region-enriched R2: 1.427/0.03420		2.634	-	-	-	0.955	0.863	0.816	Mlig455_021704 {REF} {Length: 2489} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4537) [PF15057.8, score=48.8]} {Smed: dd_Smed_v6_13233_0_2, dd_Smed_v6_13233_0_2, [Score=60.1, Expect=4e-09]} {RNA1509_11962} {RNA1310_8951.1, RNA1509_11962}
7.	MligTC455_53433	6029	125.61	Mlig455_004542, Mlig455_064733	Neo: - Age: Down-Up-Up	RSPH4A	2.55	-	-	-	0.748	0.953	0.849	Mlig455_004542 {REF} {Length: 1911} {TRANSSPLICED} {Pfam: Radial spokehead-like protein [PF04712.14, score=619.5]} {Human: ENSG00000111834, RSPH4A, radial spoke head component 4A, [RH, Score=442, Expect=4e-148]} {Mouse: ENSMUSG00000039552, Rsph4a, radial spoke head 4 homolog A (Chlamydomonas), [Score=448, Expect=2e-150]} {Dmel: FBgn0034957, CG3121, [Score=227, Expect=6e-66]} {Smed: dd_Smed_v6_5346_0_1, dd_Smed_v6_5346_0_1, [RH, Score=454, Expect=1e-155]} {RNA1509_6840} {RNA1310_12717.2} {RNA815_4800.1} Mlig455_064733 {REF} {Length: 1911} {TRANSSPLICED} {Pfam: Radial spokehead-like protein [PF04712.14, score=619.5]} {Human: ENSG00000111834, RSPH4A, radial spoke head component 4A, [RH, Score=442, Expect=4e-148]} {Mouse: ENSMUSG00000039552, Rsph4a, radial spoke head 4 homolog A (Chlamydomonas), [Score=448, Expect=2e-150]} {Dmel: FBgn0034957, CG3121, [Score=227, Expect=6e-66]} {Smed: dd_Smed_v6_5346_0_1, dd_Smed_v6_5346_0_1, [RH, Score=454, Expect=1e-155]} {RNA1509_6840} {RNA1310_12717.2} {RNA815_4800.1}
8.	MligTC455_17333	251	5.22	Mlig455_018094	Neo: - Age: logFC(26M/2M)=-0.324	CFAP77	1.766	-	-	-	-	0.810	0.956	Mlig455_018094 {REF} {Length: 1669} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4483) [PF14825.8, score=38.0]} {Human: ENSG00000188523, CFAP77, cilia and flagella associated protein 77, [Score=62.4, Expect=1e-10]} {Smed: dd_Smed_v6_5179_0_1, dd_Smed_v6_5179_0_1, [Score=64.3, Expect=5e-12]} {RNA1509_11420} {RNA1310_11821} {RNA815_16183}
9.	MligTC455_47696	1742	36.29	Mlig455_050774	Neo: - Age: -	SRRM1	1.73	-	-	-	0.753	0.977	-	Mlig455_050774 {REF} {Length: 3623} {Pfam: PWI domain [PF01480.19, score=80.7]} {Human: ENSG00000133226, SRRM1, serine and arginine repetitive matrix 1, [RH, Score=182, Expect=2e-47]} {Mouse: ENSMUSG00000028809, Srrm1, serine/arginine repetitive matrix 1, [RH, Score=183, Expect=7e-48]} {Dmel: FBgn0036340, SRm160, [RH, Score=168, Expect=4e-43]} {Celegans: WBGene00004706, rsr-1, SR protein related, [RH, Score=159, Expect=6e-41]} {Smed: dd_Smed_v6_3886_0_1, dd_Smed_v6_3886_0_1, [Score=169, Expect=9e-44]} {RNA1509_47406, RNA1509_48534} {RNA1310_944, RNA1509_47406} {RNA1509_47406, RNA815_383.1}
10.	MligTC455_14496	276	5.74	Mlig455_035570	Neo: - Age: Down-Up-Down	ANKEF1	1.702	-	-	-	-	0.752	0.950	Mlig455_035570 {REF} {Length: 2623} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=160.0]; Ankyrin repeats (many copies) [PF13637.8, score=132.4]; Ankyrin repeat [PF13606.8, score=111.5]; Ankyrin repeats (many copies) [PF13857.8, score=108.6]; Ankyrin repeat [PF00023.32, score=99.2]} {Human: ENSG00000132623, ANKEF1, ankyrin repeat and EF-hand domain containing 1, [Score=437, Expect=5e-143]} {Mouse: ENSMUSG00000074771, Ankef1, ankyrin repeat and EF-hand domain containing 1, [Score=434, Expect=6e-142]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=94.4, Expect=1e-19]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=84.3, Expect=2e-16]} {Smed: dd_Smed_v6_12476_0_1, dd_Smed_v6_12476_0_1, [Score=578, Expect=0.0]} {RNA1509_22782} {RNA1310_8283} {RNA815_2494.1}
11.	MligTC455_33543	280	5.82	Mlig455_023889	Neo: - Age: logFC(26M/2M)=-0.218	ANK3	0.964	-	-	-	-	0.964	-	Mlig455_023889 {REF} {Length: 6375} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=468.6]; Ankyrin repeats (many copies) [PF13637.8, score=413.4]; Ankyrin repeat [PF13606.8, score=356.0]; Ankyrin repeat [PF00023.32, score=339.0]; Ankyrin repeats (many copies) [PF13857.8, score=328.7]} {Human: ENSG00000151150, ANK3, ankyrin 3, [Score=271, Expect=3e-73]; ENSG00000029534, ANK1, ankyrin 1, [Score=269, Expect=6e-73]; ENSG00000145362, ANK2, ankyrin 2, [Score=262, Expect=2e-70]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=260, Expect=2e-71]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=256, Expect=9e-69]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=268, Expect=1e-72]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=253, Expect=2e-69]} {Smed: dd_Smed_v6_13156_0_1, dd_Smed_v6_13156_0_1, [RH, Score=759, Expect=0.0]} {RNA1509_11632, RNA1509_45311, RNA1509_59490} {RNA1310_2064, RNA1509_45311, RNA1509_59490} {RNA1509_45311, RNA1509_59490, RNA815_679.1}
12.	MligTC455_42505	927	19.32	Mlig455_044650	Neo: - Age: Up-Down-Down	SPEN	0.962	-	-	-	-	0.962	-	Mlig455_044650 {REF} {Length: 10984} {Pfam: SPOC domain [PF07744.15, score=106.9]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=84.5]; Occluded RNA-recognition motif [PF16842.7, score=26.0]} {Human: ENSG00000065526, SPEN, spen family transcriptional repressor, [RH, Score=226, Expect=4e-58]} {Mouse: ENSMUSG00000040761, Spen, spen family transcription repressor, [RH, Score=226, Expect=4e-58]} {Dmel: FBgn0016977, spen, split ends, [RH, Score=215, Expect=6e-55]} {Celegans: WBGene00008549, din-1, Daf-12-interacting protein 1, [RH, Score=94.0, Expect=2e-18]} {Smed: dd_Smed_v6_6458_0_1, dd_Smed_v6_6458_0_1, [RH, Score=189, Expect=1e-47]} {RNA1509_1038, RNA1509_14933, RNA1509_22578, RNA1509_24743, RNA1509_30163, RNA1509_44530, RNA1509_56973, RNA1509_59299, RNA1509_7345} {RNA1310_36.2, RNA1509_14933, RNA1509_22578, RNA1509_24743, RNA1509_30163, RNA1509_44530, RNA1509_56973, RNA1509_59299, RNA1509_7345} {RNA1509_14933, RNA1509_22578, RNA1509_24743, RNA1509_30163, RNA1509_44530, RNA1509_56973, RNA1509_59299, RNA1509_7345, RNA815_326}
13.	MligTC455_35726	1689	35.18	Mlig455_025824	Neo: - Age: -	FRMD5	0.957	-	-	-	-	0.957	-	Mlig455_025824 {REF} {Length: 4351} {TRANSSPLICED} {Pfam: FERM central domain [PF00373.20, score=53.9]; FERM C-terminal PH-like domain [PF09380.12, score=45.6]; FERM N-terminal domain [PF09379.12, score=40.1]} {Human: ENSG00000171877, FRMD5, FERM domain containing 5, [Score=208, Expect=3e-59]; ENSG00000172159, FRMD3, FERM domain containing 3, [Score=199, Expect=1e-55]} {Mouse: ENSMUSG00000027238, Frmd5, FERM domain containing 5, [Score=209, Expect=2e-59]; ENSMUSG00000049122, Frmd3, FERM domain containing 3, [Score=206, Expect=4e-58]} {Dmel: FBgn0032225, CG5022, [RH, Score=197, Expect=5e-55]} {Celegans: WBGene00001491, frm-4, FERM domain (Protein4.1-ezrin-radixin-moesin) family, [Score=157, Expect=1e-40]} {Smed: dd_Smed_v6_6227_0_1, dd_Smed_v6_6227_0_1, [RH, Score=294, Expect=1e-90]} {RNA1509_11468} {RNA1310_11514.1} {RNA815_12229}
14.	MligTC455_38922	1324	27.57	Mlig455_055899	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.333	MX2	0.955	-	-	-	-	0.955	-	Mlig455_055899 {REF} {Length: 3320} {Pfam: Dynamin central region [PF01031.22, score=177.8]; Dynamin family [PF00350.25, score=125.7]; Dynamin GTPase effector domain [PF02212.20, score=46.3]; 50S ribosome-binding GTPase [PF01926.25, score=21.2]; AAA ATPase domain [PF13191.8, score=19.7]} {Human: ENSG00000183486, MX2, MX dynamin like GTPase 2, [Score=319, Expect=1e-97]} {Mouse: ENSMUSG00000023341, Mx2, MX dynamin-like GTPase 2, [Score=308, Expect=3e-94]} {Dmel: FBgn0003392, shi, shibire, [Score=182, Expect=9e-48]} {Celegans: WBGene00001130, dyn-1, Dynamin, [Score=176, Expect=6e-46]} {Smed: dd_Smed_v6_2583_0_1, dd_Smed_v6_2583_0_1, [Score=198, Expect=2e-53]} {RNA1509_37170, RNA1509_6400} {RNA1310_6542.1, RNA1509_37170, RNA1509_6400} {RNA1509_37170, RNA1509_6400, RNA815_1426.1}
15.	MligTC455_41980	1108	23.09	Mlig455_048223	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.452 Regeneration-depleted BL: -2.044 Regeneration-depleted R6: -1.918		0.953	-	-	-	-	0.953	-	Mlig455_048223 {REF} {Length: 1924} {Pfam: Domain of unknown function (DUF1330) [PF07045.13, score=28.5]} {Smed: dd_Smed_v6_8243_0_1, dd_Smed_v6_8243_0_1, [Score=117, Expect=5e-31]} {RNA1509_5489} {RNA1310_15598} {RNA815_10198.1}
16.	MligTC455_27582	587	12.23	Mlig455_020527	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_020527 {REF} {Length: 1858} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF1772) [PF08592.13, score=19.9]} {RNA1509_48081} {RNA1310_6782.1, RNA1509_48081} {RNA1509_48081, RNA815_4292}

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