Data search
Results for MligTC455_42505
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_42505 | 927 | 19.32 | Mlig455_044650 | Neo: - Age: Up-Down-Down |
SPEN | Mlig455_044650 {REF} {Length: 10984} {Pfam: SPOC domain [PF07744.15, score=106.9]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=84.5]; Occluded RNA-recognition motif [PF16842.7, score=26.0]} {Human: ENSG00000065526, SPEN, spen family transcriptional repressor, [RH, Score=226, Expect=4e-58]} {Mouse: ENSMUSG00000040761, Spen, spen family transcription repressor, [RH, Score=226, Expect=4e-58]} {Dmel: FBgn0016977, spen, split ends, [RH, Score=215, Expect=6e-55]} {Celegans: WBGene00008549, din-1, Daf-12-interacting protein 1, [RH, Score=94.0, Expect=2e-18]} {Smed: dd_Smed_v6_6458_0_1, dd_Smed_v6_6458_0_1, [RH, Score=189, Expect=1e-47]} {RNA1509_1038, RNA1509_14933, RNA1509_22578, RNA1509_24743, RNA1509_30163, RNA1509_44530, RNA1509_56973, RNA1509_59299, RNA1509_7345} {RNA1310_36.2, RNA1509_14933, RNA1509_22578, RNA1509_24743, RNA1509_30163, RNA1509_44530, RNA1509_56973, RNA1509_59299, RNA1509_7345} {RNA1509_14933, RNA1509_22578, RNA1509_24743, RNA1509_30163, RNA1509_44530, RNA1509_56973, RNA1509_59299, RNA1509_7345, RNA815_326} |
Cumulative graph for MligTC455_42505
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.349 | 4.572 | 0.25844 | 0.90670 | |
| RegionR2 | 0.329 | 4.572 | 0.52552 | 0.89836 | |
| RegionR3 | -0.526 | 4.572 | 0.23240 | 0.77439 | |
| RegionR4 | 0.543 | 4.572 | 0.28446 | 0.59352 | |
| RegionR5 | -0.422 | 4.572 | 0.30772 | 0.64544 | |
| RegionR6 | 0.01 | 4.572 | 0.97974 | 1.00000 | |
| RegionR7 | 0.383 | 4.572 | 0.41631 | 1.00000 | |
| RegionR8 | 1.031 | 4.572 | 0.04372 | 0.40999 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.022 | 4.572 | 0.65379 | 1.00000 | |
| RegenerationR2 | 0.418 | 4.572 | 0.34742 | 0.78022 | |
| RegenerationR3 | 0.732 | 4.572 | 0.15146 | 0.58087 | |
| RegenerationR4 | -0.397 | 4.572 | 0.45407 | 0.84421 | |
| RegenerationR5 | 0.441 | 4.572 | 0.35581 | 0.76815 | |
| RegenerationR6 | 0.096 | 4.572 | 0.84450 | 0.99784 | |
| RegenerationBL | 0.003 | 4.572 | 0.99461 | 1.00000 | |
| RegenerationTP | -1.04 | 4.572 | 0.06708 | 0.41671 |
Genes with expression patterns similar to MligTC455_42505
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_42505 | 927 | 19.32 | Mlig455_044650 | Neo: - Age: Up-Down-Down |
SPEN | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_044650 {REF} {Length: 10984} {Pfam: SPOC domain [PF07744.15, score=106.9]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=84.5]; Occluded RNA-recognition motif [PF16842.7, score=26.0]} {Human: ENSG00000065526, SPEN, spen family transcriptional repressor, [RH, Score=226, Expect=4e-58]} {Mouse: ENSMUSG00000040761, Spen, spen family transcription repressor, [RH, Score=226, Expect=4e-58]} {Dmel: FBgn0016977, spen, split ends, [RH, Score=215, Expect=6e-55]} {Celegans: WBGene00008549, din-1, Daf-12-interacting protein 1, [RH, Score=94.0, Expect=2e-18]} {Smed: dd_Smed_v6_6458_0_1, dd_Smed_v6_6458_0_1, [RH, Score=189, Expect=1e-47]} {RNA1509_1038, RNA1509_14933, RNA1509_22578, RNA1509_24743, RNA1509_30163, RNA1509_44530, RNA1509_56973, RNA1509_59299, RNA1509_7345} {RNA1310_36.2, RNA1509_14933, RNA1509_22578, RNA1509_24743, RNA1509_30163, RNA1509_44530, RNA1509_56973, RNA1509_59299, RNA1509_7345} {RNA1509_14933, RNA1509_22578, RNA1509_24743, RNA1509_30163, RNA1509_44530, RNA1509_56973, RNA1509_59299, RNA1509_7345, RNA815_326} |
| 2. | MligTC455_05018 | 264 | 5.5 | Mlig455_054686 | Neo: - Age: - |
ATP11B | 1.786 | - | - | 0.834 | - | 0.952 | - | Mlig455_054686 {REF} {Length: 5712} {TRANSSPLICED} {Pfam: Phospholipid-translocating P-type ATPase C-terminal [PF16212.7, score=188.9]; Phospholipid-translocating ATPase N-terminal [PF16209.7, score=71.6]; haloacid dehalogenase-like hydrolase [PF00702.28, score=48.2]; E1-E2 ATPase [PF00122.22, score=43.2]; Cation transport ATPase (P-type) [PF13246.8, score=43.0]} {Human: ENSG00000058063, ATP11B, ATPase phospholipid transporting 11B (putative), [RH, Score=852, Expect=0.0]} {Mouse: ENSMUSG00000037400, Atp11b, ATPase, class VI, type 11B, [RH, Score=841, Expect=0.0]; ENSMUSG00000031441, Atp11a, ATPase, class VI, type 11A, [RH, Score=803, Expect=0.0]} {Dmel: FBgn0259221, CG42321, [Score=605, Expect=0.0]} {Celegans: WBGene00019166, tat-2, Phospholipid-transporting ATPase, [Score=566, Expect=0.0]} {Smed: dd_Smed_v6_10670_0_1, dd_Smed_v6_10670_0_1, [RH, Score=925, Expect=0.0]} {RNA1509_6335} {RNA1310_2362.1, RNA1509_6335} {RNA1509_6335, RNA815_3422} |
| 3. | MligTC455_26928 | 570 | 11.87 | Mlig455_032950 | Neo: - Age: logFC(26M/2M)=-0.353 |
DNAAF2 | 1.738 | - | - | - | 0.786 | 0.952 | - | Mlig455_032950 {REF} {Length: 5987} {TRANSSPLICED} {Pfam: PIH1 N-terminal domain [PF08190.14, score=164.4]; PIH1 CS-like domain [PF18201.3, score=70.8]} {Human: ENSG00000165506, DNAAF2, dynein axonemal assembly factor 2, [RH, Score=208, Expect=8e-56]} {Mouse: ENSMUSG00000020973, Dnaaf2, dynein, axonemal assembly factor 2, [RH, Score=197, Expect=2e-52]} {Dmel: FBgn0033224, Nop17l, Nop17 like, [RH, Score=236, Expect=1e-65]} {Smed: dd_Smed_v6_14336_0_1, dd_Smed_v6_14336_0_1, [RH, Score=310, Expect=9e-94]} {RNA1509_15744, RNA1509_20346, RNA1509_21241} {RNA1310_6945.1, RNA1509_15744, RNA1509_20346, RNA1509_21241} {RNA1509_15744, RNA1509_20346, RNA1509_21241, RNA815_416.1} |
| 4. | MligTC455_28549 | 1066 | 22.21 | Mlig455_022620, Mlig455_063617 | Neo: - Age: - |
IFT122 | 1.707 | - | 0.755 | - | - | 0.952 | - | Mlig455_022620 {REF} {Length: 4291} {Pfam: WD domain, G-beta repeat [PF00400.34, score=54.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=47.3]; WD40-like domain [PF17005.7, score=27.7]; Region in Clathrin and VPS [PF00637.22, score=22.4]; Tetratricopeptide repeat [PF13176.8, score=19.6]} {Human: ENSG00000163913, IFT122, intraflagellar transport 122, [RH, Score=1418, Expect=0.0]} {Mouse: ENSMUSG00000030323, Ift122, intraflagellar transport 122, [RH, Score=1440, Expect=0.0]} {Dmel: FBgn0265102, Oseg1, Outer segment 1, [RH, Score=1013, Expect=0.0]} {Celegans: WBGene00000906, daf-10, Intraflagellar transport protein 122 homolog, [RH, Score=914, Expect=0.0]} {Smed: dd_Smed_v6_11912_0_1, dd_Smed_v6_11912_0_1, [RH, Score=1303, Expect=0.0]} {RNA1509_2905} {RNA1310_2034.1, RNA1509_2905} {RNA1509_2905, RNA815_532} Mlig455_063617 {REF} {Length: 4336} {Pfam: WD domain, G-beta repeat [PF00400.34, score=54.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=47.1]; WD40-like domain [PF17005.7, score=29.2]; Region in Clathrin and VPS [PF00637.22, score=22.4]; Tetratricopeptide repeat [PF13176.8, score=19.6]} {Human: ENSG00000163913, IFT122, intraflagellar transport 122, [RH, Score=1420, Expect=0.0]} {Mouse: ENSMUSG00000030323, Ift122, intraflagellar transport 122, [RH, Score=1439, Expect=0.0]} {Dmel: FBgn0265102, Oseg1, Outer segment 1, [RH, Score=1014, Expect=0.0]} {Celegans: WBGene00000906, daf-10, Intraflagellar transport protein 122 homolog, [RH, Score=916, Expect=0.0]} {Smed: dd_Smed_v6_11912_0_1, dd_Smed_v6_11912_0_1, [RH, Score=1303, Expect=0.0]} {RNA1509_2905} {RNA1310_2034.1} {RNA815_532} |
| 5. | MligTC455_36809 | 2545 | 53.03 | Mlig455_031988, Mlig455_032040 | Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.264 Regeneration-upregulated BL: 1.259 Regeneration-enriched BL: 1.259 |
1.695 | - | - | 0.741 | 0.954 | - | - | Mlig455_031988 {REF} {Length: 5660} {TRANSSPLICED} {Pfam: UBA/TS-N domain [PF00627.33, score=19.0]} {Smed: dd_Smed_v6_2330_0_1, dd_Smed_v6_2330_0_1, [RH, Score=60.5, Expect=4e-09]} {RNA1509_46072, RNA1509_8892} {RNA1310_3692.1, RNA1509_46072} {RNA1509_46072, RNA815_13257.1} Mlig455_032040 {REF} {Length: 5830} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=20.3]; UBA/TS-N domain [PF00627.33, score=19.2]} {Smed: dd_Smed_v6_2330_0_1, dd_Smed_v6_2330_0_1, [RH, Score=60.5, Expect=4e-09]} {RNA1509_8892} {RNA1310_3692.1, RNA1509_8892} {RNA1509_8892, RNA815_13257.1} |
|
| 6. | MligTC455_21537 | 1413 | 29.43 | Mlig455_020692 | Neo: - Age: - |
ZNF687 | 1.678 | - | - | - | 0.954 | - | 0.724 | Mlig455_020692 {REF} {Length: 6162} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=28.8]; Zinc finger, C2H2 type [PF00096.28, score=26.0]; GAGA factor [PF09237.13, score=19.7]} {Human: ENSG00000143373, ZNF687, zinc finger protein 687, [RH, Score=102, Expect=2e-21]} {Mouse: ENSMUSG00000019338, Zfp687, zinc finger protein 687, [RH, Score=106, Expect=8e-23]} {Dmel: FBgn0004893, bowl, brother of odd with entrails limited, [Score=58.2, Expect=4e-08]} {Celegans: WBGene00003015, lin-29, Transcription factor, [Score=52.4, Expect=1e-06]} {RNA1509_12462, RNA1509_15125, RNA1509_29958, RNA1509_30146, RNA1509_4433} {RNA1310_2143.1, RNA1509_12462, RNA1509_15125, RNA1509_29958, RNA1509_30146, RNA1509_4433} {RNA1509_12462, RNA1509_15125, RNA1509_29958, RNA1509_30146, RNA1509_4433, RNA815_12738} |
| 7. | MligTC455_24343 | 499 | 10.39 | Mlig455_009796 | Neo: - Age: - |
0.969 | - | - | - | - | 0.969 | - | Mlig455_009796 {REF} {Length: 1301} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_8336} {RNA1310_6765} {RNA815_10771} | |
| 8. | MligTC455_46459 | 752 | 15.67 | Mlig455_035848 | Neo: - Age: Up-Down-Down |
ELL | 0.966 | - | - | - | - | 0.966 | - | Mlig455_035848 {REF} {Length: 3941} {TRANSSPLICED} {Pfam: RNA polymerase II elongation factor ELL [PF10390.11, score=137.9]; Occludin homology domain [PF07303.15, score=68.3]} {Human: ENSG00000105656, ELL, elongation factor for RNA polymerase II, [RH, Score=93.6, Expect=1e-19]; ENSG00000118985, ELL2, elongation factor for RNA polymerase II 2, [RH, Score=91.3, Expect=7e-19]} {Mouse: ENSMUSG00000001542, Ell2, elongation factor RNA polymerase II 2, [RH, Score=95.5, Expect=2e-20]} {Dmel: FBgn0014037, Su(Tpl), [RH, Score=66.2, Expect=4e-11]} {Smed: dd_Smed_v6_7663_0_1, dd_Smed_v6_7663_0_1, [RH, Score=53.5, Expect=2e-07]} {RNA1509_14210} {RNA1310_11237, RNA1509_14210} {RNA1509_14210, RNA815_14325} |
| 9. | MligTC455_30538 | 1019 | 21.24 | Mlig455_016650, Mlig455_016715 | Neo: - Age: logFC(26M/2M)=-0.348 |
TTC6 | 0.962 | - | - | - | - | 0.962 | - | Mlig455_016650 {REF} {Length: 6488} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF00515.30, score=271.0]; Tetratricopeptide repeat [PF07719.19, score=229.3]; TPR repeat [PF13414.8, score=155.2]; Tetratricopeptide repeat [PF13432.8, score=146.1]; Tetratricopeptide repeat [PF13371.8, score=127.6]; Tetratricopeptide repeat [PF13181.8, score=125.1]; Tetratricopeptide repeat [PF13431.8, score=119.1]; Tetratricopeptide repeat [PF13424.8, score=96.5]; Tetratricopeptide repeat [PF13428.8, score=59.5]; Tetratricopeptide repeat [PF14559.8, score=59.5]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=56.3]; Tetratricopeptide repeat [PF13176.8, score=46.2]; Tetratricopeptide repeat [PF13174.8, score=36.1]; Protein prenyltransferase alpha subunit repeat [PF01239.24, score=21.5]} {Human: ENSG00000139865, TTC6, tetratricopeptide repeat domain 6, [RH, Score=761, Expect=0.0]} {Mouse: ENSMUSG00000046782, Ttc6, tetratricopeptide repeat domain 6, [RH, Score=800, Expect=0.0]} {Dmel: FBgn0261403, sxc, super sex combs, [Score=108, Expect=4e-23]} {Celegans: WBGene00003858, ogt-1, UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase, [Score=101, Expect=5e-21]} {Smed: dd_Smed_v6_11462_0_1, dd_Smed_v6_11462_0_1, [RH, Score=1009, Expect=0.0]} {RNA1509_3314} {RNA1310_528.1} {RNA815_2163} Mlig455_016715 {REF} {Length: 6514} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF00515.30, score=266.3]; Tetratricopeptide repeat [PF07719.19, score=228.6]; TPR repeat [PF13414.8, score=152.7]; Tetratricopeptide repeat [PF13432.8, score=142.7]; Tetratricopeptide repeat [PF13371.8, score=128.6]; Tetratricopeptide repeat [PF13181.8, score=125.3]; Tetratricopeptide repeat [PF13431.8, score=116.3]; Tetratricopeptide repeat [PF13424.8, score=97.8]; Tetratricopeptide repeat [PF14559.8, score=59.5]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=55.2]; Tetratricopeptide repeat [PF13428.8, score=53.7]; Tetratricopeptide repeat [PF13176.8, score=41.9]; Tetratricopeptide repeat [PF13174.8, score=36.6]; Protein prenyltransferase alpha subunit repeat [PF01239.24, score=21.0]} {Human: ENSG00000139865, TTC6, tetratricopeptide repeat domain 6, [RH, Score=757, Expect=0.0]} {Mouse: ENSMUSG00000046782, Ttc6, tetratricopeptide repeat domain 6, [RH, Score=796, Expect=0.0]} {Dmel: FBgn0261403, sxc, super sex combs, [Score=107, Expect=1e-22]} {Celegans: WBGene00003858, ogt-1, UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase, [Score=100, Expect=8e-21]} {Smed: dd_Smed_v6_11462_0_1, dd_Smed_v6_11462_0_1, [RH, Score=1001, Expect=0.0]} {RNA1509_3314} {RNA1310_528.1, RNA1509_3314} {RNA1509_3314, RNA815_2163} |
| 10. | MligTC455_21538 | 956 | 19.92 | Mlig455_020760 | Neo: - Age: logFC(26M/2M)=-0.321 |
ZNF687 | 0.954 | - | - | - | 0.954 | - | - | Mlig455_020760 {REF} {Length: 4406} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=29.7]; Zinc finger, C2H2 type [PF00096.28, score=27.3]; GAGA factor [PF09237.13, score=19.8]} {Human: ENSG00000143373, ZNF687, zinc finger protein 687, [RH, Score=102, Expect=2e-21]} {Mouse: ENSMUSG00000019338, Zfp687, zinc finger protein 687, [RH, Score=106, Expect=7e-23]} {Dmel: FBgn0004893, bowl, brother of odd with entrails limited, [Score=57.8, Expect=4e-08]} {Celegans: WBGene00003015, lin-29, Transcription factor, [Score=52.4, Expect=1e-06]} {RNA1509_4433} {RNA1310_2143.1} {RNA815_12738} |
| 11. | MligTC455_24878 | 969 | 20.2 | Mlig455_045252 | Neo: - Age: logFC(26M/2M)=1.306 Region-enriched R5: 1.363/0.04356 |
LIMS2 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_045252 {REF} {Length: 1439} {TRANSSPLICED} {Pfam: LIM domain [PF00412.24, score=76.2]} {Human: ENSG00000072163, LIMS2, LIM zinc finger domain containing 2, [Score=92.0, Expect=3e-21]; ENSG00000256671, LIMS4, LIM zinc finger domain containing 4, [Score=87.8, Expect=1e-19]; ENSG00000256977, LIMS3, LIM zinc finger domain containing 3, [Score=87.8, Expect=1e-19]} {Mouse: ENSMUSG00000024395, Lims2, LIM and senescent cell antigen like domains 2, [Score=88.6, Expect=3e-20]; ENSMUSG00000019920, Lims1, LIM and senescent cell antigen-like domains 1, [Score=88.2, Expect=6e-20]} {Dmel: FBgn0020249, stck, steamer duck, [Score=101, Expect=4e-25]} {Celegans: WBGene00006826, unc-97, LIM domain-containing protein unc-97, [Score=107, Expect=2e-27]} {Smed: dd_Smed_v6_2476_0_1, dd_Smed_v6_2476_0_1, [Score=108, Expect=4e-28]} {RNA1509_24514} {RNA1310_13269.1} {RNA815_4936.1} |
| 12. | MligTC455_33116 | 1217 | 25.35 | Mlig455_042734, Mlig455_063152 | Neo: - Age: Up-Down-Down Region-enriched R5: 1.296/0.01110 |
LDB2 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_042734 {REF} {Length: 5440} {TRANSSPLICED} {Pfam: LIM-domain binding protein [PF01803.18, score=81.8]; DSBA-like thioredoxin domain [PF01323.22, score=52.4]; LIM interaction domain (LID) [PF17916.3, score=24.7]} {Human: ENSG00000169744, LDB2, LIM domain binding 2, [Score=194, Expect=9e-55]} {Mouse: ENSMUSG00000039706, Ldb2, LIM domain binding 2, [Score=190, Expect=1e-53]} {Dmel: FBgn0013764, Chi, Chip, [Score=170, Expect=6e-45]} {Celegans: WBGene00002261, ldb-1, F58A3.1a; LIM Domain Binding protein, [Score=82.4, Expect=4e-16]} {Smed: dd_Smed_v6_3678_0_1, dd_Smed_v6_3678_0_1, [Score=174, Expect=2e-46]} {RNA1509_17636} {RNA1310_5022} {RNA815_16469} Mlig455_063152 {REF} {Length: 6235} {TRANSSPLICED} {Pfam: LIM-domain binding protein [PF01803.18, score=78.1]; LIM interaction domain (LID) [PF17916.3, score=24.9]} {Human: ENSG00000169744, LDB2, LIM domain binding 2, [Score=191, Expect=2e-54]} {Mouse: ENSMUSG00000039706, Ldb2, LIM domain binding 2, [Score=187, Expect=4e-53]} {Dmel: FBgn0013764, Chi, Chip, [Score=172, Expect=6e-46]} {Celegans: WBGene00002261, ldb-1, F58A3.1a; LIM Domain Binding protein, [Score=80.5, Expect=2e-15]} {Smed: dd_Smed_v6_3678_0_1, dd_Smed_v6_3678_0_1, [Score=172, Expect=7e-46]} {RNA1509_17636} {RNA1310_5022} {RNA815_16469} |