TomoSeq data search

Data search

Results for MligTC455_30879

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_30879

71

1.48

Mlig455_051449

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.777

Mlig455_051449 {REF} {Length: 649} {TRANSSPLICED} {RNA1509_13351} {RNA1310_56244} {RNA815_28747.1}

Cumulative graph for MligTC455_30879

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.685	1.48	0.64727	1.00000
RegionR2	1.258	1.48	0.35356	0.74753
RegionR3	-0.243	1.48	0.92593	1.00000
RegionR4	-0.122	1.48	0.91630	1.00000
RegionR5	0.037	1.48	0.85087	1.00000
RegionR6	-1.34	1.48	0.99712	1.00000
RegionR7	1.313	1.48	0.39213	1.00000
RegionR8	1.782	1.48	0.31207	0.94427

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.393	1.48	0.99997	1.00000
RegenerationR2	0.561	1.48	0.48113	0.86373
RegenerationR3	1.411	1.48	0.22937	0.66411
RegenerationR4	1.866	1.48	0.10561	0.50116
RegenerationR5	1.247	1.48	0.22432	0.65850
RegenerationR6	1.61	1.48	0.27680	0.62571
RegenerationBL	0.703	1.48	0.59356	0.94271
RegenerationTP	0.737	1.48	0.57327	0.94613

Genes with expression patterns similar to MligTC455_30879

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_30879	71	1.48	Mlig455_051449	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.777		4	-	-	1.000	1.000	1.000	1.000	Mlig455_051449 {REF} {Length: 649} {TRANSSPLICED} {RNA1509_13351} {RNA1310_56244} {RNA815_28747.1}
2.	MligTC455_37041	1194	24.87	Mlig455_048993, Mlig455_049010	Neo: - Age: - Region-enriched R2: 1.338/0.04259	SYNGR1	0.969	-	-	-	0.969	-	-	Mlig455_048993 {REF} {Length: 2202} {Pfam: Membrane-associating domain [PF01284.25, score=74.9]} {Human: ENSG00000100321, SYNGR1, synaptogyrin 1, [RH, Score=156, Expect=7e-47]} {Mouse: ENSMUSG00000022415, Syngr1, synaptogyrin 1, [RH, Score=159, Expect=4e-48]; ENSMUSG00000007021, Syngr3, synaptogyrin 3, [RH, Score=156, Expect=5e-47]} {Dmel: FBgn0033876, Syngr, Synaptogyrin, [RH, Score=139, Expect=2e-40]} {Smed: dd_Smed_v6_6478_0_1, dd_Smed_v6_6478_0_1, [RH, Score=202, Expect=4e-65]} {RNA1509_15709, RNA1509_33915, RNA1509_38141} {RNA1310_33819, RNA1509_15709, RNA1509_33915, RNA1509_38141} {RNA1509_15709, RNA1509_33915, RNA1509_38141, RNA815_10361.1} Mlig455_049010 {REF} {Length: 2149} {Pfam: Membrane-associating domain [PF01284.25, score=77.0]} {Human: ENSG00000100321, SYNGR1, synaptogyrin 1, [RH, Score=157, Expect=6e-47]} {Mouse: ENSMUSG00000022415, Syngr1, synaptogyrin 1, [RH, Score=159, Expect=4e-48]; ENSMUSG00000007021, Syngr3, synaptogyrin 3, [RH, Score=155, Expect=2e-46]} {Dmel: FBgn0033876, Syngr, Synaptogyrin, [RH, Score=139, Expect=2e-40]} {Smed: dd_Smed_v6_6478_0_1, dd_Smed_v6_6478_0_1, [RH, Score=204, Expect=2e-65]} {RNA1509_33915} {RNA1310_33819} {RNA815_10361.1}
3.	MligTC455_38958	335	6.98	Mlig455_068315	Neo: - Age: -		0.968	-	-	-	-	-	0.968	Mlig455_068315 {REF} {Length: 2665} {Pfam: EF-hand domain [PF13405.8, score=31.1]; EF-hand domain pair [PF13499.8, score=27.3]; EF hand [PF00036.34, score=22.7]} {Mouse: ENSMUSG00000030321, Efcab12, EF-hand calcium binding domain 12, [RH, Score=65.1, Expect=2e-10]} {Smed: dd_Smed_v6_10608_0_1, dd_Smed_v6_10608_0_1, [RH, Score=57.8, Expect=7e-10]} {RNA1509_20232} {RNA1310_17116} {RNA815_14272}
4.	MligTC455_22564	697	14.51	Mlig455_066912	Neo: - Age: - Region-specific R4: 3.828 Region-enriched R4: 2.651/0.00001 Regeneration-downregulated R4: -2.406 Regeneration-depleted R4: -2.406		0.966	-	-	-	-	0.966	-	Mlig455_066912 {REF} {Length: 1052} {Pfam: AAA domain [PF13521.8, score=62.7]; AAA domain [PF13238.8, score=24.0]} {RNA1509_15448} {RNA1310_37679} {RNA815_24534}
5.	MligTC455_50744	795	16.56	Mlig455_001649, Mlig455_001716	Neo: - Age: logFC(26M/2M)=-0.294 Region-enriched R2: 1.407/0.04720 Regeneration-downregulated BL: -3.166 Regeneration-depleted BL: -3.166	LRRK2, MFHAS1	0.962	-	-	-	-	-	0.962	Mlig455_001649 {REF} {Length: 4143} {Pfam: Leucine rich repeat [PF13855.8, score=79.2]; Leucine Rich repeats (2 copies) [PF12799.9, score=49.9]; Ras family [PF00071.24, score=49.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=47.6]; C-terminal of Roc, COR, domain [PF16095.7, score=38.0]; Leucine Rich Repeat [PF00560.35, score=29.7]; ABC transporter [PF00005.29, score=19.9]} {Human: ENSG00000147324, MFHAS1, malignant fibrous histiocytoma amplified sequence 1, [Score=122, Expect=2e-27]; ENSG00000285022, AC270282.1, malignant fibrous histiocytoma amplified sequence 1, [Score=122, Expect=2e-27]} {Mouse: ENSMUSG00000070056, Mfhas1, malignant fibrous histiocytoma amplified sequence 1, [Score=109, Expect=7e-24]} {Dmel: FBgn0038504, Sur-8, [Score=71.6, Expect=2e-12]} {Celegans: WBGene00016974, lron-15, ELRR (Extracellular Leucine-Rich Repeat) ONly, [Score=75.5, Expect=2e-13]} {Smed: dd_Smed_v6_14500_0_1, dd_Smed_v6_14500_0_1, [RH, Score=376, Expect=1e-113]} {RNA1509_6354} {RNA1310_2733, RNA1509_6354} {RNA1509_6354, RNA815_800} Mlig455_001716 {REF} {Length: 3568} {Pfam: Leucine rich repeat [PF13855.8, score=75.4]; Ras family [PF00071.24, score=48.8]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=47.7]; Leucine Rich repeats (2 copies) [PF12799.9, score=47.1]; C-terminal of Roc, COR, domain [PF16095.7, score=38.1]; Leucine Rich Repeat [PF00560.35, score=29.2]; ABC transporter [PF00005.29, score=19.8]} {Human: ENSG00000188906, LRRK2, leucine rich repeat kinase 2, [Score=85.5, Expect=4e-16]} {Mouse: ENSMUSG00000036273, Lrrk2, leucine-rich repeat kinase 2, [Score=85.5, Expect=3e-16]; ENSMUSG00000073375, Lrrc30, leucine rich repeat containing 30, [Score=82.4, Expect=1e-16]} {Dmel: FBgn0038504, Sur-8, [Score=63.5, Expect=8e-10]} {Celegans: WBGene00016974, lron-15, ELRR (Extracellular Leucine-Rich Repeat) ONly, [Score=72.4, Expect=1e-12]} {Smed: dd_Smed_v6_14500_0_1, dd_Smed_v6_14500_0_1, [Score=283, Expect=8e-81]} {RNA1509_6354} {RNA1310_2733} {RNA815_800}
6.	MligTC455_52972	495	10.31	Mlig455_006569	Neo: - Age: -		0.962	-	-	-	-	-	0.962	Mlig455_006569 {REF} {Length: 2364} {TRANSSPLICED} {Pfam: Gamma-glutamyl cyclotransferase, AIG2-like [PF06094.14, score=41.4]; AIG2-like family [PF13772.8, score=36.0]} {RNA1509_12874, RNA1509_28234, RNA1509_32161} {RNA1310_10210.1, RNA1509_12874, RNA1509_28234, RNA1509_32161} {RNA1509_12874, RNA1509_28234, RNA1509_32161, RNA815_7283}
7.	MligTC455_42050	59	1.22	Mlig455_001220	Neo: - Age: -	SLC12A8	0.956	-	-	-	0.956	-	-	Mlig455_001220 {REF} {Length: 3696} {TRANSSPLICED} {Pfam: Amino acid permease [PF00324.23, score=140.2]} {Human: ENSG00000221955, SLC12A8, solute carrier family 12 member 8, [RH, Score=323, Expect=1e-100]} {Mouse: ENSMUSG00000035506, Slc12a8, solute carrier family 12 (potassium/chloride transporters), member 8, [RH, Score=317, Expect=1e-98]} {Dmel: FBgn0024365, CG12773, [Score=417, Expect=2e-137]} {Celegans: WBGene00017350, F10E7.9, [RH, Score=337, Expect=6e-108]} {Smed: dd_Smed_v6_8108_0_1, dd_Smed_v6_8108_0_1, [RH, Score=427, Expect=9e-142]} {RNA1509_48906} {RNA1310_21016.1, RNA1509_48906} {RNA1509_48906, RNA815_8485}
8.	MligTC455_54258	796	16.59	Mlig455_001145, Mlig455_001307	Neo: - Age: logFC(26M/2M)=0.299	ANKRD63	0.956	-	-	-	-	-	0.956	Mlig455_001145 {REF} {Length: 3319} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=81.5]; Ankyrin repeats (3 copies) [PF12796.9, score=75.9]; Ankyrin repeat [PF00023.32, score=65.6]; Ankyrin repeat [PF13606.8, score=59.1]; Ankyrin repeats (many copies) [PF13857.8, score=45.3]} {Human: ENSG00000230778, ANKRD63, ankyrin repeat domain 63, [Score=66.6, Expect=3e-11]} {Mouse: ENSMUSG00000040183, Ankrd6, ankyrin repeat domain 6, [Score=67.0, Expect=3e-11]; ENSMUSG00000078137, Ankrd63, ankyrin repeat domain 63, [Score=65.5, Expect=4e-11]; ENSMUSG00000053580, Tanc2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=64.3, Expect=2e-10]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=59.3, Expect=5e-09]} {Celegans: WBGene00003196, mel-11, MEL-11, [Score=51.2, Expect=1e-06]} {Smed: dd_Smed_v6_14278_0_1, dd_Smed_v6_14278_0_1, [RH, Score=97.1, Expect=7e-22]} {RNA1509_28990} {RNA1310_26685, RNA1509_28990} {RNA1509_28990, RNA815_11794} Mlig455_001307 {REF} {Length: 2867} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=81.5]; Ankyrin repeats (3 copies) [PF12796.9, score=75.9]; Ankyrin repeat [PF00023.32, score=65.6]; Ankyrin repeat [PF13606.8, score=59.1]; Ankyrin repeats (many copies) [PF13857.8, score=45.3]} {Human: ENSG00000230778, ANKRD63, ankyrin repeat domain 63, [Score=66.6, Expect=3e-11]; ENSG00000170921, TANC2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=63.5, Expect=5e-10]} {Mouse: ENSMUSG00000040183, Ankrd6, ankyrin repeat domain 6, [Score=67.0, Expect=3e-11]; ENSMUSG00000078137, Ankrd63, ankyrin repeat domain 63, [Score=65.5, Expect=4e-11]; ENSMUSG00000053580, Tanc2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=64.7, Expect=2e-10]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=59.3, Expect=5e-09]} {Celegans: WBGene00003196, mel-11, MEL-11, [Score=51.6, Expect=1e-06]} {Smed: dd_Smed_v6_14278_0_1, dd_Smed_v6_14278_0_1, [RH, Score=97.1, Expect=6e-22]} {RNA1509_18326, RNA1509_18681} {RNA1310_26685, RNA1509_18326, RNA1509_18681} {RNA1509_18326, RNA1509_18681, RNA815_11794}
9.	MligTC455_43767	1310	27.29	Mlig455_048807	Neo: - Age: Down-Down-Up	EFHB	0.953	-	-	-	-	-	0.953	Mlig455_048807 {REF} {Length: 2201} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=45.4]; EF hand [PF00036.34, score=42.2]; EF-hand domain [PF13405.8, score=40.2]; Family of unknown function (DUF5580) [PF17743.3, score=32.2]; EF hand [PF13202.8, score=31.1]; EF-hand domain pair [PF13833.8, score=18.8]} {Human: ENSG00000163576, EFHB, EF-hand domain family member B, [RH, Score=386, Expect=1e-125]} {Mouse: ENSMUSG00000023931, Efhb, EF hand domain family, member B, [RH, Score=359, Expect=7e-114]} {Dmel: FBgn0004910, Eip63F-1, Ecdysone-induced protein 63F 1, [Score=53.1, Expect=6e-08]} {Celegans: WBGene00000286, cal-2, CALmodulin related genes; Calmodulin-like protein, [Score=52.8, Expect=7e-08]} {Smed: dd_Smed_v6_11909_0_1, dd_Smed_v6_11909_0_1, [RH, Score=351, Expect=3e-114]} {RNA1509_2205} {RNA1310_7693} {RNA815_3913}
10.	MligTC455_45329	258	5.36	Mlig455_050987	Neo: - Age: -	HTR1A	0.951	-	-	-	0.951	-	-	Mlig455_050987 {REF} {Length: 3788} {TRANSSPLICED} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=250.7]; Inhibitor of Apoptosis domain [PF00653.23, score=46.3]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=39.6]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=26.0]} {Human: ENSG00000178394, HTR1A, 5-hydroxytryptamine receptor 1A, [Score=232, Expect=6e-67]; ENSG00000148680, HTR7, 5-hydroxytryptamine receptor 7, [Score=231, Expect=6e-66]} {Mouse: ENSMUSG00000024798, Htr7, 5-hydroxytryptamine (serotonin) receptor 7, [Score=231, Expect=2e-66]; ENSMUSG00000021721, Htr1a, 5-hydroxytryptamine (serotonin) receptor 1A, [Score=224, Expect=2e-64]} {Dmel: FBgn0004573, 5-HT7, 5-hydroxytryptamine (serotonin) receptor 7, [RH, Score=280, Expect=2e-83]} {Celegans: WBGene00004780, ser-7, SERotonin/octopamine receptor family, [RH, Score=226, Expect=2e-65]} {Smed: dd_Smed_v6_16752_0_1, dd_Smed_v6_16752_0_1, [Score=367, Expect=4e-116]} {RNA1509_39117, RNA1509_8008} {RNA1310_13482, RNA1509_8008} {RNA1509_8008, RNA815_16168}
11.	MligTC455_51511	239	4.98	Mlig455_037787	Neo: - Age: Down-Up-Down	BRDT	0.951	-	-	-	-	0.951	-	Mlig455_037787 {REF} {Length: 3499} {TRANSSPLICED} {Pfam: Bromodomain [PF00439.27, score=112.2]; Bromodomain extra-terminal - transcription regulation [PF17035.7, score=95.2]} {Human: ENSG00000137948, BRDT, bromodomain testis associated, [Score=213, Expect=5e-58]} {Mouse: ENSMUSG00000029279, Brdt, bromodomain, testis-specific, [Score=212, Expect=7e-58]} {Dmel: FBgn0004656, fs(1)h, female sterile (1) homeotic, [Score=124, Expect=7e-29]} {Celegans: WBGene00022473, bet-1, Bromodomain-containing protein bet-1, [RH, Score=194, Expect=2e-52]} {Smed: dd_Smed_v6_8457_0_1, dd_Smed_v6_8457_0_1, [Score=268, Expect=4e-80]} {RNA1509_9248} {RNA1310_4151.1} {RNA815_11550}
12.	MligTC455_28440	96	2	Mlig455_042908	Neo: - Age: -		0.95	-	-	-	0.950	-	-	Mlig455_042908 {REF} {Length: 5108} {TRANSSPLICED} {RNA1509_6737} {RNA1310_143.1} {RNA815_12188}
13.	MligTC455_34585	460	9.58	Mlig455_055017	Neo: - Age: logFC(26M/2M)=-0.577	SMTN	0.95	-	-	-	-	-	0.950	Mlig455_055017 {REF} {Length: 6974} {Pfam: Immunoglobulin I-set domain [PF07679.18, score=176.3]; Immunoglobulin domain [PF13927.8, score=114.3]; Calponin homology (CH) domain [PF00307.33, score=68.2]; Immunoglobulin V-set domain [PF07686.19, score=51.1]; Smoothelin cytoskeleton protein [PF12510.10, score=44.4]; Immunoglobulin domain [PF00047.27, score=43.3]; Immunoglobulin domain [PF13895.8, score=30.4]; CAMSAP CH domain [PF11971.10, score=29.0]; Natural killer cell receptor 2B4 [PF11465.10, score=21.4]; Izumo-like Immunoglobulin domain [PF16706.7, score=21.4]} {Human: ENSG00000183963, SMTN, smoothelin, [RH, Score=164, Expect=4e-40]} {Mouse: ENSMUSG00000020439, Smtn, smoothelin, [Score=155, Expect=1e-37]} {Dmel: FBgn0085446, CG34417, [RH, Score=168, Expect=4e-41]} {Celegans: WBGene00020530, T15B12.1, [Score=138, Expect=3e-34]} {Smed: dd_Smed_v6_6934_0_1, dd_Smed_v6_6934_0_1, [Score=156, Expect=4e-40]} {RNA1509_18420, RNA1509_3882} {RNA1310_786, RNA1509_18420, RNA1509_3882} {RNA1509_18420, RNA1509_3882, RNA815_238.1}

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