M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_28440

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_28440 96 2.00 Mlig455_042908

Neo: -

Age: -

 Mlig455_042908 {REF} {Length: 5108} {TRANSSPLICED} {RNA1509_6737} {RNA1310_143.1} {RNA815_12188}

Cumulative graph for MligTC455_28440

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.23 1.889 0.42933 1.00000
RegionR2 2.199 1.889 0.05862 0.29151
RegionR3 0.25 1.889 0.77190 1.00000
RegionR4 -0.318 1.889 0.93326 1.00000
RegionR5 -0.315 1.889 0.93642 1.00000
RegionR6 -0.067 1.889 0.88725 1.00000
RegionR7 1.224 1.889 0.40488 1.00000
RegionR8 1.257 1.889 0.50194 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.453 1.889 1.00000 1.00000
RegenerationR2 -0.265 1.889 0.66801 0.94437
RegenerationR3 0.514 1.889 0.58744 0.90258
RegenerationR4 0.376 1.889 0.67142 0.94279
RegenerationR5 0.769 1.889 0.36275 0.77385
RegenerationR6 1.157 1.889 0.23663 0.58405
RegenerationBL 0.755 1.889 0.49398 0.85883
RegenerationTP 0.721 1.889 0.54539 0.93017


Genes with expression patterns similar to MligTC455_28440

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_28440 96 2 Mlig455_042908

Neo: -

Age: -

 4 - - 1.000 1.000 1.000 1.000 Mlig455_042908 {REF} {Length: 5108} {TRANSSPLICED} {RNA1509_6737} {RNA1310_143.1} {RNA815_12188}
2. MligTC455_31673 2190 45.63 Mlig455_020494, Mlig455_020496, Mlig455_021456, Mlig455_022005, Mlig455_028753, Mlig455_029272, Mlig455_032615, Mlig455_035661, Mlig455_035663, Mlig455_040170, Mlig455_041027, Mlig455_042568, Mlig455_052047, Mlig455_052049, Mlig455_060462, Mlig455_060472, Mlig455_060475, Mlig455_062821, Mlig455_063990, Mlig455_071051, Mlig455_071053

Neo: -

Age: -

 2.73 - - - 0.969 0.950 0.811

Mlig455_020494 {REF} {Length: 3502} {NoTransDecoderORF} {RNA1509_43132} {RNA1310_143.1} {RNA815_12188}

Mlig455_020496 {REF} {Length: 45} {NoTransDecoderORF} {RNA1509_51272} {RNA1310_18898} {RNA815_26166}

Mlig455_021456 {REF} {Length: 6612} {RNA1509_43132} {RNA1310_143.1} {RNA815_12188}

Mlig455_022005 {REF} {Length: 5643} {NoTransDecoderORF} {RNA1509_46} {RNA1310_143.1} {RNA815_12188}

Mlig455_028753 {REF} {Length: 4224} {NoTransDecoderORF} {RNA1509_43132} {RNA1310_143.1} {RNA815_12188}

Mlig455_029272 {REF} {Length: 842} {NoTransDecoderORF} {RNA1509_43624} {RNA1310_9389.2} {RNA815_12646}

Mlig455_032615 {REF} {Length: 1323} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_43132} {RNA1310_143.1} {RNA815_12188}

Mlig455_035661 {REF} {Length: 2146} {NoTransDecoderORF} {RNA1509_43132} {RNA1310_143.1} {RNA815_12188}

Mlig455_035663 {REF} {Length: 1967} {NoTransDecoderORF} {RNA1509_10119} {RNA1310_143.1} {RNA815_11686}

Mlig455_040170 {REF} {Length: 2245} {NoTransDecoderORF} {RNA1509_43132} {RNA1310_143.1} {RNA815_12188}

Mlig455_041027 {REF} {Length: 2951} {RNA1509_46} {RNA1310_143.1} {RNA815_12188}

Mlig455_042568 {REF} {Length: 3443} {NoTransDecoderORF} {RNA1509_46, RNA1509_6737} {RNA1310_143.1, RNA1509_6737} {RNA1509_6737, RNA815_12188}

Mlig455_052047 {REF} {Length: 2362} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_40407} {RNA1310_143.1, RNA1509_40407} {RNA1509_40407, RNA815_12188}

Mlig455_052049 {REF} {Length: 2860} {NoTransDecoderORF} {RNA1509_43132} {RNA1310_143.1} {RNA815_12188}

Mlig455_060462 {REF} {Length: 1740} {NoTransDecoderORF} {RNA1509_43132} {RNA1310_143.1} {RNA815_12188}

Mlig455_060472 {REF} {Length: 2246} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_43132} {RNA1310_143.1} {RNA815_12188}

Mlig455_060475 {REF} {Length: 320} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_43624} {RNA1310_18898} {RNA815_12646}

Mlig455_062821 {REF} {Length: 1726} {NoTransDecoderORF} {RNA1509_43132} {RNA1310_143.1} {RNA815_12188}

Mlig455_063990 {REF} {Length: 1968} {NoTransDecoderORF} {RNA1509_10119, RNA1509_22165, RNA1509_43624} {RNA1310_143.1, RNA1509_10119, RNA1509_22165, RNA1509_43624} {RNA1509_10119, RNA1509_22165, RNA1509_43624, RNA815_11686}

Mlig455_071051 {REF} {Length: 1795} {NoTransDecoderORF} {RNA1509_43132} {RNA1310_143.1} {RNA815_12188}

Mlig455_071053 {REF} {Length: 339} {NoTransDecoderORF} {RNA1509_51208} {RNA1310_52445} {RNA815_23064}
3. MligTC455_37128 155 3.22 Mlig455_066474, Mlig455_066476

Neo: -

Age: -

 1.822 - - - 0.865 0.957 -

Mlig455_066474 {REF} {Length: 669} {Celegans: WBGene00022511, ZC53.4, [Score=68.6, Expect=3e-15]} {Smed: dd_Smed_v6_9974_1_2, dd_Smed_v6_9974_1_2, [Score=55.8, Expect=8e-11]} {RNA1509_53241} {RNA1310_47825} {RNA815_1671.1}

Mlig455_066476 {REF} {Length: 7427} {Pfam: Coilin N-terminus [PF15862.7, score=22.6]} {RNA1509_23774} {RNA1310_17710.2} {RNA815_1857}
4. MligTC455_07755 197 4.11 Mlig455_038727

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.657

 ANKRD6 1.789 - - 0.955 0.834 - - Mlig455_038727 {REF} {Length: 5506} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=158.2]; Ankyrin repeats (many copies) [PF13637.8, score=101.5]; Ankyrin repeat [PF00023.32, score=100.3]; Ankyrin repeats (many copies) [PF13857.8, score=93.9]; Ankyrin repeat [PF13606.8, score=92.0]} {Human: ENSG00000135299, ANKRD6, ankyrin repeat domain 6, [Score=171, Expect=2e-44]} {Mouse: ENSMUSG00000040183, Ankrd6, ankyrin repeat domain 6, [Score=178, Expect=5e-47]} {Dmel: FBgn0086898, dgo, diego, [Score=160, Expect=2e-40]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=129, Expect=2e-30]} {Smed: dd_Smed_v6_10764_0_3, dd_Smed_v6_10764_0_3, [Score=222, Expect=3e-63]} {RNA1509_29314} {RNA1310_7295} {RNA815_14899}
5. MligTC455_28147 79 1.65 Mlig455_012968

Neo: -

Age: Down-Up-Down

 1.718 - - - 0.970 0.748 - Mlig455_012968 {REF} {Length: 4172} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_53435} {RNA1310_34828.2} {RNA815_11419.1}
6. MligTC455_40768 386 8.04 Mlig455_053989

Neo: -

Age: Down-Down-Up

 0.974 - - - - 0.974 - Mlig455_053989 {REF} {Length: 1232} {TRANSSPLICED} {Pfam: zinc-RING finger domain [PF14634.8, score=20.4]} {RNA1509_39917} {RNA1310_28122, RNA1509_39917}
7. MligTC455_39153 43 0.9 Mlig455_041661

Neo: -

Age: -

 0.969 - - 0.969 - - - Mlig455_041661 {REF} {Length: 1670} {RNA1509_56316} {RNA1310_3607.1, RNA1509_56316} {RNA1509_56316, RNA815_31436}
8. MligTC455_34330 50 1.03 Mlig455_025815

Neo: -

Age: Down-Up-Down

 FAIM 0.968 - - 0.968 - - - Mlig455_025815 {REF} {Length: 1108} {TRANSSPLICED} {Pfam: Fas apoptotic inhibitory molecule (FAIM1) [PF06905.15, score=227.6]} {Human: ENSG00000158234, FAIM, Fas apoptotic inhibitory molecule, [Score=190, Expect=2e-61]} {Mouse: ENSMUSG00000032463, Faim, Fas apoptotic inhibitory molecule, [Score=187, Expect=1e-60]} {Dmel: FBgn0033985, CG10257, [Score=128, Expect=7e-37]} {Celegans: WBGene00016633, C44B11.1, [Score=165, Expect=8e-52]} {Smed: dd_Smed_v6_9854_0_1, dd_Smed_v6_9854_0_1, [RH, Score=179, Expect=1e-57]} {RNA1509_59589} {RNA1310_30778} {RNA815_14130.1}
9. MligTC455_22049 396 8.25 Mlig455_057361, Mlig455_059568

Neo: -

Age: logFC(26M/2M)=0.455

 KY 0.963 - - 0.963 - - -

Mlig455_057361 {REF} {Length: 2541} {Human: ENSG00000174611, KY, kyphoscoliosis peptidase, [Score=87.8, Expect=2e-17]} {Mouse: ENSMUSG00000035606, Ky, kyphoscoliosis peptidase, [Score=86.3, Expect=3e-17]} {Dmel: FBgn0050147, Hil, Hillarin, [Score=93.2, Expect=2e-19]} {Smed: dd_Smed_v6_5330_0_1, dd_Smed_v6_5330_0_1, [Score=99.4, Expect=2e-21]} {RNA1509_17146} {RNA1310_7357.1} {RNA815_2394.1}

Mlig455_059568 {REF} {Length: 2657} {TRANSSPLICED} {Human: ENSG00000174611, KY, kyphoscoliosis peptidase, [Score=85.9, Expect=9e-17]} {Mouse: ENSMUSG00000035606, Ky, kyphoscoliosis peptidase, [Score=87.4, Expect=2e-17]} {Dmel: FBgn0050147, Hil, Hillarin, [Score=90.9, Expect=1e-18]} {Smed: dd_Smed_v6_5330_0_1, dd_Smed_v6_5330_0_1, [Score=99.8, Expect=2e-21]} {RNA1509_17146} {RNA1310_7357.1} {RNA815_2394.1}
10. MligTC455_31680 144 2.99 Mlig455_044648

Neo: Irradiation

Age: logFC(26M/2M)=0.782

Region-enriched R5: 2.265/0.01715

 PIF1 0.963 - - - - 0.963 - Mlig455_044648 {REF} {Length: 14189} {Pfam: PIF1-like helicase [PF05970.16, score=331.9]; Helitron helicase-like domain at N-terminus [PF14214.8, score=199.7]; AAA domain [PF13604.8, score=43.9]; Helicase [PF02689.16, score=23.6]; UvrD-like helicase C-terminal domain [PF13538.8, score=19.6]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=89.7, Expect=2e-17]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=90.9, Expect=6e-18]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=88.6, Expect=2e-17]} {Celegans: WBGene00019136, F59H6.5, [RH, Score=806, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=106, Expect=3e-23]} {RNA1509_7410} {RNA1310_3337} {RNA815_358.1}
11. MligTC455_20071 186 3.86 Mlig455_020495, Mlig455_021455, Mlig455_060464

Neo: -

Age: -

 0.959 - - - - 0.959 -

Mlig455_020495 {REF} {Length: 388} {NoTransDecoderORF} {RNA1509_29468} {RNA1310_143.1} {RNA815_104.1}

Mlig455_021455 {REF} {Length: 530} {NoTransDecoderORF} {RNA1509_43624} {RNA1310_9389.1} {RNA815_104.1}

Mlig455_060464 {REF} {Length: 346} {NoTransDecoderORF} {RNA1509_29468} {RNA1310_143.1} {RNA815_104.1}
12. MligTC455_37041 1194 24.87 Mlig455_048993, Mlig455_049010

Neo: -

Age: -

Region-enriched R2: 1.338/0.04259

 SYNGR1 0.958 - - - 0.958 - -

Mlig455_048993 {REF} {Length: 2202} {Pfam: Membrane-associating domain [PF01284.25, score=74.9]} {Human: ENSG00000100321, SYNGR1, synaptogyrin 1, [RH, Score=156, Expect=7e-47]} {Mouse: ENSMUSG00000022415, Syngr1, synaptogyrin 1, [RH, Score=159, Expect=4e-48]; ENSMUSG00000007021, Syngr3, synaptogyrin 3, [RH, Score=156, Expect=5e-47]} {Dmel: FBgn0033876, Syngr, Synaptogyrin, [RH, Score=139, Expect=2e-40]} {Smed: dd_Smed_v6_6478_0_1, dd_Smed_v6_6478_0_1, [RH, Score=202, Expect=4e-65]} {RNA1509_15709, RNA1509_33915, RNA1509_38141} {RNA1310_33819, RNA1509_15709, RNA1509_33915, RNA1509_38141} {RNA1509_15709, RNA1509_33915, RNA1509_38141, RNA815_10361.1}

Mlig455_049010 {REF} {Length: 2149} {Pfam: Membrane-associating domain [PF01284.25, score=77.0]} {Human: ENSG00000100321, SYNGR1, synaptogyrin 1, [RH, Score=157, Expect=6e-47]} {Mouse: ENSMUSG00000022415, Syngr1, synaptogyrin 1, [RH, Score=159, Expect=4e-48]; ENSMUSG00000007021, Syngr3, synaptogyrin 3, [RH, Score=155, Expect=2e-46]} {Dmel: FBgn0033876, Syngr, Synaptogyrin, [RH, Score=139, Expect=2e-40]} {Smed: dd_Smed_v6_6478_0_1, dd_Smed_v6_6478_0_1, [RH, Score=204, Expect=2e-65]} {RNA1509_33915} {RNA1310_33819} {RNA815_10361.1}
13. MligTC455_21952 382 7.96 Mlig455_030974, Mlig455_069449

Neo: -

Age: Down-Up-Down

 0.957 - - - - - 0.957

Mlig455_030974 {REF} {Length: 5703} {Pfam: Tetratricopeptide repeat [PF07719.19, score=37.1]; Tetratricopeptide repeat [PF13428.8, score=32.3]; Tetratricopeptide repeat [PF14559.8, score=28.6]; Tetratricopeptide repeat [PF13181.8, score=27.7]; Tetratricopeptide repeat [PF00515.30, score=23.8]; Tetratricopeptide repeat [PF13176.8, score=20.6]} {RNA1509_6614} {RNA1310_3212} {RNA815_1655}

Mlig455_069449 {REF} {Length: 4564} {Pfam: Tetratricopeptide repeat [PF07719.19, score=38.1]; Tetratricopeptide repeat [PF14559.8, score=32.8]; Tetratricopeptide repeat [PF13428.8, score=30.9]; Tetratricopeptide repeat [PF13181.8, score=30.3]; Tetratricopeptide repeat [PF00515.30, score=25.2]; Tetratricopeptide repeat [PF13176.8, score=21.3]} {RNA1509_54886, RNA1509_57311, RNA1509_6614} {RNA1310_3212, RNA1509_54886, RNA1509_57311, RNA1509_6614} {RNA1509_54886, RNA1509_57311, RNA1509_6614, RNA815_1655}
14. MligTC455_28725 281 5.84 Mlig455_057062

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.361

Region-enriched R2: 3.359/0.00096

 ANK1 0.956 - - - - 0.956 - Mlig455_057062 {REF} {Length: 9594} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=657.0]; Ankyrin repeats (many copies) [PF13637.8, score=564.6]; Ankyrin repeats (many copies) [PF13857.8, score=451.3]; Ankyrin repeat [PF13606.8, score=367.3]; Ankyrin repeat [PF00023.32, score=184.4]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=148, Expect=9e-35]; ENSG00000145362, ANK2, ankyrin 2, [Score=147, Expect=1e-34]; ENSG00000151150, ANK3, ankyrin 3, [Score=146, Expect=4e-34]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=149, Expect=1e-35]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=149, Expect=4e-35]; ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=145, Expect=7e-34]; ENSMUSG00000014496, Ankrd28, ankyrin repeat domain 28, [Score=144, Expect=8e-34]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=149, Expect=5e-35]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=135, Expect=2e-31]} {Smed: dd_Smed_v6_5303_0_2, dd_Smed_v6_5303_0_2, [Score=172, Expect=3e-43]} {RNA1509_11517} {RNA1310_203} {RNA815_6981}
15. MligTC455_33563 304 6.34 Mlig455_003859, Mlig455_003860, Mlig455_006554, Mlig455_006555, Mlig455_016950, Mlig455_018481, Mlig455_018483, Mlig455_031341, Mlig455_031342, Mlig455_057217, Mlig455_065069, Mlig455_070194

Neo: -

Age: Down-Up-Down

 0.956 - - 0.956 - - -

Mlig455_003859 {REF} {Length: 1409} {TRANSSPLICED} {RNA1509_18509} {RNA1310_27667} {RNA815_14362}

Mlig455_003860 {REF} {Length: 1410} {TRANSSPLICED} {RNA1509_18509} {RNA1310_27667, RNA1509_18509} {RNA1509_18509, RNA815_14362}

Mlig455_006554 {REF} {Length: 1403} {TRANSSPLICED} {RNA1509_18509} {RNA1310_27667} {RNA815_14362}

Mlig455_006555 {REF} {Length: 1408} {TRANSSPLICED} {RNA1509_18509} {RNA1310_27667} {RNA815_14362}

Mlig455_016950 {REF} {Length: 1742} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=103.7]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=80.0]; Integrase zinc binding domain [PF17921.3, score=51.0]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=33.5]} {Mouse: ENSMUSG00000061186, Sfmbt2, Scm-like with four mbt domains 2, [Score=68.9, Expect=1e-11]} {Smed: dd_Smed_v6_15498_0_18, dd_Smed_v6_15498_0_18, [Score=99.0, Expect=2e-22]} {RNA1509_38544} {RNA1310_2645.1} {RNA815_16906}

Mlig455_018481 {REF} {Length: 6807} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=102.5]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=77.2]} {Mouse: ENSMUSG00000024246, Thumpd2, THUMP domain containing 2, [Score=55.8, Expect=1e-07]} {Smed: dd_Smed_v6_15498_0_18, dd_Smed_v6_15498_0_18, [Score=94.4, Expect=8e-21]} {RNA1509_18509} {RNA1310_27667} {RNA815_14362}

Mlig455_018483 {REF} {Length: 1402} {TRANSSPLICED} {RNA1509_18509} {RNA1310_27667} {RNA815_14362}

Mlig455_031341 {REF} {Length: 1404} {TRANSSPLICED} {RNA1509_18509} {RNA1310_27667} {RNA815_14362}

Mlig455_031342 {REF} {Length: 1404} {TRANSSPLICED} {RNA1509_18509} {RNA1310_27667} {RNA815_14362}

Mlig455_057217 {REF} {Length: 1399} {TRANSSPLICED} {RNA1509_18509} {RNA1310_27667} {RNA815_14362}

Mlig455_065069 {REF} {Length: 1404} {TRANSSPLICED} {RNA1509_18509} {RNA1310_27667} {RNA815_14362}

Mlig455_070194 {REF} {Length: 1194} {RNA1509_18509} {RNA1310_27667} {RNA815_14362}
16. MligTC455_30361 230 4.79 Mlig455_011042, Mlig455_029576, Mlig455_034158

Neo: -

Age: -

 0.953 - - - - 0.953 -

Mlig455_011042 {REF} {Length: 3198} {Pfam: Integrase core domain [PF00665.28, score=25.2]} {Smed: dd_Smed_v6_9908_0_3, dd_Smed_v6_9908_0_3, [Score=73.2, Expect=4e-15]} {RNA1509_14877} {RNA1310_22681.1} {RNA815_5959.1}

Mlig455_029576 {REF} {Length: 4732} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=47.1]} {Smed: dd_Smed_v6_15498_0_73, dd_Smed_v6_15498_0_73, [Score=63.2, Expect=2e-14]} {RNA1509_35014} {RNA1310_1636} {RNA815_5959.1}

Mlig455_034158 {REF} {Length: 898} {Pfam: Integrase core domain [PF00665.28, score=28.8]} {Smed: dd_Smed_v6_11155_0_5, dd_Smed_v6_11155_0_5, [Score=58.2, Expect=2e-11]} {RNA1509_14877} {RNA1310_22681.1} {RNA815_5959.1}
17. MligTC455_22098 31 0.66 Mlig455_004396, Mlig455_037219

Neo: -

Age: -

 0.952 - - 0.952 - - -

Mlig455_004396 {REF} {Length: 1521} {RNA1310_40784}

Mlig455_037219 {REF} {Length: 1583} {RNA1310_63625}
18. MligTC455_42050 59 1.22 Mlig455_001220

Neo: -

Age: -

 SLC12A8 0.951 - - - 0.951 - - Mlig455_001220 {REF} {Length: 3696} {TRANSSPLICED} {Pfam: Amino acid permease [PF00324.23, score=140.2]} {Human: ENSG00000221955, SLC12A8, solute carrier family 12 member 8, [RH, Score=323, Expect=1e-100]} {Mouse: ENSMUSG00000035506, Slc12a8, solute carrier family 12 (potassium/chloride transporters), member 8, [RH, Score=317, Expect=1e-98]} {Dmel: FBgn0024365, CG12773, [Score=417, Expect=2e-137]} {Celegans: WBGene00017350, F10E7.9, [RH, Score=337, Expect=6e-108]} {Smed: dd_Smed_v6_8108_0_1, dd_Smed_v6_8108_0_1, [RH, Score=427, Expect=9e-142]} {RNA1509_48906} {RNA1310_21016.1, RNA1509_48906} {RNA1509_48906, RNA815_8485}
19. MligTC455_30879 71 1.48 Mlig455_051449

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.777

 0.95 - - - 0.950 - - Mlig455_051449 {REF} {Length: 649} {TRANSSPLICED} {RNA1509_13351} {RNA1310_56244} {RNA815_28747.1}
20. MligTC455_51319 50 1.04 Mlig455_050267

Neo: -

Age: -

Region-enriched R4: 4.268/0.03200

 RAD51C 0.95 - - 0.950 - - - Mlig455_050267 {REF} {Length: 1379} {TRANSSPLICED} {Pfam: Rad51 [PF08423.13, score=138.4]; AAA domain [PF13481.8, score=35.5]; KaiC [PF06745.15, score=18.8]} {Human: ENSG00000108384, RAD51C, RAD51 paralog C, [RH, Score=179, Expect=3e-52]} {Mouse: ENSMUSG00000007646, Rad51c, RAD51 paralog C, [RH, Score=179, Expect=1e-52]} {Dmel: FBgn0003482, spn-D, spindle D, [RH, Score=110, Expect=1e-27]} {Celegans: WBGene00004297, rad-51, RAD51 short isoform; RecA/Rad51/Dmc1-like protein, [Score=70.5, Expect=3e-13]} {Smed: dd_Smed_v6_16724_0_2, dd_Smed_v6_16724_0_2, [RH, Score=183, Expect=3e-55]} {RNA1509_27617} {RNA1310_25633.1, RNA1509_27617} {RNA1509_27617, RNA815_20829}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA