Data search


search
Exact
Search

Results for MligTC455_31040

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_31040 82 1.72 Mlig455_052105

Neo: Int S/G2/M

Age: -

TYMS Mlig455_052105 {REF} {Length: 2862} {TRANSSPLICED} {Pfam: Thymidylate synthase [PF00303.21, score=130.5]} {Human: ENSG00000176890, TYMS, thymidylate synthetase, [Score=125, Expect=1e-36]} {Mouse: ENSMUSG00000025747, Tyms, thymidylate synthase, [Score=128, Expect=4e-37]} {Dmel: FBgn0024920, Ts, Thymidylate synthase, [Score=132, Expect=1e-38]} {Celegans: WBGene00022455, tyms-1, Thymidylate synthase, [Score=119, Expect=7e-34]} {Smed: dd_Smed_v6_1260_0_1, dd_Smed_v6_1260_0_1, [Score=129, Expect=2e-36]} {RNA1509_12188, RNA1509_25078, RNA1509_46409} {RNA1310_27381, RNA1509_25078, RNA1509_46409} {RNA1509_25078, RNA1509_46409, RNA815_12214.1}

Cumulative graph for MligTC455_31040

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.121 1.913 0.99962 1.00000
RegionR2 1.018 1.913 0.42981 0.82013
RegionR3 1.103 1.913 0.34070 0.87760
RegionR4 2.84 1.913 0.02825 0.13024
RegionR5 1.249 1.913 0.25863 0.57862
RegionR6 0.2 1.913 0.72048 1.00000
RegionR7 0.172 1.913 0.74757 1.00000
RegionR8 -4.462 1.913 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.216 1.913 0.99998 1.00000
RegenerationR2 0.303 1.913 0.68185 0.94953
RegenerationR3 1.143 1.913 0.17999 0.61602
RegenerationR4 1.042 1.913 0.26945 0.71605
RegenerationR5 1.977 1.913 0.00468 0.12396
RegenerationR6 1.75 1.913 0.08095 0.35537
RegenerationBL 1.907 1.913 0.36335 0.73184
RegenerationTP 2.276 1.913 0.32810 0.77261


Genes with expression patterns similar to MligTC455_31040

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_31040 82 1.72 Mlig455_052105

Neo: Int S/G2/M

Age: -

TYMS 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_052105 {REF} {Length: 2862} {TRANSSPLICED} {Pfam: Thymidylate synthase [PF00303.21, score=130.5]} {Human: ENSG00000176890, TYMS, thymidylate synthetase, [Score=125, Expect=1e-36]} {Mouse: ENSMUSG00000025747, Tyms, thymidylate synthase, [Score=128, Expect=4e-37]} {Dmel: FBgn0024920, Ts, Thymidylate synthase, [Score=132, Expect=1e-38]} {Celegans: WBGene00022455, tyms-1, Thymidylate synthase, [Score=119, Expect=7e-34]} {Smed: dd_Smed_v6_1260_0_1, dd_Smed_v6_1260_0_1, [Score=129, Expect=2e-36]} {RNA1509_12188, RNA1509_25078, RNA1509_46409} {RNA1310_27381, RNA1509_25078, RNA1509_46409} {RNA1509_25078, RNA1509_46409, RNA815_12214.1}
2. MligTC455_03965 112 2.34 Mlig455_010901

Neo: Int S/G2/M

Age: -

Region-enriched R4: 2.743/0.04091
Region-enriched R5: 2.635/0.01618

1.846 - - - 0.955 - 0.891 Mlig455_010901 {REF} {Length: 123} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9866} {RNA1310_23274} {RNA815_31280}
3. MligTC455_29283 58 1.2 Mlig455_030036

Neo: -

Age: logFC(26M/2M)=0.357

URGCP 1.827 - - - 0.854 0.973 - Mlig455_030036 {REF} {Length: 7780} {TRANSSPLICED} {Pfam: Root hair defective 3 GTP-binding protein (RHD3) [PF05879.14, score=25.8]; Dynamin family [PF00350.25, score=21.3]; 50S ribosome-binding GTPase [PF01926.25, score=19.3]; Guanylate-binding protein, N-terminal domain [PF02263.21, score=19.0]} {Human: ENSG00000106608, URGCP, upregulator of cell proliferation, [Score=123, Expect=2e-27]} {Mouse: ENSMUSG00000078606, Gm4070, predicted gene 4070, [RH, Score=523, Expect=5e-153]; ENSMUSG00000045868, Gvin1, GTPase, very large interferon inducible 1, [RH, Score=521, Expect=2e-152]} {RNA1509_16396, RNA1509_46736, RNA1509_52232} {RNA1310_766.1, RNA1509_46736, RNA1509_52232} {RNA1509_46736, RNA1509_52232, RNA815_2094.1}
4. MligTC455_43555 488 10.16 Mlig455_019847

Neo: -

Age: logFC(26M/2M)=0.284

Region-enriched R5: 1.886/0.00001
Region-enriched R4: 1.842/0.00087

CHPT1 1.798 - - - 0.841 - 0.957 Mlig455_019847 {REF} {Length: 2872} {TRANSSPLICED} {Pfam: CDP-alcohol phosphatidyltransferase [PF01066.23, score=64.6]} {Human: ENSG00000111666, CHPT1, choline phosphotransferase 1, [RH, Score=291, Expect=4e-95]; ENSG00000134255, CEPT1, choline/ethanolamine phosphotransferase 1, [RH, Score=285, Expect=1e-92]} {Mouse: ENSMUSG00000040774, Cept1, choline/ethanolaminephosphotransferase 1, [RH, Score=285, Expect=1e-92]; ENSMUSG00000060002, Chpt1, choline phosphotransferase 1, [RH, Score=281, Expect=2e-91]} {Dmel: FBgn0033844, bbc, bb in a boxcar, [RH, Score=276, Expect=4e-89]} {Celegans: WBGene00013024, cept-2, Choline/EthanolaminePhosphoTransferase, [RH, Score=268, Expect=3e-86]} {Smed: dd_Smed_v6_7722_0_1, dd_Smed_v6_7722_0_1, [RH, Score=315, Expect=9e-105]} {RNA1509_16795, RNA1509_26545, RNA1509_45062, RNA1509_9172} {RNA1310_15705, RNA1509_16795, RNA1509_26545, RNA1509_45062} {RNA1509_16795, RNA1509_26545, RNA1509_45062, RNA815_5861}
5. MligTC455_50965 454 9.45 Mlig455_029740

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.564

Region-enriched R5: 2.031/0.00400
Region-enriched R4: 1.965/0.04603

NOL12 1.788 - - - 0.956 - 0.832 Mlig455_029740 {REF} {Length: 703} {TRANSSPLICED} {Pfam: Nucleolar protein 12 (25kDa) [PF09805.11, score=49.7]} {Human: ENSG00000273899, NOL12, nucleolar protein 12, [RH, Score=62.4, Expect=6e-12]; ENSG00000100101, Z83844.1, novel transcript, [RH, Score=61.6, Expect=9e-12]} {Mouse: ENSMUSG00000033099, Nol12, nucleolar protein 12, [RH, Score=59.7, Expect=4e-11]} {RNA1509_49191} {RNA1310_51251, RNA1509_49191} {RNA1509_49191, RNA815_24269}
6. MligTC455_46510 48 0.99 Mlig455_023192

Neo: -

Age: -

ANGPTL3 1.748 - - - 0.777 0.971 - Mlig455_023192 {REF} {Length: 2070} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=60.4]; PAN domain [PF14295.8, score=24.4]} {Human: ENSG00000132855, ANGPTL3, angiopoietin like 3, [Score=58.2, Expect=1e-08]} {Mouse: ENSMUSG00000028553, Angptl3, angiopoietin-like 3, [Score=48.9, Expect=7e-06]; ENSMUSG00000002289, Angptl4, angiopoietin-like 4, [Score=48.9, Expect=6e-06]; ENSMUSG00000022309, Angpt1, angiopoietin 1, [Score=48.5, Expect=1e-05]} {Dmel: FBgn0031804, CG9500, [Score=70.5, Expect=2e-13]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=50.8, Expect=8e-07]} {RNA1509_53291} {RNA1310_30694.1} {RNA815_9881}
7. MligTC455_30610 388 8.09 Mlig455_000964, Mlig455_045734

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.317

1.72 0.754 - - - 0.966 -

Mlig455_000964 {REF} {Length: 1758} {TRANSSPLICED} {Pfam: Ribonuclease P/MRP, subunit p29 [PF01868.18, score=55.7]} {Dmel: FBgn0035831, CG8038, [RH, Score=80.1, Expect=8e-18]} {Celegans: WBGene00007603, C15C6.4, [RH, Score=57.4, Expect=9e-10]} {Smed: dd_Smed_v6_10916_0_1, dd_Smed_v6_10916_0_1, [RH, Score=49.7, Expect=3e-07]} {RNA1509_32013, RNA1509_57414} {RNA1310_34061.2, RNA1509_32013} {RNA1509_32013, RNA815_13743}

Mlig455_045734 {REF} {Length: 1545} {TRANSSPLICED} {Pfam: Ribonuclease P/MRP, subunit p29 [PF01868.18, score=55.8]} {Dmel: FBgn0035831, CG8038, [RH, Score=80.1, Expect=7e-18]} {Celegans: WBGene00007603, C15C6.4, [RH, Score=59.3, Expect=2e-10]} {Smed: dd_Smed_v6_10916_0_1, dd_Smed_v6_10916_0_1, [RH, Score=49.7, Expect=3e-07]} {RNA1509_57414} {RNA1310_34061.2, RNA1509_57414} {RNA1509_57414, RNA815_13743}
8. MligTC455_17208 1164 24.25 Mlig455_008897, Mlig455_008996, Mlig455_016536, Mlig455_016591

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.297

1.708 - - - 0.956 - 0.752

Mlig455_008897 {REF} {Length: 410} {Smed: dd_Smed_v6_391_0_1, dd_Smed_v6_391_0_1, [Score=74.7, Expect=1e-19]} {RNA1509_24994} {RNA1310_42798} {RNA815_35870}

Mlig455_008996 {REF} {Length: 2738} {Smed: dd_Smed_v6_391_0_1, dd_Smed_v6_391_0_1, [Score=74.7, Expect=1e-19]} {RNA1509_24994} {RNA1310_42798} {RNA815_35870}

Mlig455_016536 {REF} {Length: 1008} {Smed: dd_Smed_v6_391_0_1, dd_Smed_v6_391_0_1, [Score=53.1, Expect=2e-11]} {RNA1509_24994} {RNA1310_42798} {RNA815_35870}

Mlig455_016591 {REF} {Length: 994} {Smed: dd_Smed_v6_391_0_1, dd_Smed_v6_391_0_1, [Score=74.7, Expect=1e-19]} {RNA1509_24994} {RNA1310_42798} {RNA815_35870}
9. MligTC455_23593 92 1.91 Mlig455_021623

Neo: -

Age: Up-Down-Down

FMNL1 1.659 - - - 0.955 - 0.704 Mlig455_021623 {REF} {Length: 5669} {TRANSSPLICED} {Pfam: Formin Homology 2 Domain [PF02181.25, score=260.2]; Diaphanous GTPase-binding Domain [PF06371.15, score=67.9]; Diaphanous FH3 Domain [PF06367.18, score=54.5]} {Human: ENSG00000184922, FMNL1, formin like 1, [RH, Score=295, Expect=4e-87]} {Mouse: ENSMUSG00000036053, Fmnl2, formin-like 2, [RH, Score=380, Expect=9e-115]} {Dmel: FBgn0267795, Frl, Formin-like, [RH, Score=448, Expect=1e-138]} {Celegans: WBGene00021698, frl-1, FRL (Formin Related gene in Leukocytes) homolog, [Score=184, Expect=2e-47]} {Smed: dd_Smed_v6_3917_0_1, dd_Smed_v6_3917_0_1, [Score=379, Expect=1e-113]} {RNA1509_11550} {RNA1310_16466, RNA1509_11550} {RNA1509_11550, RNA815_10742}
10. MligTC455_15666 475 9.89 Mlig455_059136

Neo: -

Age: Down-Down-Up

FICD 1.658 - - - 0.701 - 0.957 Mlig455_059136 {REF} {Length: 2075} {TRANSSPLICED} {Pfam: Evolutionarily conserved signalling intermediate in Toll pathway [PF06239.13, score=180.7]; Fic/DOC family [PF02661.20, score=83.3]; C-terminal domain of the ECSIT protein [PF14784.8, score=42.0]; Tetratricopeptide repeat [PF07719.19, score=21.7]; Tetratricopeptide repeat [PF13432.8, score=20.3]; Tetratricopeptide repeat [PF13428.8, score=20.0]} {Human: ENSG00000198855, FICD, FIC domain containing, [RH, Score=351, Expect=6e-110]} {Mouse: ENSMUSG00000053334, Ficd, FIC domain containing, [RH, Score=341, Expect=2e-106]} {Dmel: FBgn0263278, Fic, Fic domain-containing protein, [RH, Score=333, Expect=6e-103]} {Celegans: WBGene00014004, fic-1, Adenosine monophosphate-protein transferase FICD homolog, [RH, Score=304, Expect=3e-92]} {Smed: dd_Smed_v6_7501_0_1, dd_Smed_v6_7501_0_1, [RH, Score=416, Expect=3e-135]} {RNA1509_26908} {RNA1310_13470, RNA1509_26908} {RNA1509_26908, RNA815_13748}
11. MligTC455_26021 68 1.41 Mlig455_026969, Mlig455_030729

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.388

0.974 - - - - 0.974 -

Mlig455_026969 {REF} {Length: 2311} {TRANSSPLICED} {Pfam: Beta-lactamase superfamily domain [PF12706.9, score=27.5]} {Smed: dd_Smed_v6_9268_0_1, dd_Smed_v6_9268_0_1, [RH, Score=162, Expect=3e-47]} {RNA1509_51505} {RNA1310_13475, RNA1509_51505} {RNA1509_51505, RNA815_8908}

Mlig455_030729 {REF} {Length: 2308} {TRANSSPLICED} {Pfam: Beta-lactamase superfamily domain [PF12706.9, score=27.5]} {Smed: dd_Smed_v6_9268_0_1, dd_Smed_v6_9268_0_1, [RH, Score=162, Expect=3e-47]} {RNA1509_18012} {RNA1310_13475, RNA1509_18012} {RNA1509_18012, RNA815_8908}
12. MligTC455_06500 15 0.31 Mlig455_025797

Neo: -

Age: -

0.973 - - - - 0.973 - Mlig455_025797 {REF} {Length: 1697} {NoTransDecoderORF} {RNA1509_54874} {RNA1310_106012}
13. MligTC455_18253 432 8.99 Mlig455_047965

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 3.489

Region-enriched R4: 1.868/0.00919

GLMN 0.961 - - - - - 0.961 Mlig455_047965 {REF} {Length: 2789} {TRANSSPLICED} {Pfam: Uncharacterised protein family, YAP/Alf4/glomulin [PF08568.12, score=65.3]} {Human: ENSG00000174842, GLMN, glomulin, FKBP associated protein, [RH, Score=97.8, Expect=8e-21]} {Mouse: ENSMUSG00000029276, Glmn, glomulin, FKBP associated protein, [RH, Score=109, Expect=1e-24]} {Dmel: FBgn0050496, CG30496, [RH, Score=67.0, Expect=3e-11]} {Smed: dd_Smed_v6_9392_0_1, dd_Smed_v6_9392_0_1, [Score=68.9, Expect=3e-12]} {RNA1509_10083, RNA1509_27340, RNA1509_41762, RNA1509_46743, RNA1509_51960} {RNA1310_12822.1, RNA1509_10083, RNA1509_27340, RNA1509_41762, RNA1509_46743, RNA1509_51960} {RNA1509_10083, RNA1509_27340, RNA1509_41762, RNA1509_46743, RNA1509_51960, RNA815_2989.1}
14. MligTC455_25982 516 10.74 Mlig455_025870, Mlig455_025929, Mlig455_025961

Neo: -

Age: -

FAAH 0.958 - - - - - 0.958

Mlig455_025870 {REF} {Length: 2750} {TRANSSPLICED} {Pfam: Amidase [PF01425.23, score=276.7]; Neprosin activation peptide [PF14365.8, score=21.8]} {Human: ENSG00000117480, FAAH, fatty acid amide hydrolase, [Score=258, Expect=7e-78]} {Mouse: ENSMUSG00000034171, Faah, fatty acid amide hydrolase, [Score=270, Expect=2e-82]} {Dmel: FBgn0037547, CG7910, [Score=102, Expect=1e-22]} {Celegans: WBGene00019068, faah-3, Fatty Acid Amide Hydrolase homolog, [Score=263, Expect=4e-80]} {Smed: dd_Smed_v6_4700_0_1, dd_Smed_v6_4700_0_1, [Score=357, Expect=2e-116]} {RNA1509_48278} {RNA1310_19307.2} {RNA815_14191}

Mlig455_025929 {REF} {Length: 3301} {Pfam: Amidase [PF01425.23, score=270.8]; Neprosin activation peptide [PF14365.8, score=23.3]} {Human: ENSG00000117480, FAAH, fatty acid amide hydrolase, [Score=255, Expect=4e-75]} {Mouse: ENSMUSG00000034171, Faah, fatty acid amide hydrolase, [Score=267, Expect=1e-79]} {Dmel: FBgn0037547, CG7910, [Score=95.9, Expect=2e-20]} {Celegans: WBGene00019068, faah-3, Fatty Acid Amide Hydrolase homolog, [Score=255, Expect=2e-75]} {Smed: dd_Smed_v6_4700_0_1, dd_Smed_v6_4700_0_1, [Score=351, Expect=7e-112]} {RNA1509_48278} {RNA1310_19307.2, RNA1509_48278} {RNA1509_48278, RNA815_14191}

Mlig455_025961 {REF} {Length: 4458} {TRANSSPLICED} {Pfam: Amidase [PF01425.23, score=547.8]; Neprosin activation peptide [PF14365.8, score=40.2]} {Human: ENSG00000117480, FAAH, fatty acid amide hydrolase, [Score=259, Expect=2e-74]} {Mouse: ENSMUSG00000034171, Faah, fatty acid amide hydrolase, [Score=271, Expect=1e-78]} {Dmel: FBgn0037547, CG7910, [Score=103, Expect=1e-22]} {Celegans: WBGene00019068, faah-3, Fatty Acid Amide Hydrolase homolog, [Score=263, Expect=3e-76]} {Smed: dd_Smed_v6_4700_0_1, dd_Smed_v6_4700_0_1, [Score=358, Expect=6e-111]} {RNA1509_48278} {RNA1310_19307.2} {RNA815_24599}
15. MligTC455_19378 206 4.29 Mlig455_016205

Neo: -

Age: -

MFSD4B 0.951 - - - 0.951 - - Mlig455_016205 {REF} {Length: 2626} {Pfam: Major Facilitator Superfamily [PF07690.18, score=19.1]} {Human: ENSG00000173214, MFSD4B, major facilitator superfamily domain containing 4B, [Score=56.6, Expect=6e-08]} {Mouse: ENSMUSG00000038522, Mfsd4b1, major facilitator superfamily domain containing 4B1, [Score=76.3, Expect=2e-14]} {Smed: dd_Smed_v6_8337_0_1, dd_Smed_v6_8337_0_1, [Score=55.8, Expect=3e-08]} {RNA1509_26810} {RNA1310_14671.1} {RNA815_5980}
16. MligTC455_34160 857 17.85 Mlig455_018145

Neo: -

Age: logFC(26M/2M)=0.419

Region-enriched R4: 1.468/0.00145
Region-enriched R5: 1.286/0.00045

SLC31A1 0.95 - - - 0.950 - - Mlig455_018145 {REF} {Length: 4083} {TRANSSPLICED} {Pfam: Ctr copper transporter family [PF04145.17, score=102.1]} {Human: ENSG00000136868, SLC31A1, solute carrier family 31 member 1, [RH, Score=119, Expect=2e-33]} {Mouse: ENSMUSG00000066150, Slc31a1, solute carrier family 31, member 1, [RH, Score=118, Expect=2e-33]} {Dmel: FBgn0062413, Ctr1A, Copper transporter 1A, [RH, Score=120, Expect=4e-34]} {Celegans: WBGene00010274, F58G6.3, [RH, Score=86.7, Expect=5e-22]} {Smed: dd_Smed_v6_5954_0_1, dd_Smed_v6_5954_0_1, [RH, Score=112, Expect=2e-31]} {RNA1509_44097, RNA1509_46905, RNA1509_58138, RNA1509_58880} {RNA1310_35509, RNA1509_44097, RNA1509_46905, RNA1509_58138, RNA1509_58880} {RNA1509_44097, RNA1509_46905, RNA1509_58138, RNA1509_58880, RNA815_4189.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA