TomoSeq data search

Data search

Results for MligTC455_26021

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_26021

68

1.41

Mlig455_026969, Mlig455_030729

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.388

Mlig455_026969 {REF} {Length: 2311} {TRANSSPLICED} {Pfam: Beta-lactamase superfamily domain [PF12706.9, score=27.5]} {Smed: dd_Smed_v6_9268_0_1, dd_Smed_v6_9268_0_1, [RH, Score=162, Expect=3e-47]} {RNA1509_51505} {RNA1310_13475, RNA1509_51505} {RNA1509_51505, RNA815_8908}

Mlig455_030729 {REF} {Length: 2308} {TRANSSPLICED} {Pfam: Beta-lactamase superfamily domain [PF12706.9, score=27.5]} {Smed: dd_Smed_v6_9268_0_1, dd_Smed_v6_9268_0_1, [RH, Score=162, Expect=3e-47]} {RNA1509_18012} {RNA1310_13475, RNA1509_18012} {RNA1509_18012, RNA815_8908}

Cumulative graph for MligTC455_26021

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-8.826	1.792	0.99963	1.00000
RegionR2	3.952	1.792	0.01082	0.10584
RegionR3	3.147	1.792	0.00677	0.11711
RegionR4	-0.789	1.792	0.91890	1.00000
RegionR5	1.683	1.792	0.18174	0.45942
RegionR6	2.213	1.792	0.09866	0.57731
RegionR7	2.011	1.792	0.16208	0.74369
RegionR8	-3.391	1.792	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	5.319	1.792	1.00000	1.00000
RegenerationR2	-0.574	1.792	0.58800	0.91028
RegenerationR3	0.503	1.792	0.58228	0.89985
RegenerationR4	1.397	1.792	0.18153	0.62191
RegenerationR5	0.945	1.792	0.26451	0.69616
RegenerationR6	-0.484	1.792	0.69293	0.92059
RegenerationBL	-1.47	1.792	1.00000	1.00000
RegenerationTP	3.252	1.792	0.17634	0.61034

Genes with expression patterns similar to MligTC455_26021

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_26021	68	1.41	Mlig455_026969, Mlig455_030729	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.388		4	1.000	1.000	-	-	1.000	1.000	Mlig455_026969 {REF} {Length: 2311} {TRANSSPLICED} {Pfam: Beta-lactamase superfamily domain [PF12706.9, score=27.5]} {Smed: dd_Smed_v6_9268_0_1, dd_Smed_v6_9268_0_1, [RH, Score=162, Expect=3e-47]} {RNA1509_51505} {RNA1310_13475, RNA1509_51505} {RNA1509_51505, RNA815_8908} Mlig455_030729 {REF} {Length: 2308} {TRANSSPLICED} {Pfam: Beta-lactamase superfamily domain [PF12706.9, score=27.5]} {Smed: dd_Smed_v6_9268_0_1, dd_Smed_v6_9268_0_1, [RH, Score=162, Expect=3e-47]} {RNA1509_18012} {RNA1310_13475, RNA1509_18012} {RNA1509_18012, RNA815_8908}
2.	MligTC455_26303	67	1.39	Mlig455_041962	Neo: - Age: -		1.698	0.748	-	-	-	0.950	-	Mlig455_041962 {REF} {Length: 3043} {TRANSSPLICED} {Pfam: Soluble NSF attachment protein, SNAP [PF14938.8, score=316.3]; Tetratricopeptide repeat [PF13424.8, score=30.1]} {Dmel: FBgn0250791, alphaSnap, alpha Soluble NSF attachment protein, [Score=56.2, Expect=3e-08]} {Celegans: WBGene00017016, snap-1, SNAP (Soluble NSF Attachment Protein) homolog, [Score=125, Expect=5e-32]} {Smed: dd_Smed_v6_2480_0_1, dd_Smed_v6_2480_0_1, [Score=107, Expect=1e-25]} {RNA1509_30138} {RNA1310_16406} {RNA815_18403}
3.	MligTC455_29283	58	1.2	Mlig455_030036	Neo: - Age: logFC(26M/2M)=0.357	URGCP	0.984	-	-	-	-	0.984	-	Mlig455_030036 {REF} {Length: 7780} {TRANSSPLICED} {Pfam: Root hair defective 3 GTP-binding protein (RHD3) [PF05879.14, score=25.8]; Dynamin family [PF00350.25, score=21.3]; 50S ribosome-binding GTPase [PF01926.25, score=19.3]; Guanylate-binding protein, N-terminal domain [PF02263.21, score=19.0]} {Human: ENSG00000106608, URGCP, upregulator of cell proliferation, [Score=123, Expect=2e-27]} {Mouse: ENSMUSG00000078606, Gm4070, predicted gene 4070, [RH, Score=523, Expect=5e-153]; ENSMUSG00000045868, Gvin1, GTPase, very large interferon inducible 1, [RH, Score=521, Expect=2e-152]} {RNA1509_16396, RNA1509_46736, RNA1509_52232} {RNA1310_766.1, RNA1509_46736, RNA1509_52232} {RNA1509_46736, RNA1509_52232, RNA815_2094.1}
4.	MligTC455_31040	82	1.72	Mlig455_052105	Neo: Int S/G2/M Age: -	TYMS	0.974	-	-	-	-	0.974	-	Mlig455_052105 {REF} {Length: 2862} {TRANSSPLICED} {Pfam: Thymidylate synthase [PF00303.21, score=130.5]} {Human: ENSG00000176890, TYMS, thymidylate synthetase, [Score=125, Expect=1e-36]} {Mouse: ENSMUSG00000025747, Tyms, thymidylate synthase, [Score=128, Expect=4e-37]} {Dmel: FBgn0024920, Ts, Thymidylate synthase, [Score=132, Expect=1e-38]} {Celegans: WBGene00022455, tyms-1, Thymidylate synthase, [Score=119, Expect=7e-34]} {Smed: dd_Smed_v6_1260_0_1, dd_Smed_v6_1260_0_1, [Score=129, Expect=2e-36]} {RNA1509_12188, RNA1509_25078, RNA1509_46409} {RNA1310_27381, RNA1509_25078, RNA1509_46409} {RNA1509_25078, RNA1509_46409, RNA815_12214.1}
5.	MligTC455_42665	67	1.39	Mlig455_043259	Neo: - Age: -		0.963	-	-	-	-	-	0.963	Mlig455_043259 {REF} {Length: 3666} {TRANSSPLICED} {RNA1509_19907} {RNA1310_11028} {RNA815_16751}
6.	MligTC455_43858	19	0.39	Mlig455_018073	Neo: - Age: -		0.961	-	-	-	-	0.961	-	Mlig455_018073 {REF} {Length: 2715} {RNA1310_96909}
7.	MligTC455_30610	388	8.09	Mlig455_000964, Mlig455_045734	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.317		0.959	-	-	-	-	0.959	-	Mlig455_000964 {REF} {Length: 1758} {TRANSSPLICED} {Pfam: Ribonuclease P/MRP, subunit p29 [PF01868.18, score=55.7]} {Dmel: FBgn0035831, CG8038, [RH, Score=80.1, Expect=8e-18]} {Celegans: WBGene00007603, C15C6.4, [RH, Score=57.4, Expect=9e-10]} {Smed: dd_Smed_v6_10916_0_1, dd_Smed_v6_10916_0_1, [RH, Score=49.7, Expect=3e-07]} {RNA1509_32013, RNA1509_57414} {RNA1310_34061.2, RNA1509_32013} {RNA1509_32013, RNA815_13743} Mlig455_045734 {REF} {Length: 1545} {TRANSSPLICED} {Pfam: Ribonuclease P/MRP, subunit p29 [PF01868.18, score=55.8]} {Dmel: FBgn0035831, CG8038, [RH, Score=80.1, Expect=7e-18]} {Celegans: WBGene00007603, C15C6.4, [RH, Score=59.3, Expect=2e-10]} {Smed: dd_Smed_v6_10916_0_1, dd_Smed_v6_10916_0_1, [RH, Score=49.7, Expect=3e-07]} {RNA1509_57414} {RNA1310_34061.2, RNA1509_57414} {RNA1509_57414, RNA815_13743}
8.	MligTC455_40688	91	1.89	Mlig455_058234	Neo: - Age: Up-Down-Down		0.959	-	-	-	-	0.959	-	Mlig455_058234 {REF} {Length: 2364} {RNA1310_50800} {RNA815_40527}

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