M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_29283

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_29283 58 1.20 Mlig455_030036

Neo: -

Age: logFC(26M/2M)=0.357

 URGCP Mlig455_030036 {REF} {Length: 7780} {TRANSSPLICED} {Pfam: Root hair defective 3 GTP-binding protein (RHD3) [PF05879.14, score=25.8]; Dynamin family [PF00350.25, score=21.3]; 50S ribosome-binding GTPase [PF01926.25, score=19.3]; Guanylate-binding protein, N-terminal domain [PF02263.21, score=19.0]} {Human: ENSG00000106608, URGCP, upregulator of cell proliferation, [Score=123, Expect=2e-27]} {Mouse: ENSMUSG00000078606, Gm4070, predicted gene 4070, [RH, Score=523, Expect=5e-153]; ENSMUSG00000045868, Gvin1, GTPase, very large interferon inducible 1, [RH, Score=521, Expect=2e-152]} {RNA1509_16396, RNA1509_46736, RNA1509_52232} {RNA1310_766.1, RNA1509_46736, RNA1509_52232} {RNA1509_46736, RNA1509_52232, RNA815_2094.1}

Cumulative graph for MligTC455_29283

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.31 1.452 0.99994 1.00000
RegionR2 -1.354 1.452 0.99986 1.00000
RegionR3 0.418 1.452 0.99995 1.00000
RegionR4 2.198 1.452 0.99990 1.00000
RegionR5 1.456 1.452 0.99988 1.00000
RegionR6 0.559 1.452 0.99994 1.00000
RegionR7 -0.317 1.452 1.00000 1.00000
RegionR8 -0.649 1.452 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.281 1.452 0.99996 1.00000
RegenerationR2 3.317 1.452 0.02036 0.23442
RegenerationR3 4.102 1.452 0.00950 0.17817
RegenerationR4 4.16 1.452 0.00393 0.08586
RegenerationR5 4.005 1.452 0.00357 0.10626
RegenerationR6 4.384 1.452 0.01519 0.15199
RegenerationBL 3.323 1.452 0.09907 0.36993
RegenerationTP 2.42 1.452 0.39791 0.82766


Genes with expression patterns similar to MligTC455_29283

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_29283 58 1.2 Mlig455_030036

Neo: -

Age: logFC(26M/2M)=0.357

 URGCP 3 - - - 1.000 1.000 1.000 Mlig455_030036 {REF} {Length: 7780} {TRANSSPLICED} {Pfam: Root hair defective 3 GTP-binding protein (RHD3) [PF05879.14, score=25.8]; Dynamin family [PF00350.25, score=21.3]; 50S ribosome-binding GTPase [PF01926.25, score=19.3]; Guanylate-binding protein, N-terminal domain [PF02263.21, score=19.0]} {Human: ENSG00000106608, URGCP, upregulator of cell proliferation, [Score=123, Expect=2e-27]} {Mouse: ENSMUSG00000078606, Gm4070, predicted gene 4070, [RH, Score=523, Expect=5e-153]; ENSMUSG00000045868, Gvin1, GTPase, very large interferon inducible 1, [RH, Score=521, Expect=2e-152]} {RNA1509_16396, RNA1509_46736, RNA1509_52232} {RNA1310_766.1, RNA1509_46736, RNA1509_52232} {RNA1509_46736, RNA1509_52232, RNA815_2094.1}
2. MligTC455_31040 82 1.72 Mlig455_052105

Neo: Int S/G2/M

Age: -

 TYMS 1.827 - - - 0.854 0.973 - Mlig455_052105 {REF} {Length: 2862} {TRANSSPLICED} {Pfam: Thymidylate synthase [PF00303.21, score=130.5]} {Human: ENSG00000176890, TYMS, thymidylate synthetase, [Score=125, Expect=1e-36]} {Mouse: ENSMUSG00000025747, Tyms, thymidylate synthase, [Score=128, Expect=4e-37]} {Dmel: FBgn0024920, Ts, Thymidylate synthase, [Score=132, Expect=1e-38]} {Celegans: WBGene00022455, tyms-1, Thymidylate synthase, [Score=119, Expect=7e-34]} {Smed: dd_Smed_v6_1260_0_1, dd_Smed_v6_1260_0_1, [Score=129, Expect=2e-36]} {RNA1509_12188, RNA1509_25078, RNA1509_46409} {RNA1310_27381, RNA1509_25078, RNA1509_46409} {RNA1509_25078, RNA1509_46409, RNA815_12214.1}
3. MligTC455_47202 347 7.23 Mlig455_067347

Neo: -

Age: -

 1.693 - - - 0.976 - 0.717 Mlig455_067347 {REF} {Length: 3673} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=78.5]; C2H2 type zinc-finger (2 copies) [PF12756.9, score=26.9]; C2H2-type zinc finger [PF13894.8, score=21.6]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=21.2]} {Dmel: FBgn0028979, tio, tiptop, [RH, Score=75.1, Expect=3e-13]} {Smed: dd_Smed_v6_9287_0_1, dd_Smed_v6_9287_0_1, [Score=131, Expect=9e-31]} {RNA1509_33943} {RNA1310_12382} {RNA815_29092}
4. MligTC455_26021 68 1.41 Mlig455_026969, Mlig455_030729

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.388

 0.984 - - - - 0.984 -

Mlig455_026969 {REF} {Length: 2311} {TRANSSPLICED} {Pfam: Beta-lactamase superfamily domain [PF12706.9, score=27.5]} {Smed: dd_Smed_v6_9268_0_1, dd_Smed_v6_9268_0_1, [RH, Score=162, Expect=3e-47]} {RNA1509_51505} {RNA1310_13475, RNA1509_51505} {RNA1509_51505, RNA815_8908}

Mlig455_030729 {REF} {Length: 2308} {TRANSSPLICED} {Pfam: Beta-lactamase superfamily domain [PF12706.9, score=27.5]} {Smed: dd_Smed_v6_9268_0_1, dd_Smed_v6_9268_0_1, [RH, Score=162, Expect=3e-47]} {RNA1509_18012} {RNA1310_13475, RNA1509_18012} {RNA1509_18012, RNA815_8908}
5. MligTC455_49603 1482 30.87 Mlig455_055507

Neo: -

Age: logFC(26M/2M)=0.262

Region-enriched R5: 1.352/0.00007
Region-enriched R6: 1.058/0.04057

 AP2M1 0.974 - - - 0.974 - - Mlig455_055507 {REF} {Length: 2396} {TRANSSPLICED} {Pfam: Adaptor complexes medium subunit family [PF00928.23, score=270.9]; Clathrin adaptor complex small chain [PF01217.22, score=25.4]} {Human: ENSG00000161203, AP2M1, adaptor related protein complex 2 subunit mu 1, [RH, Score=769, Expect=0.0]} {Mouse: ENSMUSG00000022841, Ap2m1, adaptor-related protein complex 2, mu 1 subunit, [RH, Score=769, Expect=0.0]} {Dmel: FBgn0263351, AP-2mu, Adaptor Protein complex 2, mu subunit, [RH, Score=773, Expect=0.0]} {Celegans: WBGene00001082, dpy-23, AP-2 complex subunit mu, [RH, Score=740, Expect=0.0]} {Smed: dd_Smed_v6_1271_0_1, dd_Smed_v6_1271_0_1, [RH, Score=749, Expect=0.0]} {RNA1509_13945, RNA1509_3089} {RNA1310_7827, RNA1509_13945} {RNA1509_13945, RNA815_3295.2}
6. MligTC455_42717 521 10.86 Mlig455_045470

Neo: -

Age: -

Region-enriched R5: 2.099/0.00000
Region-enriched R4: 1.873/0.00362

 NUDT6 0.968 - - - 0.968 - - Mlig455_045470 {REF} {Length: 1932} {TRANSSPLICED} {Pfam: NUDIX domain [PF00293.30, score=61.2]} {Human: ENSG00000170917, NUDT6, nudix hydrolase 6, [Score=75.1, Expect=5e-15]} {Mouse: ENSMUSG00000050174, Nudt6, nudix (nucleoside diphosphate linked moiety X)-type motif 6, [Score=81.3, Expect=2e-17]} {Dmel: FBgn0030668, CG8128, [Score=97.8, Expect=2e-23]} {Celegans: WBGene00003578, ndx-1, Putative nudix hydrolase 1, [Score=47.4, Expect=5e-06]} {Smed: dd_Smed_v6_14055_0_1, dd_Smed_v6_14055_0_1, [Score=77.0, Expect=2e-16]} {RNA1509_35940, RNA1509_56356} {RNA1310_40847, RNA1509_35940, RNA1509_56356} {RNA1509_35940, RNA1509_56356, RNA815_14916}
7. MligTC455_49602 1675 34.9 Mlig455_055487

Neo: -

Age: -

Region-enriched R5: 1.345/0.00001
Region-enriched R6: 1.039/0.02038

 AP2M1 0.967 - - - 0.967 - - Mlig455_055487 {REF} {Length: 2404} {TRANSSPLICED} {Pfam: Adaptor complexes medium subunit family [PF00928.23, score=270.9]; Clathrin adaptor complex small chain [PF01217.22, score=25.4]} {Human: ENSG00000161203, AP2M1, adaptor related protein complex 2 subunit mu 1, [RH, Score=769, Expect=0.0]} {Mouse: ENSMUSG00000022841, Ap2m1, adaptor-related protein complex 2, mu 1 subunit, [RH, Score=769, Expect=0.0]} {Dmel: FBgn0263351, AP-2mu, Adaptor Protein complex 2, mu subunit, [RH, Score=773, Expect=0.0]} {Celegans: WBGene00001082, dpy-23, AP-2 complex subunit mu, [RH, Score=740, Expect=0.0]} {Smed: dd_Smed_v6_1271_0_1, dd_Smed_v6_1271_0_1, [RH, Score=749, Expect=0.0]} {RNA1509_3089} {RNA1310_7827, RNA1509_3089} {RNA1509_3089, RNA815_3295.2}
8. MligTC455_23303 7587 158.05 Mlig455_001441

Neo: Neoblast

Age: Down-Up-Up, logFC(26M/2M)=0.250

 SUB1 0.964 - - - 0.964 - - Mlig455_001441 {REF} {Length: 687} {TRANSSPLICED} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=56.6]} {Human: ENSG00000113387, SUB1, SUB1 homolog, transcriptional regulator, [RH, Score=52.8, Expect=2e-09]} {Mouse: ENSMUSG00000022205, Sub1, SUB1 homolog (S. cerevisiae), [RH, Score=57.0, Expect=3e-11]} {Dmel: FBgn0015299, Ssb-c31a, Single stranded-binding protein c31A, [RH, Score=43.9, Expect=2e-06]} {Celegans: WBGene00011743, T13F2.2, Putative RNA polymerase II transcriptional coactivator, [RH, Score=48.5, Expect=3e-08]} {Smed: dd_Smed_v6_976_0_1, dd_Smed_v6_976_0_1, [RH, Score=49.7, Expect=5e-09]} {RNA1509_1362, RNA1509_6003, RNA1509_6970} {RNA1310_8431, RNA1509_6003, RNA1509_6970} {RNA1509_6003, RNA1509_6970, RNA815_9739.1}
9. MligTC455_43886 983 20.48 Mlig455_014375

Neo: -

Age: logFC(26M/2M)=0.309

 WDR11 0.964 - - - 0.964 - - Mlig455_014375 {REF} {Length: 4775} {TRANSSPLICED} {Human: ENSG00000120008, WDR11, WD repeat domain 11, [RH, Score=538, Expect=3e-169]} {Mouse: ENSMUSG00000042055, Wdr11, WD repeat domain 11, [RH, Score=537, Expect=5e-169]} {Celegans: WBGene00022459, Y110A7A.9, [RH, Score=151, Expect=9e-37]} {Smed: dd_Smed_v6_6888_0_1, dd_Smed_v6_6888_0_1, [RH, Score=397, Expect=1e-117]} {RNA1509_30442, RNA1509_6576} {RNA1310_1823.1, RNA1509_30442, RNA1509_6576} {RNA1509_30442, RNA1509_6576, RNA815_15886}
10. MligTC455_37964 3298 68.72 Mlig455_056045

Neo: -

Age: logFC(26M/2M)=1.465

 HSD17B4 0.963 - - - 0.963 - - Mlig455_056045 {REF} {Length: 2688} {Pfam: short chain dehydrogenase [PF00106.27, score=134.8]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=112.0]; MaoC like domain [PF01575.21, score=101.4]; SCP-2 sterol transfer family [PF02036.19, score=70.6]; KR domain [PF08659.12, score=53.8]} {Human: ENSG00000133835, HSD17B4, hydroxysteroid 17-beta dehydrogenase 4, [RH, Score=810, Expect=0.0]} {Mouse: ENSMUSG00000024507, Hsd17b4, hydroxysteroid (17-beta) dehydrogenase 4, [RH, Score=781, Expect=0.0]} {Dmel: FBgn0030731, Mfe2, peroxisomal Multifunctional enzyme type 2, [RH, Score=595, Expect=0.0]} {Celegans: WBGene00000991, dhs-28, DeHydrogenases, Short chain, [RH, Score=358, Expect=1e-116]} {Smed: dd_Smed_v6_5867_0_1, dd_Smed_v6_5867_0_1, [RH, Score=605, Expect=0.0]} {RNA1509_9012} {RNA1310_590.1} {RNA815_2204}
11. MligTC455_43797 2681 55.85 Mlig455_051343

Neo: -

Age: logFC(26M/2M)=0.181

Region-enriched R5: 1.067/0.00046

 SHMT2 0.96 - - - 0.960 - - Mlig455_051343 {REF} {Length: 1803} {TRANSSPLICED} {Pfam: Serine hydroxymethyltransferase [PF00464.21, score=614.7]} {Human: ENSG00000182199, SHMT2, serine hydroxymethyltransferase 2, [RH, Score=653, Expect=0.0]} {Mouse: ENSMUSG00000025403, Shmt2, serine hydroxymethyltransferase 2 (mitochondrial), [RH, Score=657, Expect=0.0]} {Dmel: FBgn0029823, Shmt, Serine hydroxymethyl transferase, [RH, Score=594, Expect=0.0]} {Celegans: WBGene00003214, mel-32, Serine hydroxymethyltransferase, [RH, Score=567, Expect=0.0]} {Smed: dd_Smed_v6_7793_0_1, dd_Smed_v6_7793_0_1, [RH, Score=638, Expect=0.0]} {RNA1509_15664, RNA1509_23750, RNA1509_31482, RNA1509_4642} {RNA1310_15013, RNA1509_15664, RNA1509_23750, RNA1509_31482, RNA1509_4642} {RNA1509_15664, RNA1509_23750, RNA1509_31482, RNA1509_4642, RNA815_5372}
12. MligTC455_17728 1061 22.09 Mlig455_057691

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-4.029

Region-enriched R6: 1.981/0.02890

 0.959 - - - 0.959 - - Mlig455_057691 {REF} {Length: 717} {RNA1509_20501} {RNA1310_48596} {RNA815_26649}
13. MligTC455_46995 445 9.27 Mlig455_039509

Neo: -

Age: logFC(26M/2M)=0.375

 USB1 0.958 - - - 0.958 - - Mlig455_039509 {REF} {Length: 2185} {TRANSSPLICED} {Pfam: Uncharacterised conserved protein [PF09749.11, score=128.8]} {Human: ENSG00000103005, USB1, U6 snRNA biogenesis phosphodiesterase 1, [RH, Score=115, Expect=2e-30]} {Mouse: ENSMUSG00000031792, Usb1, U6 snRNA biogenesis 1, [RH, Score=120, Expect=2e-32]} {Dmel: FBgn0037713, CG16790, [RH, Score=120, Expect=1e-32]} {RNA1509_23851} {RNA1310_12885.1} {RNA815_5897}
14. MligTC455_39617 769 16.01 Mlig455_036806, Mlig455_053012

Neo: -

Age: Up-Down-Up

Region-enriched R4: 2.409/0.00175
Region-enriched R5: 1.491/0.00693

 MPP6 0.957 - - - 0.957 - -

Mlig455_036806 {REF} {Length: 3138} {TRANSSPLICED} {Pfam: Guanylate kinase [PF00625.23, score=125.6]; Variant SH3 domain [PF07653.19, score=34.8]; SH3 domain [PF00018.30, score=29.1]; PDZ domain [PF00595.26, score=28.2]; L27 domain [PF02828.18, score=23.9]; Variant SH3 domain [PF14604.8, score=22.6]; PDZ domain [PF17820.3, score=21.5]; AAA ATPase domain [PF13191.8, score=21.1]} {Human: ENSG00000105926, MPP6, membrane palmitoylated protein 6, [RH, Score=345, Expect=1e-112]} {Mouse: ENSMUSG00000038388, Mpp6, membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6), [Score=357, Expect=8e-116]; ENSMUSG00000017314, Mpp2, membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2), [Score=340, Expect=8e-109]} {Dmel: FBgn0250785, vari, varicose, [RH, Score=325, Expect=9e-103]} {Celegans: WBGene00002991, lin-2, [Score=273, Expect=4e-83]} {Smed: dd_Smed_v6_5287_0_1, dd_Smed_v6_5287_0_1, [RH, Score=414, Expect=2e-137]} {RNA1509_20995} {RNA1310_12223.1} {RNA815_10039}

Mlig455_053012 {REF} {Length: 2899} {TRANSSPLICED} {Pfam: Guanylate kinase [PF00625.23, score=122.9]; Variant SH3 domain [PF07653.19, score=34.8]; SH3 domain [PF00018.30, score=29.1]; PDZ domain [PF00595.26, score=28.2]; Variant SH3 domain [PF14604.8, score=22.6]; L27 domain [PF02828.18, score=21.8]; PDZ domain [PF17820.3, score=21.5]; AAA ATPase domain [PF13191.8, score=21.4]} {Human: ENSG00000105926, MPP6, membrane palmitoylated protein 6, [RH, Score=343, Expect=5e-112]} {Mouse: ENSMUSG00000038388, Mpp6, membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6), [Score=355, Expect=4e-115]; ENSMUSG00000017314, Mpp2, membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2), [Score=338, Expect=3e-108]} {Dmel: FBgn0250785, vari, varicose, [RH, Score=323, Expect=6e-102]} {Celegans: WBGene00002991, lin-2, [Score=271, Expect=2e-82]} {Smed: dd_Smed_v6_5287_0_1, dd_Smed_v6_5287_0_1, [RH, Score=412, Expect=1e-136]} {RNA1509_20995, RNA1509_43681} {RNA1310_12223.1, RNA1509_20995, RNA1509_43681} {RNA1509_20995, RNA1509_43681, RNA815_10039}
15. MligTC455_12238 249 5.18 Mlig455_015512

Neo: Irradiation

Age: logFC(26M/2M)=-0.488

Regeneration-upregulated R5: 2.536

Regeneration-enriched R5: 2.536

 PDP2 0.956 - - - 0.956 - - Mlig455_015512 {REF} {Length: 2946} {Pfam: Protein phosphatase 2C [PF00481.23, score=58.2]} {Human: ENSG00000172840, PDP2, pyruvate dehyrogenase phosphatase catalytic subunit 2, [Score=99.4, Expect=2e-21]; ENSG00000164951, PDP1, pyruvate dehyrogenase phosphatase catalytic subunit 1, [Score=96.7, Expect=1e-20]} {Mouse: ENSMUSG00000049225, Pdp1, pyruvate dehyrogenase phosphatase catalytic subunit 1, [Score=97.1, Expect=8e-21]} {Dmel: FBgn0029958, Pdp, Pyruvate dehydrogenase phosphatase, [Score=108, Expect=6e-25]} {Celegans: WBGene00022832, pdp-1, Pyruvate Dehydrogenase Phosphatase homolog, [Score=94.0, Expect=2e-20]} {Smed: dd_Smed_v6_4201_0_1, dd_Smed_v6_4201_0_1, [Score=119, Expect=4e-30]} {RNA1509_39535, RNA1509_40467, RNA1509_48674} {RNA1310_14443, RNA1509_39535, RNA1509_40467, RNA1509_48674} {RNA1509_39535, RNA1509_40467, RNA1509_48674, RNA815_18993}
16. MligTC455_12246 99 2.06 Mlig455_019154

Neo: -

Age: Down-Up-Down

 0.956 - - - 0.956 - - Mlig455_019154 {REF} {Length: 1143} {TRANSSPLICED} {RNA1509_36850, RNA1509_7400} {RNA1310_49234, RNA1509_36850} {RNA1509_36850, RNA815_19043.1}
17. MligTC455_44989 6960 145 Mlig455_069324

Neo: -

Age: logFC(26M/2M)=0.260

Region-enriched R4: 1.074/0.01168

 GYG1 0.956 - - - 0.956 - - Mlig455_069324 {REF} {Length: 3749} {TRANSSPLICED} {Pfam: Glycosyl transferase family 8 [PF01501.22, score=86.9]; Nucleotide-diphospho-sugar transferase [PF03407.18, score=19.4]} {Human: ENSG00000163754, GYG1, glycogenin 1, [RH, Score=306, Expect=7e-99]} {Mouse: ENSMUSG00000019528, Gyg, glycogenin, [RH, Score=311, Expect=2e-100]} {Dmel: FBgn0265191, Glycogenin, [RH, Score=303, Expect=1e-93]} {Celegans: WBGene00006863, gyg-1, Glycogenin-1, [RH, Score=258, Expect=1e-79]} {Smed: dd_Smed_v6_647_1_1, dd_Smed_v6_647_1_1, [RH, Score=362, Expect=2e-121]} {RNA1509_31124, RNA1509_511} {RNA1310_1979.3, RNA1509_31124} {RNA1509_31124, RNA815_13036.1}
18. MligTC455_38979 1154 24.04 Mlig455_045102

Neo: Neoblast

Age: -

 AHSA1 0.954 - - - 0.954 - - Mlig455_045102 {REF} {Length: 2273} {TRANSSPLICED} {Pfam: Activator of Hsp90 ATPase, N-terminal [PF09229.13, score=115.5]; Activator of Hsp90 ATPase homolog 1-like protein [PF08327.13, score=79.1]} {Human: ENSG00000100591, AHSA1, activator of HSP90 ATPase activity 1, [RH, Score=313, Expect=7e-105]} {Mouse: ENSMUSG00000021037, Ahsa1, AHA1, activator of heat shock protein ATPase 1, [RH, Score=308, Expect=2e-103]} {Dmel: FBgn0032961, CG1416, [RH, Score=303, Expect=2e-101]} {Celegans: WBGene00007235, C01G10.8, [RH, Score=249, Expect=2e-80]} {Smed: dd_Smed_v6_2497_0_1, dd_Smed_v6_2497_0_1, [RH, Score=333, Expect=3e-113]} {RNA1509_27525, RNA1509_39897, RNA1509_51706, RNA1509_5354} {RNA1310_19210.1, RNA1509_27525, RNA1509_39897, RNA1509_51706, RNA1509_5354} {RNA1509_27525, RNA1509_39897, RNA1509_51706, RNA1509_5354, RNA815_6399}
19. MligTC455_48967 1796 37.42 Mlig455_068354

Neo: -

Age: logFC(26M/2M)=-0.841

Region-enriched R4: 1.450/0.00260

 0.952 - - - 0.952 - - Mlig455_068354 {REF} {Length: 783} {TRANSSPLICED} {Pfam: Type III secretion system lipoprotein chaperone (YscW) [PF09619.12, score=24.6]} {RNA1509_11772, RNA1509_15434, RNA1509_52356} {RNA1310_19739.1, RNA1509_11772, RNA1509_15434, RNA1509_52356} {RNA1509_11772, RNA1509_15434, RNA1509_52356, RNA815_20380}
20. MligTC455_17727 4189 87.27 Mlig455_057688, Mlig455_059984

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.941

Region-enriched R6: 2.088/0.01181
Region-enriched R5: 1.460/0.04298

 0.951 - - - 0.951 - -

Mlig455_057688 {REF} {Length: 980} {RNA1509_889} {RNA1310_48596} {RNA815_26649}

Mlig455_059984 {REF} {Length: 988} {RNA1509_14511, RNA1509_20501, RNA1509_889} {RNA1310_48596, RNA1509_14511, RNA1509_20501, RNA1509_889} {RNA1509_14511, RNA1509_20501, RNA1509_889, RNA815_26649}
21. MligTC455_38511 431 8.97 Mlig455_014820

Neo: -

Age: -

Region-enriched R4: 1.490/0.03205

 PHKB 0.95 - - - 0.950 - - Mlig455_014820 {REF} {Length: 4982} {TRANSSPLICED} {Pfam: Glycosyl hydrolases family 15 [PF00723.23, score=262.7]; Phosphorylase b kinase C-terminal domain [PF19292.1, score=57.4]} {Human: ENSG00000102893, PHKB, phosphorylase kinase regulatory subunit beta, [RH, Score=724, Expect=0.0]} {Mouse: ENSMUSG00000036879, Phkb, phosphorylase kinase beta, [RH, Score=713, Expect=0.0]} {Dmel: FBgn0031995, CG8475, [RH, Score=721, Expect=0.0]} {Celegans: WBGene00022059, Y67D8A.2, [RH, Score=638, Expect=0.0]} {Smed: dd_Smed_v6_3657_0_1, dd_Smed_v6_3657_0_1, [RH, Score=934, Expect=0.0]} {RNA1509_31508, RNA1509_42738, RNA1509_48358, RNA1509_52168, RNA1509_52652} {RNA1310_3293, RNA1509_31508, RNA1509_42738, RNA1509_48358, RNA1509_52168, RNA1509_52652} {RNA1509_31508, RNA1509_42738, RNA1509_48358, RNA1509_52168, RNA1509_52652, RNA815_960}
22. MligTC455_41002 233 4.84 Mlig455_022813

Neo: -

Age: -

 PNPLA2 0.95 - - - 0.950 - - Mlig455_022813 {REF} {Length: 4359} {TRANSSPLICED} {Pfam: Patatin-like phospholipase [PF01734.24, score=37.5]} {Human: ENSG00000177666, PNPLA2, patatin like phospholipase domain containing 2, [RH, Score=206, Expect=8e-59]} {Mouse: ENSMUSG00000025509, Pnpla2, patatin-like phospholipase domain containing 2, [RH, Score=203, Expect=4e-58]} {Dmel: FBgn0036449, bmm, brummer, [RH, Score=247, Expect=5e-74]} {Celegans: WBGene00015484, atgl-1, Patanin-like phospholipase domain-containing protein, [RH, Score=188, Expect=3e-51]} {Smed: dd_Smed_v6_9544_0_1, dd_Smed_v6_9544_0_1, [RH, Score=224, Expect=1e-65]} {RNA1509_22408, RNA1509_31645} {RNA1310_13835, RNA1509_22408, RNA1509_31645} {RNA1509_22408, RNA1509_31645, RNA815_4510}
23. MligTC455_47137 1792 37.33 Mlig455_044379

Neo: -

Age: -

Region-enriched R3: 2.390/0.00000

 SLC5A11 0.95 - - - 0.950 - - Mlig455_044379 {REF} {Length: 3271} {Pfam: Sodium:solute symporter family [PF00474.19, score=378.5]} {Human: ENSG00000158865, SLC5A11, solute carrier family 5 member 11, [RH, Score=524, Expect=1e-178]} {Mouse: ENSMUSG00000028544, Slc5a9, solute carrier family 5 (sodium/glucose cotransporter), member 9, [Score=533, Expect=0.0]; ENSMUSG00000030769, Slc5a11, solute carrier family 5 (sodium/glucose cotransporter), member 11, [Score=530, Expect=0.0]; ENSMUSG00000030781, Slc5a2, solute carrier family 5 (sodium/glucose cotransporter), member 2, [Score=512, Expect=2e-174]} {Dmel: FBgn0035293, CG5687, [Score=74.7, Expect=1e-13]} {Celegans: WBGene00014092, ZK822.5, [Score=74.3, Expect=1e-13]} {Smed: dd_Smed_v6_6663_0_1, dd_Smed_v6_6663_0_1, [Score=518, Expect=6e-177]} {RNA1509_21584, RNA1509_2442, RNA1509_51017} {RNA1310_8599.1, RNA1509_21584, RNA1509_2442, RNA1509_51017} {RNA1509_21584, RNA1509_2442, RNA1509_51017, RNA815_2477.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA