Data search


search
Exact
Search

Results for MligTC455_31322

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_31322 155 3.24 Mlig455_051441

Neo: -

Age: -

Mlig455_051441 {REF} {Length: 1909} {TRANSSPLICED} {RNA1509_14413} {RNA1310_10720.1} {RNA815_3565}

Cumulative graph for MligTC455_31322

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.625 2.268 0.77591 1.00000
RegionR2 0.752 2.268 0.51542 0.89174
RegionR3 -0.206 2.268 0.82689 1.00000
RegionR4 -1.713 2.268 0.15203 0.40336
RegionR5 -0.884 2.268 0.29214 0.62432
RegionR6 -0.148 2.268 0.86965 1.00000
RegionR7 0.07 2.268 0.94370 1.00000
RegionR8 1.505 2.268 0.22233 0.82996

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.486 2.268 0.85519 1.00000
RegenerationR2 0.781 2.268 0.40086 0.81480
RegenerationR3 0.494 2.268 0.65128 0.92962
RegenerationR4 0.243 2.268 0.83044 0.99765
RegenerationR5 0.308 2.268 0.75893 0.97514
RegenerationR6 -0.555 2.268 0.60981 0.87409
RegenerationBL -0.926 2.268 0.51293 0.87639
RegenerationTP -1.29 2.268 0.35473 0.79615


Genes with expression patterns similar to MligTC455_31322

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_31322 155 3.24 Mlig455_051441

Neo: -

Age: -

5 1.000 1.000 1.000 - 1.000 1.000 Mlig455_051441 {REF} {Length: 1909} {TRANSSPLICED} {RNA1509_14413} {RNA1310_10720.1} {RNA815_3565}
2. MligTC455_45218 304 6.34 Mlig455_035420

Neo: -

Age: Down-Up-Down

1.707 - - 0.740 - - 0.967 Mlig455_035420 {REF} {Length: 2939} {Celegans: WBGene00009391, F35C5.3, [Score=57.8, Expect=6e-09]} {RNA1509_47707, RNA1509_52112} {RNA1310_25873, RNA1509_47707, RNA1509_52112} {RNA1509_47707, RNA1509_52112, RNA815_11232.2}
3. MligTC455_44046 903 18.81 Mlig455_001040, Mlig455_064249

Neo: -

Age: logFC(26M/2M)=-0.399

CCDC17 0.976 - - - - - 0.976

Mlig455_001040 {REF} {Length: 4786} {TRANSSPLICED} {Human: ENSG00000159588, CCDC17, coiled-coil domain containing 17, [RH, Score=109, Expect=8e-24]} {Mouse: ENSMUSG00000034035, Ccdc17, coiled-coil domain containing 17, [RH, Score=104, Expect=2e-22]} {Smed: dd_Smed_v6_14654_0_1, dd_Smed_v6_14654_0_1, [RH, Score=486, Expect=1e-148]} {RNA1509_31781} {RNA1310_2813.2} {RNA815_3640}

Mlig455_064249 {REF} {Length: 4754} {TRANSSPLICED} {Human: ENSG00000159588, CCDC17, coiled-coil domain containing 17, [RH, Score=109, Expect=7e-24]} {Mouse: ENSMUSG00000034035, Ccdc17, coiled-coil domain containing 17, [RH, Score=104, Expect=2e-22]} {Smed: dd_Smed_v6_14654_0_1, dd_Smed_v6_14654_0_1, [RH, Score=494, Expect=8e-152]} {RNA1509_31781} {RNA1310_2813.2} {RNA815_3640}
4. MligTC455_06771 280 5.84 Mlig455_054724

Neo: -

Age: -

MGLL 0.973 - - - - 0.973 - Mlig455_054724 {REF} {Length: 3221} {TRANSSPLICED} {Pfam: Serine aminopeptidase, S33 [PF12146.10, score=191.6]; Alpha/beta hydrolase family [PF12697.9, score=47.8]; alpha/beta hydrolase fold [PF00561.22, score=41.3]; Prolyl oligopeptidase family [PF00326.23, score=33.5]; Putative esterase [PF00756.22, score=31.3]; Thioesterase domain [PF00975.22, score=25.4]; Lipase (class 3) [PF01764.27, score=19.6]} {Human: ENSG00000074416, MGLL, monoglyceride lipase, [Score=129, Expect=5e-35]} {Mouse: ENSMUSG00000033174, Mgll, monoglyceride lipase, [Score=128, Expect=1e-34]} {Smed: dd_Smed_v6_10155_0_1, dd_Smed_v6_10155_0_1, [RH, Score=122, Expect=5e-33]} {RNA1509_55402} {RNA1310_27612.1} {RNA815_14060.1}
5. MligTC455_25530 1042 21.71 Mlig455_035413

Neo: -

Age: logFC(26M/2M)=0.450

LHFPL3 0.963 - - - - - 0.963 Mlig455_035413 {REF} {Length: 1696} {TRANSSPLICED} {Pfam: Lipoma HMGIC fusion partner-like protein [PF10242.11, score=156.0]; PMP-22/EMP/MP20/Claudin family [PF00822.22, score=20.9]} {Human: ENSG00000187416, LHFPL3, LHFPL tetraspan subfamily member 3, [RH, Score=181, Expect=4e-56]; ENSG00000156959, LHFPL4, LHFPL tetraspan subfamily member 4, [RH, Score=176, Expect=6e-54]} {Mouse: ENSMUSG00000106379, Lhfpl3, lipoma HMGIC fusion partner-like 3, [RH, Score=181, Expect=2e-56]; ENSMUSG00000042873, Lhfpl4, lipoma HMGIC fusion partner-like protein 4, [RH, Score=177, Expect=3e-54]} {Dmel: FBgn0262624, Tmhs, Tetraspan membrane protein in hair cell stereocilia, [RH, Score=147, Expect=8e-43]} {RNA1509_37681, RNA1509_43915, RNA1509_4945, RNA1509_53655} {RNA1310_17914, RNA1509_37681, RNA1509_43915, RNA1509_53655} {RNA1509_37681, RNA1509_43915, RNA1509_53655, RNA815_7326.1}
6. MligTC455_53181 2612 54.42 Mlig455_061859

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=0.238

XIRP2 0.962 - - - - - 0.962 Mlig455_061859 {REF} {Length: 3582} {TRANSSPLICED} {Pfam: LIM domain [PF00412.24, score=43.4]} {Human: ENSG00000163092, XIRP2, xin actin binding repeat containing 2, [RH, Score=99.4, Expect=1e-20]} {Mouse: ENSMUSG00000027022, Xirp2, xin actin-binding repeat containing 2, [RH, Score=98.2, Expect=3e-20]} {Dmel: FBgn0063485, Lasp, [Score=57.4, Expect=4e-08]} {Smed: dd_Smed_v6_4138_0_1, dd_Smed_v6_4138_0_1, [Score=107, Expect=2e-25]} {RNA1509_6699} {RNA1310_12435} {RNA815_1836.1}
7. MligTC455_53955 385 8.01 Mlig455_016192

Neo: -

Age: -

Region-enriched R2: 2.185/0.00203

TMEM216 0.961 - - - - - 0.961 Mlig455_016192 {REF} {Length: 1165} {TRANSSPLICED} {Pfam: Predicted membrane protein [PF09799.11, score=85.0]} {Human: ENSG00000187049, TMEM216, transmembrane protein 216, [RH, Score=61.2, Expect=7e-12]} {Mouse: ENSMUSG00000024667, Tmem216, transmembrane protein 216, [RH, Score=63.9, Expect=3e-13]} {Dmel: FBgn0037615, CG11760, [RH, Score=63.2, Expect=6e-13]} {Smed: dd_Smed_v6_14636_0_1, dd_Smed_v6_14636_0_1, [RH, Score=82.4, Expect=1e-20]} {RNA1509_39699, RNA1509_53860} {RNA1310_30237, RNA1509_39699, RNA1509_53860} {RNA1509_39699, RNA1509_53860, RNA815_653}
8. MligTC455_53182 2593 54.01 Mlig455_061866

Neo: -

Age: Down-Down-Up

XIRP2 0.959 - - - - - 0.959 Mlig455_061866 {REF} {Length: 3831} {TRANSSPLICED} {Pfam: LIM domain [PF00412.24, score=43.3]} {Human: ENSG00000163092, XIRP2, xin actin binding repeat containing 2, [RH, Score=99.0, Expect=1e-20]} {Mouse: ENSMUSG00000027022, Xirp2, xin actin-binding repeat containing 2, [RH, Score=95.9, Expect=1e-19]} {Dmel: FBgn0063485, Lasp, [Score=57.0, Expect=6e-08]} {Smed: dd_Smed_v6_4138_0_1, dd_Smed_v6_4138_0_1, [Score=105, Expect=9e-25]} {RNA1509_6699} {RNA1310_12435} {RNA815_1836.1}
9. MligTC455_19337 1925 40.11 Mlig455_019013, Mlig455_055690

Neo: -

Age: -

FAT4 0.956 - - - - - 0.956

Mlig455_019013 {REF} {Length: 5843} {Pfam: Cadherin domain [PF00028.19, score=416.2]; Cadherin-like [PF16184.7, score=51.1]; Cadherin-like [PF08266.14, score=37.4]} {Human: ENSG00000196159, FAT4, FAT atypical cadherin 4, [Score=337, Expect=8e-93]; ENSG00000107736, CDH23, cadherin related 23, [Score=323, Expect=3e-88]} {Mouse: ENSMUSG00000046743, Fat4, FAT atypical cadherin 4, [Score=340, Expect=7e-94]} {Dmel: FBgn0037963, Cad87A, Cadherin 87A, [RH, Score=565, Expect=1e-169]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=224, Expect=2e-58]} {Smed: dd_Smed_v6_15356_0_1, dd_Smed_v6_15356_0_1, [Score=285, Expect=1e-77]} {RNA1509_10894, RNA1509_28143} {RNA1310_769, RNA1509_10894, RNA1509_28143} {RNA1509_10894, RNA1509_28143, RNA815_221.1}

Mlig455_055690 {REF} {Length: 5861} {Pfam: Cadherin domain [PF00028.19, score=416.3]; Cadherin-like [PF16184.7, score=51.2]; Cadherin-like [PF08266.14, score=37.1]} {Human: ENSG00000196159, FAT4, FAT atypical cadherin 4, [Score=339, Expect=2e-93]; ENSG00000107736, CDH23, cadherin related 23, [Score=328, Expect=8e-90]} {Mouse: ENSMUSG00000046743, Fat4, FAT atypical cadherin 4, [Score=345, Expect=3e-95]} {Dmel: FBgn0037963, Cad87A, Cadherin 87A, [RH, Score=561, Expect=2e-168]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=221, Expect=1e-57]} {Smed: dd_Smed_v6_15356_0_1, dd_Smed_v6_15356_0_1, [Score=278, Expect=3e-75]} {RNA1509_28056, RNA1509_38617, RNA1509_4473} {RNA1310_769, RNA1509_28056, RNA1509_38617, RNA1509_4473} {RNA1509_28056, RNA1509_38617, RNA1509_4473, RNA815_221.1}
10. MligTC455_29557 797 16.6 Mlig455_040172

Neo: -

Age: logFC(26M/2M)=-0.290

TMEM67 0.956 - - - - - 0.956 Mlig455_040172 {REF} {Length: 3157} {Pfam: Meckelin (Transmembrane protein 67) [PF09773.11, score=669.0]} {Human: ENSG00000164953, TMEM67, transmembrane protein 67, [Score=437, Expect=1e-140]} {Mouse: ENSMUSG00000049488, Tmem67, transmembrane protein 67, [Score=429, Expect=1e-136]} {Dmel: FBgn0038814, CG15923, [Score=139, Expect=9e-34]} {Celegans: WBGene00018042, mks-3, MecKel-Gruber Syndrome (MKS) homolog, [Score=278, Expect=2e-81]} {Smed: dd_Smed_v6_7765_0_1, dd_Smed_v6_7765_0_1, [Score=476, Expect=9e-156]} {RNA1509_26795, RNA1509_3205, RNA1509_40554} {RNA1310_2827.1, RNA1509_26795, RNA1509_40554} {RNA1509_26795, RNA1509_40554, RNA815_833}
11. MligTC455_38543 146 3.03 Mlig455_017595

Neo: -

Age: -

Region-enriched R3: 2.925/0.03259

0.95 - - - - - 0.950 Mlig455_017595 {REF} {Length: 1878} {RNA1310_40211} {RNA815_8698}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA