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Results for MligTC455_29557

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_29557 797 16.60 Mlig455_040172

Neo: -

Age: logFC(26M/2M)=-0.290

 TMEM67 Mlig455_040172 {REF} {Length: 3157} {Pfam: Meckelin (Transmembrane protein 67) [PF09773.11, score=669.0]} {Human: ENSG00000164953, TMEM67, transmembrane protein 67, [Score=437, Expect=1e-140]} {Mouse: ENSMUSG00000049488, Tmem67, transmembrane protein 67, [Score=429, Expect=1e-136]} {Dmel: FBgn0038814, CG15923, [Score=139, Expect=9e-34]} {Celegans: WBGene00018042, mks-3, MecKel-Gruber Syndrome (MKS) homolog, [Score=278, Expect=2e-81]} {Smed: dd_Smed_v6_7765_0_1, dd_Smed_v6_7765_0_1, [Score=476, Expect=9e-156]} {RNA1509_26795, RNA1509_3205, RNA1509_40554} {RNA1310_2827.1, RNA1509_26795, RNA1509_40554} {RNA1509_26795, RNA1509_40554, RNA815_833}

Cumulative graph for MligTC455_29557

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.607 4.367 0.22752 0.87162
RegionR2 1.164 4.367 0.01824 0.14443
RegionR3 0.366 4.367 0.39769 0.92717
RegionR4 0.248 4.367 0.61452 0.92532
RegionR5 -0.513 4.367 0.25604 0.57445
RegionR6 0.269 4.367 0.54034 1.00000
RegionR7 0.28 4.367 0.59952 1.00000
RegionR8 -0.207 4.367 0.77979 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -6.204 4.367 0.21920 0.95476
RegenerationR2 -0.166 4.367 0.68856 0.95205
RegenerationR3 0.081 4.367 0.86025 1.00000
RegenerationR4 0.086 4.367 0.85386 1.00000
RegenerationR5 0.965 4.367 0.03591 0.31422
RegenerationR6 -0.302 4.367 0.53490 0.83004
RegenerationBL 0.53 4.367 0.29072 0.65268
RegenerationTP 0.281 4.367 0.63126 0.97813


Genes with expression patterns similar to MligTC455_29557

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_29557 797 16.6 Mlig455_040172

Neo: -

Age: logFC(26M/2M)=-0.290

 TMEM67 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_040172 {REF} {Length: 3157} {Pfam: Meckelin (Transmembrane protein 67) [PF09773.11, score=669.0]} {Human: ENSG00000164953, TMEM67, transmembrane protein 67, [Score=437, Expect=1e-140]} {Mouse: ENSMUSG00000049488, Tmem67, transmembrane protein 67, [Score=429, Expect=1e-136]} {Dmel: FBgn0038814, CG15923, [Score=139, Expect=9e-34]} {Celegans: WBGene00018042, mks-3, MecKel-Gruber Syndrome (MKS) homolog, [Score=278, Expect=2e-81]} {Smed: dd_Smed_v6_7765_0_1, dd_Smed_v6_7765_0_1, [Score=476, Expect=9e-156]} {RNA1509_26795, RNA1509_3205, RNA1509_40554} {RNA1310_2827.1, RNA1509_26795, RNA1509_40554} {RNA1509_26795, RNA1509_40554, RNA815_833}
2. MligTC455_44678 1404 29.25 Mlig455_003572

Neo: -

Age: logFC(26M/2M)=-0.384

Region-enriched R2: 1.099/0.01840

 CATIP 3.274 - 0.723 0.849 0.744 0.958 - Mlig455_003572 {REF} {Length: 2966} {Human: ENSG00000158428, CATIP, ciliogenesis associated TTC17 interacting protein, [RH, Score=241, Expect=1e-75]} {Mouse: ENSMUSG00000073650, Catip, ciliogenesis associated TTC17 interacting protein, [RH, Score=202, Expect=5e-60]} {Smed: dd_Smed_v6_5952_0_4, dd_Smed_v6_5952_0_4, [RH, Score=307, Expect=1e-101]} {RNA1509_33318, RNA1509_4430} {RNA1310_17964, RNA1509_33318, RNA1509_4430} {RNA1509_33318, RNA1509_4430, RNA815_14802}
3. MligTC455_21323 1708 35.59 Mlig455_017330

Neo: -

Age: Down-Up-Up

 RIIAD1 2.594 0.950 0.831 - - 0.813 - Mlig455_017330 {REF} {Length: 587} {TRANSSPLICED} {Human: ENSG00000178796, RIIAD1, regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1, [RH, Score=86.7, Expect=6e-23]} {Mouse: ENSMUSG00000028139, Riiad1, regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1, [RH, Score=87.4, Expect=5e-23]} {Smed: dd_Smed_v6_4716_0_2, dd_Smed_v6_4716_0_2, [RH, Score=124, Expect=8e-38]} {RNA1509_4188} {RNA1310_57362} {RNA815_29384.1}
4. MligTC455_43588 1419 29.57 Mlig455_002159, Mlig455_002304

Neo: -

Age: logFC(26M/2M)=0.283

Region-enriched R4: 2.039/0.00360

 CYP2J2 2.59 0.952 0.788 - - 0.850 -

Mlig455_002159 {REF} {Length: 1922} {TRANSSPLICED} {Pfam: Cytochrome P450 [PF00067.24, score=324.8]} {Human: ENSG00000134716, CYP2J2, cytochrome P450 family 2 subfamily J member 2, [Score=194, Expect=3e-55]; ENSG00000138061, CYP1B1, cytochrome P450 family 1 subfamily B member 1, [Score=188, Expect=8e-53]} {Mouse: ENSMUSG00000003555, Cyp17a1, cytochrome P450, family 17, subfamily a, polypeptide 1, [RH, Score=197, Expect=2e-56]} {Dmel: FBgn0004959, phm, Peptidylglycine-alpha-hydroxylating monooxygenase, [Score=143, Expect=2e-36]} {Celegans: WBGene00016697, cyp-33C2, CYtochrome P450 family, [Score=160, Expect=3e-43]} {Smed: dd_Smed_v6_3919_0_1, dd_Smed_v6_3919_0_1, [Score=156, Expect=8e-42]} {RNA1509_5363} {RNA1310_11839} {RNA815_5371}

Mlig455_002304 {REF} {Length: 2481} {TRANSSPLICED} {Pfam: Cytochrome P450 [PF00067.24, score=324.8]} {Human: ENSG00000134716, CYP2J2, cytochrome P450 family 2 subfamily J member 2, [Score=194, Expect=3e-55]; ENSG00000138061, CYP1B1, cytochrome P450 family 1 subfamily B member 1, [Score=188, Expect=8e-53]} {Mouse: ENSMUSG00000003555, Cyp17a1, cytochrome P450, family 17, subfamily a, polypeptide 1, [RH, Score=197, Expect=2e-56]} {Dmel: FBgn0004959, phm, Peptidylglycine-alpha-hydroxylating monooxygenase, [Score=143, Expect=2e-36]} {Celegans: WBGene00016697, cyp-33C2, CYtochrome P450 family, [Score=160, Expect=3e-43]} {Smed: dd_Smed_v6_3919_0_1, dd_Smed_v6_3919_0_1, [Score=156, Expect=8e-42]} {RNA1509_5363} {RNA1310_11839, RNA1509_5363} {RNA1509_5363, RNA815_5371}
5. MligTC455_44679 1192 24.82 Mlig455_015484

Neo: -

Age: -

 CATIP 2.547 - - 0.833 0.745 0.969 - Mlig455_015484 {REF} {Length: 1772} {Human: ENSG00000158428, CATIP, ciliogenesis associated TTC17 interacting protein, [RH, Score=235, Expect=2e-73]} {Mouse: ENSMUSG00000073650, Catip, ciliogenesis associated TTC17 interacting protein, [RH, Score=199, Expect=1e-58]} {Smed: dd_Smed_v6_5952_0_4, dd_Smed_v6_5952_0_4, [RH, Score=307, Expect=6e-102]} {RNA1509_4430} {RNA1310_17964} {RNA815_14802}
6. MligTC455_45222 576 11.99 Mlig455_003815

Neo: -

Age: Up-Down-Up

 USP40 1.861 0.965 - - - 0.896 - Mlig455_003815 {REF} {Length: 4401} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=135.1]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=59.5]} {Human: ENSG00000085982, USP40, ubiquitin specific peptidase 40, [RH, Score=325, Expect=3e-92]} {Mouse: ENSMUSG00000005501, Usp40, ubiquitin specific peptidase 40, [RH, Score=315, Expect=1e-88]} {Dmel: FBgn0016756, Usp47, Ubiquitin specific protease 47, [Score=161, Expect=1e-39]} {Celegans: WBGene00011507, T05H10.1, Ubiquitin carboxyl-terminal hydrolase, [RH, Score=178, Expect=5e-45]} {Smed: dd_Smed_v6_7459_0_1, dd_Smed_v6_7459_0_1, [Score=166, Expect=2e-41]} {RNA1509_2877, RNA1509_48092} {RNA1310_1562.1, RNA1509_48092} {RNA1509_48092, RNA815_508}
7. MligTC455_25530 1042 21.71 Mlig455_035413

Neo: -

Age: logFC(26M/2M)=0.450

 LHFPL3 1.786 - 0.836 - - - 0.950 Mlig455_035413 {REF} {Length: 1696} {TRANSSPLICED} {Pfam: Lipoma HMGIC fusion partner-like protein [PF10242.11, score=156.0]; PMP-22/EMP/MP20/Claudin family [PF00822.22, score=20.9]} {Human: ENSG00000187416, LHFPL3, LHFPL tetraspan subfamily member 3, [RH, Score=181, Expect=4e-56]; ENSG00000156959, LHFPL4, LHFPL tetraspan subfamily member 4, [RH, Score=176, Expect=6e-54]} {Mouse: ENSMUSG00000106379, Lhfpl3, lipoma HMGIC fusion partner-like 3, [RH, Score=181, Expect=2e-56]; ENSMUSG00000042873, Lhfpl4, lipoma HMGIC fusion partner-like protein 4, [RH, Score=177, Expect=3e-54]} {Dmel: FBgn0262624, Tmhs, Tetraspan membrane protein in hair cell stereocilia, [RH, Score=147, Expect=8e-43]} {RNA1509_37681, RNA1509_43915, RNA1509_4945, RNA1509_53655} {RNA1310_17914, RNA1509_37681, RNA1509_43915, RNA1509_53655} {RNA1509_37681, RNA1509_43915, RNA1509_53655, RNA815_7326.1}
8. MligTC455_47092 605 12.61 Mlig455_022413

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.333

 DENND4A 1.761 0.950 - - - - 0.811 Mlig455_022413 {REF} {Length: 7653} {TRANSSPLICED} {Pfam: DENN (AEX-3) domain [PF02141.23, score=135.9]; uDENN domain [PF03456.20, score=48.2]; dDENN domain [PF03455.21, score=33.4]; Multivesicular body subunit 12 [PF10240.11, score=27.9]} {Human: ENSG00000174485, DENND4A, DENN domain containing 4A, [RH, Score=518, Expect=2e-153]; ENSG00000137145, DENND4C, DENN domain containing 4C, [RH, Score=515, Expect=5e-152]; ENSG00000198837, DENND4B, DENN domain containing 4B, [RH, Score=493, Expect=2e-149]} {Mouse: ENSMUSG00000053641, Dennd4a, DENN/MADD domain containing 4A, [RH, Score=520, Expect=4e-154]; ENSMUSG00000038024, Dennd4c, DENN/MADD domain containing 4C, [RH, Score=498, Expect=5e-146]} {Dmel: FBgn0025864, Crag, Calmodulin-binding protein related to a Rab3 GDP/GTP exchange protein, [RH, Score=478, Expect=1e-140]} {Celegans: WBGene00018681, denn-4, DENN domain type RAB GEF, [RH, Score=443, Expect=1e-129]} {Smed: dd_Smed_v6_2463_0_1, dd_Smed_v6_2463_0_1, [RH, Score=353, Expect=4e-99]} {RNA1509_30397, RNA1509_54564, RNA1509_55790} {RNA1310_724.1, RNA1509_30397, RNA1509_54564, RNA1509_55790} {RNA1509_30397, RNA1509_54564, RNA1509_55790, RNA815_711}
9. MligTC455_50140 250 5.2 Mlig455_034740

Neo: -

Age: logFC(26M/2M)=-0.476

 1.76 0.950 - - 0.810 - - Mlig455_034740 {REF} {Length: 3140} {Pfam: BTB/POZ domain [PF00651.33, score=22.9]} {RNA1509_14555} {RNA1310_9849, RNA1509_14555} {RNA1509_14555, RNA815_9092}
10. MligTC455_40240 1636 34.08 Mlig455_028306

Neo: -

Age: -

Region-enriched R4: 1.764/0.00013

 UBE2U 1.732 - - - - 0.957 0.775 Mlig455_028306 {REF} {Length: 1313} {TRANSSPLICED} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=94.1]} {Human: ENSG00000177414, UBE2U, ubiquitin conjugating enzyme E2 U, [RH, Score=126, Expect=4e-33]} {Mouse: ENSMUSG00000069733, Ube2u, ubiquitin-conjugating enzyme E2U (putative), [RH, Score=114, Expect=1e-28]} {Dmel: FBgn0267383, Ubc87F, Ubiquitin conjugating enzyme 87F, [Score=81.6, Expect=3e-18]} {Celegans: WBGene00006704, ubc-7, Probable ubiquitin-conjugating enzyme E2 7, [Score=81.6, Expect=2e-18]} {Smed: dd_Smed_v6_998_0_1, dd_Smed_v6_998_0_1, [Score=77.0, Expect=9e-17]} {RNA1509_12895} {RNA1310_17637} {RNA815_16983}
11. MligTC455_15898 111 2.32 Mlig455_034780

Neo: -

Age: -

Region-enriched R2: 4.729/0.00758

 STOM 0.976 0.976 - - - - - Mlig455_034780 {REF} {Length: 2617} {Pfam: SPFH domain / Band 7 family [PF01145.27, score=108.6]} {Human: ENSG00000148175, STOM, stomatin, [Score=298, Expect=5e-99]; ENSG00000133115, STOML3, stomatin like 3, [Score=293, Expect=3e-97]} {Mouse: ENSMUSG00000026880, Stom, stomatin, [Score=294, Expect=6e-98]; ENSMUSG00000027744, Stoml3, stomatin (Epb7.2)-like 3, [Score=285, Expect=3e-94]} {Dmel: FBgn0260657, CG42540, [Score=308, Expect=1e-100]} {Celegans: WBGene00006064, sto-2, Stomatin-2, [Score=309, Expect=5e-103]} {Smed: dd_Smed_v6_6562_0_1, dd_Smed_v6_6562_0_1, [RH, Score=389, Expect=5e-134]} {RNA1509_39119} {RNA1310_7313, RNA1509_39119} {RNA1509_39119, RNA815_17831}
12. MligTC455_36285 232 4.84 Mlig455_049585

Neo: -

Age: -

Region-enriched R2: 2.764/0.02680

 SGSM1 0.969 0.969 - - - - - Mlig455_049585 {REF} {Length: 3668} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=117.8]; Rab-binding domain (RBD) [PF12068.10, score=107.7]; RUN domain [PF02759.21, score=79.1]} {Human: ENSG00000167037, SGSM1, small G protein signaling modulator 1, [RH, Score=428, Expect=4e-132]} {Mouse: ENSMUSG00000038351, Sgsm2, small G protein signaling modulator 2, [RH, Score=637, Expect=0.0]} {Dmel: FBgn0031116, CG1695, [RH, Score=432, Expect=5e-133]} {Celegans: WBGene00008018, tbc-8, TBC (Tre-2/Bub2/Cdc16) domain family, [RH, Score=421, Expect=2e-131]} {Smed: dd_Smed_v6_12130_0_1, dd_Smed_v6_12130_0_1, [RH, Score=609, Expect=0.0]} {RNA1509_48678} {RNA1310_9224, RNA1509_48678} {RNA1509_48678, RNA815_14977}
13. MligTC455_41148 341 7.1 Mlig455_060971

Neo: -

Age: -

 0.966 0.966 - - - - - Mlig455_060971 {REF} {Length: 1945} {TRANSSPLICED} {RNA1310_18710.1} {RNA815_9967}
14. MligTC455_43120 247 5.15 Mlig455_025263

Neo: -

Age: Up-Down-Down

 0.963 - - - - 0.963 - Mlig455_025263 {REF} {Length: 4290} {RNA1509_20151} {RNA1310_8688.1} {RNA815_9458.1}
15. MligTC455_44795 953 19.85 Mlig455_013497

Neo: -

Age: -

 LRRC74A 0.958 0.958 - - - - - Mlig455_013497 {REF} {Length: 3050} {Pfam: Leucine Rich repeat [PF13516.8, score=58.5]; EF-hand domain pair [PF13499.8, score=32.4]; EF-hand domain [PF13405.8, score=29.5]; EF hand [PF00036.34, score=27.0]; EF-hand domain pair [PF13833.8, score=23.7]; Leucine Rich repeats (2 copies) [PF12799.9, score=21.6]; EF hand [PF13202.8, score=20.1]} {Human: ENSG00000100565, LRRC74A, leucine rich repeat containing 74A, [Score=125, Expect=4e-30]; ENSG00000187905, LRRC74B, leucine rich repeat containing 74B, [Score=120, Expect=8e-29]} {Mouse: ENSMUSG00000059114, Lrrc74a, leucine rich repeat containing 74A, [Score=132, Expect=1e-32]} {Celegans: WBGene00009201, F28C1.3, Protein phosphatase 1 regulatory subunit 37 homolog, [Score=54.3, Expect=2e-07]} {Smed: dd_Smed_v6_10342_0_1, dd_Smed_v6_10342_0_1, [Score=137, Expect=2e-34]} {RNA1509_9378} {RNA1310_8966} {RNA815_2842}
16. MligTC455_31322 155 3.24 Mlig455_051441

Neo: -

Age: -

 0.956 - - - - - 0.956 Mlig455_051441 {REF} {Length: 1909} {TRANSSPLICED} {RNA1509_14413} {RNA1310_10720.1} {RNA815_3565}
17. MligTC455_19712 82 1.7 Mlig455_000384

Neo: -

Age: -

 0.952 0.952 - - - - - Mlig455_000384 {REF} {Length: 1367} {NoTransDecoderORF} {RNA1310_88029.2} {RNA815_48482}
18. MligTC455_22214 237 4.94 Mlig455_019333, Mlig455_019447

Neo: -

Age: -

 NRG2 0.951 0.951 - - - - -

Mlig455_019333 {REF} {Length: 4291} {Pfam: Immunoglobulin I-set domain [PF07679.18, score=50.5]; Immunoglobulin domain [PF13927.8, score=44.7]; Immunoglobulin domain [PF00047.27, score=43.9]; Immunoglobulin domain [PF13895.8, score=22.0]} {Human: ENSG00000158458, NRG2, neuregulin 2, [RH, Score=86.7, Expect=8e-17]} {Mouse: ENSMUSG00000060275, Nrg2, neuregulin 2, [RH, Score=81.3, Expect=2e-15]} {Dmel: FBgn0005666, bt, bent, [Score=52.0, Expect=2e-06]} {Celegans: WBGene00000289, cam-1, Tyrosine-protein kinase receptor cam-1, [Score=51.2, Expect=3e-06]} {Smed: dd_Smed_v6_15129_0_1, dd_Smed_v6_15129_0_1, [Score=55.1, Expect=9e-08]} {RNA1509_54517} {RNA1310_8322} {RNA815_13786}

Mlig455_019447 {REF} {Length: 4242} {Pfam: Immunoglobulin I-set domain [PF07679.18, score=50.5]; Immunoglobulin domain [PF13927.8, score=44.8]; Immunoglobulin domain [PF00047.27, score=43.9]; Immunoglobulin domain [PF13895.8, score=22.1]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=18.6]} {Human: ENSG00000158458, NRG2, neuregulin 2, [RH, Score=88.6, Expect=2e-17]} {Mouse: ENSMUSG00000060275, Nrg2, neuregulin 2, [RH, Score=83.2, Expect=7e-16]} {Dmel: FBgn0005666, bt, bent, [Score=52.4, Expect=2e-06]} {Celegans: WBGene00000289, cam-1, Tyrosine-protein kinase receptor cam-1, [Score=51.2, Expect=3e-06]} {Smed: dd_Smed_v6_15129_0_1, dd_Smed_v6_15129_0_1, [Score=55.1, Expect=9e-08]} {RNA1509_54517} {RNA1310_8322} {RNA815_13786}
19. MligTC455_42953 403 8.4 Mlig455_052199

Neo: -

Age: -

 0.951 - - - - - 0.951 Mlig455_052199 {REF} {Length: 1556} {TRANSSPLICED} {Pfam: NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial [PF15880.7, score=40.1]} {Mouse: ENSMUSG00000029286, Enam, enamelin, [Score=62.8, Expect=3e-10]} {Dmel: FBgn0029697, CG15570, [Score=58.5, Expect=5e-09]} {RNA1509_10373} {RNA1310_14044.1} {RNA815_9326.1}
20. MligTC455_52918 349 7.27 Mlig455_046988

Neo: -

Age: -

 0.951 - - - - - 0.951 Mlig455_046988 {REF} {Length: 2881} {RNA1509_54215} {RNA1310_36567} {RNA815_10117.1}

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